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Ecological and molecular-epidemiological studies of Vibrio cholerae related bacteria in Indian Subcontinent

Research Project

Project/Area Number 14406006
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Bacteriology (including Mycology)
Research InstitutionOKAYAMA UNIVERSITY

Principal Investigator

SHINODA Sumio  OKAYAMA UNIVERSITY, Graduate School of Natural Science and Technology, Professor, 大学院・自然科学研究科, 教授 (50029782)

Co-Investigator(Kenkyū-buntansha) OKAMOTO Keinosuke  OKAYAMA UNIVERSITY, Faculty of Pharmaceutical Sciences, Professor, 薬学部, 教授 (70131183)
TOMOCHIKA Ken-ichi  Okayama Gakuin University, Faculty of Human Life, Professor, 人間生活学部, 教授 (00093691)
MIYOSHI Shin-ichi  OKAYAMA UNIVERSITY, Graduate School of Natural Science and Technology, Associate Professor, 大学院・自然科学研究科, 助教授 (60182060)
Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥14,600,000 (Direct Cost: ¥14,600,000)
Fiscal Year 2004: ¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2003: ¥4,700,000 (Direct Cost: ¥4,700,000)
Fiscal Year 2002: ¥6,900,000 (Direct Cost: ¥6,900,000)
KeywordsCholera / Vibrios / Diarrheal disease / Indian-subcon / Ecology / Molecular epidemiology
Research Abstract

Vibrio cholerae colonizes aquatic environments in Indian-subcontinent, especially in Ganges Basin, and causes cholera epidemics periodically. Of the 206 serovars of V.cholerae, only O1 and 139 cause epidemic cholera, whereas non-O1/non-O139 strains do not, although sporadic diarrheal cases are observed. To clarify epidemic feature of cholera in these area, V.cholerae strains were isolated from from environmental and clinical origins and analysed.
V.cholerae isolates from both origins in the Bengal region were analyzed with particular emphasis on the molecular epidemiological feature. Presence of the virulence genes (ctxA,tcpA and toxR) in the isolates was analyzed by PCR(polymerase chain reaction) method. PFGE (pulsed-field gel electrophoresis) was performed to determine the clonal relationships between clinical and environmental strains. O1 and O139 strains from both clinical and environmental sources were all positive for the three virulence genes while nonO1/non-O139 strains from both sources were all negative for ctxA and tcpA, except a strain, but positive for toxR. PFGE patterns of recent isolates of O1 and O139 were similar in each serovar regardless of origins, although comparison with past isolates showed some differences. An exceptional non-O1/non-O139 strain. was positive for ctxA and tcpA of classical type. These results indicate that there is a clonal relationship between clinical and environmental strains and the aquatic environments serve as reservoirs of toxigenic V.cholerae.

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (13 results)

All 2005 2004 2003 Other

All Journal Article (10 results) Publications (3 results)

  • [Journal Article] A variant type of Vibrio cholerae SXT element in a multidrug-resistant strain of Vibrio fluvialis.2005

    • Author(s)
      Ahmed, A.M., Shinoda, S., Shimamoto, T.
    • Journal Title

      FEMS Microbiology Letter 242

      Pages: 241-247

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] A variant type of Vibrio cholerae SXT element in a mutidrug-resistant str5ain of VIbrio fluvialis.2005

    • Author(s)
      Ahmed, A.M., Shinoda, S., Shimamoto, T.
    • Journal Title

      FEMS Microbiol.Lett. 242

      Pages: 241-247

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] A variant type of Vibrio cholerae SXT element in a mutidrug-resistant strain of VIbrio fluvialis.2005

    • Author(s)
      Ahmed, A.M., Shinoda, S., Shimamoto, T.
    • Journal Title

      FEMS Microbiol.Lett. 242

      Pages: 241-247

    • Related Report
      2004 Annual Research Report
  • [Journal Article] New aminoglycoside acetyltransferase gene, aac(3)-ID, in a class 1 integron from a multiresistant strain of Vibrio fluvialis isolated from an infant aged 6 months2004

    • Author(s)
      Ahmed, A.M., Nakagawa, T., Arakawa, E., Ramamurthy, T., Shinoda, S., Shimamoto, T.
    • Journal Title

      Journal of Antimicrobial Chemotherapy 53

      Pages: 947-951

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Distribution of virulence-associated genes in Vibrio mimicus isolates from clinical and environmental origins.2004

    • Author(s)
      Shinoda, S., Nakagawa, T., Shi, L., Bi, K., Kanoh, Y., Tomochika, K., Miyoshi, S., Shimada, T.
    • Journal Title

      Microbiology and Immunology 48

      Pages: 547-551

    • NAID

      10013297602

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] New aminoglycoside acetyltransferase gene, aac(3)-ID, in a class 1 integron from a multiresistant st5rain of Vibrio fluvialis isolated from an infant aged 6 months.2004

    • Author(s)
      Ahmed, A.M., Nakagawa, T., Arakawa, E., Ramamurthy, T., Shinoda, S., Shimamoto, T.
    • Journal Title

      J.Antimicrobial Chemother 53

      Pages: 947-951

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Distribution of virulence-associated genes in Vibrio mimicus isolates from clinical and environmental origins.2004

    • Author(s)
      Shinoda, S., Nakagawa, T., Shi, L., Bi, K., Kanoh, Y., Tomochika, K., Miyoshi, S., Shimada, T.
    • Journal Title

      Microbiol.Immunol. 48

      Pages: 547-551

    • NAID

      10013297602

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Distribution of virulence-associated genes in Vibrio mimicus isolates from clinical and environmental origins.2004

    • Author(s)
      Shinoda, S., Nakagawa, T., Shi, L., Bi, K., Kanoh, Y., Tomochika, K., Miyoshi, S., Shimada, T.
    • Journal Title

      Microbiol.Immunol 48

      Pages: 547-551

    • NAID

      10013297602

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Studies on pathogenic Vibrio parahaemolyticus during a warm weather season in the Seto-inland sea, Japan.2003

    • Author(s)
      Alam, Md.J., Miyoshi, S., Shinoda, S.
    • Journal Title

      Environmental Microbiology 5

      Pages: 706-710

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Studies on pathogenic Vibrio parahaemolyticus during a warm weather season in the Seto-inland sea, Japan.2003

    • Author(s)
      Alam, Md.J., Miyoshi, S., Shinoda, S.
    • Journal Title

      Env.Microbiol. 5

      Pages: 706-710

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Watanabe, H., Miyoshi, S., Kawase, T., Tomochika, K., Shinoda, S.: "High growing ability of Vibrio vulnificus biotype 1 is essential for production of a toxic metalloprotease causing systemic diseases in humans."Microbiol.Pathog.. 36. 117-123 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ahmed, A.M., Nakagawa, T., Arakawa, E., Ramamurthy, T., Shinoda, S., Shimamoto, S.: "New Aminoglycoside Acetyltransferase Gene, aac(3)-Id, and aadA7 in Class I Integron from a Multiresistant Strain of Vibrio fluvialis Isolated from a Six-Month Infant with a Cholera-like Diarrhea in India"Journal of Antimicrobial Chemotherapy. (In press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Bi, K., Miyoshi, S., Tomochika, K., Shinoda, S.: "Detection of virulence associated genes in clinical strains of Vibrio mimicus"Microbiology and Immunology. 45. 613-616 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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