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PEPC-specific protein kinase : Evaluation of physiological role in C4 photosynthesis and molecular mechanism of regulation

Research Project

Project/Area Number 14390030
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field 広領域
Research InstitutionKyoto University

Principal Investigator

IZUI Katsura  Kyoto University, Graduate School of Biostudy, Professor, 生命科学研究科, 教授 (20025414)

Co-Investigator(Kenkyū-buntansha) FURUMOTO Tsuyoshi  Kyoto University, Graduate School of Biostudy, Assistant Professor, 生命科学研究科, 助手 (30313208)
HISABORI Toru  Tokyo Institute of Technology, Chemical Resources Laboratory, Associate Professor, 資源化学研究所, 助教授 (40181094)
Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥13,100,000 (Direct Cost: ¥13,100,000)
Fiscal Year 2004: ¥2,700,000 (Direct Cost: ¥2,700,000)
Fiscal Year 2003: ¥2,500,000 (Direct Cost: ¥2,500,000)
Fiscal Year 2002: ¥7,900,000 (Direct Cost: ¥7,900,000)
Keywordsphosphoenolpyruvate carboxylas (PEPC). / PEPC kinase / C4 photosynthesis / regulation of enzyme activity by phosphorylation. / recombinant enzyme / ubiquitin / proteasome system / plant transformation / Flaveria / レドックス調節 / ジスルフィド結合 / 一過的発現系 / ユビキチン化 / タンパク質分解調節 / ホスホエノールピルビン酸カルボキシラーゼ / PEPC / プロテインキナーゼ / フラベリア / トウモロコシ / ホスホエノールピルビン酸カルボキチシラーゼ
Research Abstract

Phosphoenolpyruvate carboxylase (PEPC) which catalyses an initial C0_2 fixation reaction in the C4 photosynthetic pathway, is regulated not only by allosteric effect but also by reversible phosphorylation. For this phosphorylation, a protein kinase whose substrate is confined to PEPC is involved. Thus this protein kinase is called PEPC kinase (PEPCk). We firstly had succeeded in the cloning of PEPCk involved in the C4 photosynthesis from a model C4 plant, Flaveria trinervia, and in its prokaryotic expression. By the use of this PEPCk (FtPEPCk) cDNA, we investigated the regulatory mechanisms of this kinase and evaluated its physiological significance. The results obtained are as described below.
1)At least three copies of the PEPCk genes were found on the genome of Flaveria trinervia, and one of the genes was assigned to be involved in the C4 photosynthesis. The gene was expressed not only in leaves but also in other tissues at low levels.
2)The recombinant FtPEPCk could successfully be obtained as a fusion protein with Nus tag protein. Similar to the case with PEPCk from maize (ZmPEPCk), FtPEPCk was also found to be subject to redox regulation. The candidate Cys residues participating in the disulfide bond formation upon oxidation were assigned.
3)Several amino acid residues of PEPC required for the activation by phosphorylation were identified.
4)By the use of protoplasts of mesophyll cells of maize, FtPEPCk with FLAG tag was transiently expressed and its degradation process was monitored. The Involvement of the ubiquitin/proteasome system in the degradation of FtPEPCk was demonstrated.
5)To evaluate the physiological importance of PEPCk in vivo, PEPCk expression was suppressed by the use of an antisense method with Flaveria bidentis which is a transformable C4 plant. The transformants whose PEPC is not significantly phosphorylated were obtained, and its photosynthetic activities are under investigation.

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (44 results)

All 2005 2004 2003 2002 Other

All Journal Article (31 results) Book (3 results) Publications (10 results)

  • [Journal Article] Maize phosphoenolpyruvate carboxylase : Mutations at the putative binding site for glucose 6-phosphate caused desensitization and abolished responsiveness to regulatory phosphorylation2005

    • Author(s)
      Takahashi, Terada A, Kotera M, Oshima K, Furumoto T, Matsumura H, Kai Y, Izui K
    • Journal Title

      J. Biol. Chem. 280

      Pages: 11798-11806

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The ubiquitin-proteosome system is involved in the rapid degradation of phosphoenolpyruvate carboxylase kinase for C4 photosynthesis2005

    • Author(s)
      Agetsuma M, Furumoto T, Ynagisawa S, Izui K
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 389-398

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vascular-tissue abundant expression of plant TAFIO,an ortholo-gous gene for TATA box-binding protein-associated factor 10,in Flaveria trinervia and abnormal morphology of Arabidopsis thaliana transformants on its over-expression2005

    • Author(s)
      Furumoto T, Tamada Y, Nakatani H, lzumida A, Hata S, lzui K
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 108-117

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Maize Phosphoenolpyruvate Carboxylase. Mutations at the Putative Binding Site for Glucose 6-phosphate Caused Desensitization and Abolished Responsiveness to Regulatory Phosphorylation.2005

    • Author(s)
      A.Takahashi-Terada, M.Kotera, K.Ohshima, T.Furumoto, H.Matsumura, Y.Kai, K.Izui.
    • Journal Title

      J Biol Chem. 280

      Pages: 11798-11806

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The Ubiquitin-Proteosome Pathway is Involved in Rapid Degradation of Phosphoenolpyruvate CarboxylaseKinase for C4 Photosynthesis (Rapid Paper)2005

    • Author(s)
      M.Agetsuma, T.Furumoto, S.Yanagisawa, K.Izui
    • Journal Title

      Plant Cell Phsiol. 46

      Pages: 389-398

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Vascular Tissue -Abundant Expression of Plant TAF10, an Orthologous Gene of TATA Box-Binding Protein-Associated Factor 10, in Flaveria Trinervia and Abnormal Morphology of Arabidopsis thaliana Transformants on Its Over-Expression.2005

    • Author(s)
      T.Furumoto, Y.Tamada, A.Izumida, H.Nakatani, S.Hata, K.Izui.
    • Journal Title

      lant Cell Phsiol. 46

      Pages: 108-117

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The ubiquitin-proteosome system is involved in the rapid degradation of phosphoenolpyruvate carboxylase kinase for C4 photosynthes2005

    • Author(s)
      Agetsuma M, Furumoto T, Yanagisawa S, Izui K
    • Journal Title

      Plant Cell Physiol. 46

      Pages: 389-398

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Maize phosphoenolpyruvate carboxylase : Mutations at the putative binding site for glucose 6-phosphate caused desensitization and abolished responsiveness to regulatory phosphorylation2005

    • Author(s)
      Takahashi-Terada A, Kotera M, Oshima K, Furumoto T, Matsumura H, Kai Y, Izui K
    • Journal Title

      J.Biol.Chem. 280

      Pages: 11798-11806

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Phosphoenolpyruvate carboxylase : An era of structural biology2004

    • Author(s)
      Izui K, Matsumura H, Furumoto T, Kai Y
    • Journal Title

      Annu. Rev. Plant Physiol. Mol. Biol. 55

      Pages: 69-84

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Clonig and expression analysis of a MAPKKK gene and a novel nodulin gene of Lotus Japonicus2004

    • Author(s)
      Kinoshita N, 0oki Y, Deguchi Y, Chechetka SA, Kouchi H, Umehara Y, lzui K, Hata S.
    • Journal Title

      Biosci Biotechnol Biochem. 68

      Pages: 1805-1807

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Overexpression of a cyanobacterial phosphoenolpyruvate carboxylase with diminished sensitivity to feedback inhibition in Arabidopsis changes amino acid metabolism2004

    • Author(s)
      Chen L.-MY., lzu K., Kai Y.Li K.-Z., Miwa T, Izui K
    • Journal Title

      Planta 219

      Pages: 440-449

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Phosphoenolpyruvate Carboxylase : A New Era of Structural Biology. (Review)2004

    • Author(s)
      K.Izui, H.Matsumura, T.Furumoto, Y.Kai.
    • Journal Title

      Annu.Rev.Plant Biol. 55

      Pages: 69-84

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cloning and Expression Analysis of a MAPKKK Gene and a Novel Nodulin Gene of Lotus Japonicus.2004

    • Author(s)
      N.Kinoshita, Y.Ooki, Y.Deguchi, S.A.Chechetka, H.Kouch, Y., Umehara, K.Izui, S.Hata.
    • Journal Title

      Biosci.Biotechnol.Biochem. 68

      Pages: 1805-1807

    • NAID

      10013521198

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 0verexpression of a Cyanobacterial Phosphoenolpyruvate Carboxylase with Diminished Sensitivity to Feedback Inhibition in Arabidopsis Changes Amino Acid Metabolism.2004

    • Author(s)
      L.-M.Chen, K.-Z.Li, T.Miwa, K.Izui.
    • Journal Title

      Planta 219

      Pages: 440-449

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Phosphoenolpyruvate carboxylase : An era of structural biology2004

    • Author(s)
      K.Izui, H.Matsumura, T.Furumoto, Y.Kai
    • Journal Title

      Annu.Rev.Plant Physiol.Mol.Biol. 55

      Pages: 69-84

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Characterization and expression analysis of genes encoding phos-phoenolpyruvate carboxylase and phosphoenolpyruvate carboxylase kinase of Lotus j aponicus,a model legume.2003

    • Author(s)
      Nakagawa T, lzumi T, Banba M, Umehara y, Kouchi H, lzui K, Hata S.
    • Journal Title

      Mol Plant Microbe Interact. 16

      Pages: 281-288

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Regulatory regions and nuclear factors involved in nodule-enhanced expression of a soybean phosphoenolpyruvate carboxylase gene : implications for molecular evolution2003

    • Author(s)
      Nakagawa T, Takane K, Sugimo toT, lzui K, Kouchi H, Hata S.
    • Journal Title

      Mol Genet Genomics 269

      Pages: 163-172

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 光合成のクロストーク2003

    • Author(s)
      泉井桂, 揚妻正和
    • Journal Title

      蛋白質・核酸・酵素 48

      Pages: 2090-2102

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 植物の炭酸固定酵素、ホスホエノールビルビン酸カルボキシラーゼ、を特異的にリン酸化するプロテインキナーゼとその調節2003

    • Author(s)
      泉井桂, 畑信吾, 古木強, 上野宜久
    • Journal Title

      日本農芸化学会誌 77

      Pages: 417-420

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization and Expression Analysis of Genes Encoding Phosphoenolpyruvate Carboxylase and Phosphoenolpyruvate Carboxylase Kinase of Lotus Japonicus, A Model Legume.2003

    • Author(s)
      T.Nakagawa, T.Izumi, M.Banba, Y.Umehara, H.Kouchi, K.Izui, S.Hata.
    • Journal Title

      Mol.Plant-Microbe Interact. 16

      Pages: 281-288

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Regulatory Regions and Nuclear Factors Involved in Nodule Enhanced Expression of a Soybean Phosphoenolpyruvate Carboxylase Gene : Implications for Molecular Evolution.2003

    • Author(s)
      T.Nakagawa, K.Takane, T.Sugimoto, K.Izui, H.Kouchi, S.Hata.
    • Journal Title

      Mol.Genet.Genomics 269

      Pages: 163-172

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Cross-talks in photosynthesis (Review)2003

    • Author(s)
      K.Izui, M.Agetsuma
    • Journal Title

      Tanpakushitsu Kakusan Koso. Nov;48(15 Suppl)

      Pages: 2090-2102

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] A Protein Kinase and Its Regulation, Which Specifically Phosphorylates Plant Phosphoenolpyruvate Carboxylasea, a CO_2-Fixation Enzyme.2003

    • Author(s)
      K.Izui, S.Hata, T.Furumoto, Y.Ueno
    • Journal Title

      Nippon Nougei Kagaku Kaishi 77

      Pages: 417-420

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Phosphoenolpyruvilte carboxylase : three-dimentional structure and molecular mechanisms2002

    • Author(s)
      Kai Y, Matsumura H, lzui K
    • Journal Title

      Arch. Biochem. Biophys. 414

      Pages: 170-179

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Crystal structures of C4 form maize and quaternary complex of E..coli phosphoenolpyruvate carboxylases2002

    • Author(s)
      Matsumura H, Xie Y, Shirakawa K, lnoue T, Yoshinaga T, Ueno Y, Izu K., Kai Y.
    • Journal Title

      Structure 10

      Pages: 1721-1730

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Thermostable and active phosphoenolpyruvate carboxylase from thermus sp. even after proteolytic cleavage2002

    • Author(s)
      Nakamura T, lzui K., Yumoto N.
    • Journal Title

      J. Mol. Catalysis B. Enzymatic 17

      Pages: 215-222

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular characterization of a phosphoenolpyruvate carboxylase from a thermophilic cyanobacterium,Synechococcus vulcanus wlth unusual allosteric properties2002

    • Author(s)
      Chen LM, 0miya T, Hata S, Izui K.
    • Journal Title

      Plant Cell Physiol. 43

      Pages: 159-169

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Phosphoenolpyruvate Carboxylase : Three-Dimensional Structure and Molecular Mechanisms. (Review)2002

    • Author(s)
      Y.Kai, H.Matsumura, K.Izui.
    • Journal Title

      Arch.Biochem.Biophys. 414

      Pages: 170-179

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Crystal Structures of C4 Form Maize and Quaternary Complex of E.coli Phosphoenolpyruvate Carboxylases.2002

    • Author(s)
      H.Matsumura, Y.Xie, K.Shirakawa, T.Inoue, T.Yoshinaga, Y.Ueno, K.Izui, Y.Kai.
    • Journal Title

      Structure 10

      Pages: 1721-1730

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Thermostable and Active Phosphoenolpyruvate Carboxylase from Thermus sp.Even after Proteolytic Cleavage.2002

    • Author(s)
      T.Nakamura, K.Izui, N.Yumoto.
    • Journal Title

      J.Mol.Catalysis B.Enzymatic 17

      Pages: 215-222

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular Characterization of a Phosphoenolpyruvate Carboxylase from a Thermophilic Cyanobacterium, Synechococcus vulcanus with Unusual Allosteric Properties.2002

    • Author(s)
      L.M.Chen, T.Omiya, S.Hata, K.Izui.
    • Journal Title

      Plant Cell Physiol. 43

      Pages: 159-169

    • NAID

      10008454255

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] 廣川タンパク質化学 酵素4-[4]第2分冊2004

    • Author(s)
      泉井 桂(編)
    • Total Pages
      163
    • Publisher
      広川書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] 廣川タンパク質化学 酵素4-[4]第1分冊2004

    • Author(s)
      泉井 桂(編)(分担執筆 3編)
    • Total Pages
      150
    • Publisher
      広川書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Protein Chemistry Vol.4 Enzymes 4.4 Lyase [II](In Japanese)2004

    • Author(s)
      K.Izui (editor)
    • Publisher
      Hirokawa Publishing Co.Tokyo
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] 泉井 桂: "植物の炭酸固定酵素ホスホエノールピルビン酸カルボキシラーゼを特異的にリン酸化するプロ点キナーゼとその調節"日本農芸化学会誌. 77. 417-420 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 泉井 桂: "光合成のクロストーク"タンパク質核酸酵素. 48. 2090-2102 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Izui: "Phosphoenolpyruvate Carboxylase : New era of structural biology"Annual review of Plant Biology. 55(In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] L.Chen: "Overexpression of a cyanobacterial phosphoenolpyruvate carboxylase with diminished sensitivity to feedback inhibition in Arabidopsis changes amino acid metabolism"Planta. (In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 泉井 編: "広川 タンパク質化学 第4巻 酵素 4.4リアーゼ[II]"広川書店(In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Y.Kai: "Phosphoenolpyruvate carboxylase : Three-dimensional structure and molecular mechanisms"Arch. Biochem. Biophys. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] H.Matsumura: "Crystal Structures of C4 Form maize and quaternary complex of E. coli phosphoenolpyruvate carboxylases"Striucture. 10・(12). 1721-1730 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Y.Tamada: "Effect of photo oxidative destruction of chloroplasts on the expression of nuclear genes for C4 photosynthesis"J. Plant Physiol.. 160・(1). 3-8 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 泉井: "植物の炭酸固定酵素,ホスホエノールピルビン酸カルホチシラーゼ,を特異的にリン酸化するプロテインキナーゼとその調節"日本農芸化学雑誌. (印刷中). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] 泉井編: "広川 タンパク質化学第4巻酵素4.4 リアーゼ〔I〕"広川書店(東京). 162 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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