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DNA base recognition and reaction with polynuclear metal complexes

Research Project

Project/Area Number 14540541
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 機能・物性・材料
Research InstitutionCHUO UNIVERSITY

Principal Investigator

CHIKIRA Makoto  Chuo University, Faculty of Science and Engineering, Professor, 理工学部, 教授 (70006328)

Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,200,000 (Direct Cost: ¥3,200,000)
Fiscal Year 2003: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 2002: ¥1,700,000 (Direct Cost: ¥1,700,000)
Keywordspolynuclear metal complex / DNA / oxidative cleaving / hydrolysis / DNA-fiber ESR / peptide copper complex / Schiff-base complex / phenanthroline zinc complex / 二核錯体 / 銅(II)錯体 / テトラペプチド / DNA切断反応 / 国際情報交換 / アメリカ / ヒスチジン / SOD活性
Research Abstract

To develop reagents for oxidative or hydrolytic cleavage of DNA, we have synthesized polynuclear metal complexes listed below and investigated their binding structure, the affinity to DNA, and the DNA cleaving reaction by using various spectroscopic measurements, X-ray crystallography, mass analysis, and agarose gel electrophoresis. Comparing the results with those of the corresponding mononuclear metal complexes, we have tried to analyze the factors that govern the specific orientation of the metal complexes and the reactivity.
(1)Histidine-containing peptide dinuclear copper(II) complexes.
(2)Hetero dinuclear copper(II) complexes with different coordination sites.
(3)Water-soluble salicylaldehyde Schiff base dinuclear Ni(II) complexes.
(4)Dinuclear copper(II) complex containing cis,cis-1,3,5-triaminocyclohexane (tach).
(5)Trinuclear zinc(II) complex of a 2,9-substituted phenanthroline derivative.
In the case of (1), it was shown that amino acid sequences of the peptides influence considerably the binding structure and cleavage. The crystal structure of the complex synthesized in (2) was determined and the presence of two different coordination sites was confirmed. The structure of the complex bound to DNA was investigated by DNA fiber ESR spectroscopy. Dinuclear Ni(II) Schiff base complexes (3) with tetraaminodiphenyl group (complex 1) and with aminoalcohol and pyrazole groups (complex 2) were synthesized and characterized. The oxidative DNA cleavage activity increased for complex 1 but decreased for complex 2, compared with those of the corresponding mononuclear complexes. In the case of (4), μ-η2:η2 peroxide complex was detected in the reaction of the complex with hydrogen peroxide, indicating that the hydroperoxo form was the active species for DNA cleaving reaction. Finally, a novel trinuclear Zn(II) complex (5) showed hydrolytic DNA cleaving reactivity much stronger than the corresponding mononuclear Zn(II) complex.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (11 results)

All 2005 2004 Other

All Journal Article (6 results) Publications (5 results)

  • [Journal Article] Copper(II) Complexes of 1,10-Phenanthroline-derived Ligands : Studies on DNA Binding Properties and Nuclease Activity2005

    • Author(s)
      Tomoya Hirohama
    • Journal Title

      J.Inorg.Biohem. (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Copper(II) Complexes of 1,10-Phenanthroline-derived Ligands : Studies on DNA Binding Properties and Nuclease Activity2005

    • Author(s)
      Tomoya Hirohama, et al.
    • Journal Title

      J.Inorg.Biochem. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Effect of a conjugated acridine moiety on the binding and reactivity of Cu(II)[9-acridinylmethyl-1,4,7-triazacyclononane] with DNA2004

    • Author(s)
      Tomoya Hirohama
    • Journal Title

      J.Inorg. Biohem. 98

      Pages: 1778-1786

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] EPR study of the dynamic behavior of cis,cis-1,3,5-triaminocyclohexane Cu(II) complex on B-form DNA-fibers2004

    • Author(s)
      Tomoya Hirohama
    • Journal Title

      J.Inorg.Biohem. 98

      Pages: 371-376

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] EPR study of the dynamic behavior of cis,cis-1,3,5-triaminocyclohexane Cu(II) complex on B-form DNA-fibers2004

    • Author(s)
      Tomoya Hirohama, Akiko Chiba, Makoto Chikira
    • Journal Title

      J.Inorg.Biochem. vol.98

      Pages: 371-376

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Journal Article] Effect of a conjugated acridine moiety on the binding and reactivity of Cu(II)[9-acridinylmethyl-1,4,7-triazacyclononane] with DNA2004

    • Author(s)
      Tomoya Hirohama, Hidekazu Arii, Makoto Chikira
    • Journal Title

      J.Inorg.Biochem. vol.98

      Pages: 1778-1786

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] T.Hirohama, A.Chiha, M.Chikira: "EPR study of the dynamic behavior of cis, cis-1,3,5-triaminocyclohexane Cu(II) complex on B-form DNA-fibers"J.Inorg.Biochem.. 98・2. 371-376 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Hirohama, M.Chikira: "The effect of acridine moiety for binding and reaction of Cu(II)[1,4,7-triazacyclononane] with DNA"Nucleic Acids Research, Supplement. 3. 91-92 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] M.Yamanaka, M.Chikira: "Interaction of Ni(III) complexes of peptides with DNA ; Analysis by DNA-fiber EPR"Nucleic Acids Research Supplement. 2. 195-196 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] R.Nagane, T.Koshigoe, M.Chikira: "Interaction of Cu(II)-Arg-Gly-His-Xaa metallopeptides with DNA : effect of C-terminal residues, Leu and Glu"J.Inorg.Biochem. 93・3-4. 204-212 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] T.liyama, M.Chikira, T.Oyoshi, H.Sugiyama: "Deglyco-peplomycin metal complexes on DNA fibers : a role of the sugar moiety for the stability and the orientation of the complexes"J.Biol.Inorg.Chem.. 8・1-2. 135-140 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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