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Study on Coupled Brownian Motors

Research Project

Project/Area Number 14550058
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Engineering fundamentals
Research InstitutionKYOTO UNIVERSITY

Principal Investigator

IGARASHI Akito  KYOTO UNIVERSITY, Graduate School of Informatics, Associate Professor, 情報学研究科, 助教授 (00115784)

Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2003: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2002: ¥2,200,000 (Direct Cost: ¥2,200,000)
Keywordsstochastic process / Brownian motor / molecular motor / coupled system / ratchet model / noise / segregation
Research Abstract

We study coupled Brownian-motor models (ratchet models) in this study. (1)First, one-dimensional models. which are models for acto-myosin molecular motors for muscle contraction, are investigated with computer simulation. In the model, Brownian motors are placed in one-dimension and coupled to the two nearest neighbor motors with a linear spring. We obtain the velocity of the string consisting of motors, and find that the velocity of the coupled system is faster than that of the uncoupled system. Moreover, the energy efficiency, that is, the ratio of the work done by the system to the energy injected externally, is calculated. The efficiency for the coupled system is also higher than that of the uncoupled system. (2)Secondly, we extend the above model to allow motion in two dimensional space in order to reproduce the results of experiments in the so-called motility assay, where actin filaments are placed on a slide glass which is covered with myosin molecules and the filaments move to a certain direction for an appropriate environmental condition if ATP is added to the system. From our computer simulation, we observe that the longer the actin filament of our model becomes, the more clearly the filament moves to a certain direction and that the velocity of the filament becomes fast with the increase of the equilibrium distance between two nearest-neighbor motors. (3)Finally, we try to segregate the mixture of particles with the oscillating ratchet mechanism. That is, we pour the mixture on a container with a asymmetric saw-tooth base oscillating vertically and each kind of particles moves to the mutually opposite direction with an appropriate condition. If we place two boxes at the right and left sides of the container and collect particles with them, the segregation of the mixture becomes possible. We ascertain the possibility from computer simulation with the aid of the event driven algorism.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (5 results)

All Other

All Publications (5 results)

  • [Publications] Akito Igarashi: "One- and two-dimensional dynamics of elastically coupled Brownian motors"Phyysica A. 325・1-2. 62-68 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Akito Igarashi: "Granular Segregation by an Oscillating Ratchet Mechanism"Acta Physica Polonica B. 35・4. 1471-1480 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Akito Igarashi, Hiromichi Goko, Shinji Tsukamoto: "One-and two-dimensional dynamics of elastically coupled Brownian motors"Physica A. Vol.325 No.1-2. 62-68 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Akito Igarashi, Chuichi Horiuchi: "Granular segregation by an oscillating ratchet mechanism"Acta Physica Plonica B. Vol.35 No.4. 1471-1480 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Akito Igarashi: "One- and two-dimentional dynamics of elastically coupled Brownian motors"Physica A. 325・1-2. 62-68 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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