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Study on the variety of synthesizing enzyme for isoprenoid side chain in ubiquinone

Research Project

Project/Area Number 14560067
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 応用微生物学・応用生物化学
Research InstitutionShimane University

Principal Investigator

KAWAMUKAI Makoto  SHIMANE UNIVERSITY, LIFE AND ENVIRONMENTAL SCIENCE, PROFESSOR, 生物資源科学部, 教授 (70186138)

Co-Investigator(Kenkyū-buntansha) MATSUDA Hideyuki  SHIMANE UNIVERSITY, LIFE AND ENVIRONMENTAL SCIENCE, PROFESSOR, 生物資源科学部, 教授 (50032595)
Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2003: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2002: ¥2,300,000 (Direct Cost: ¥2,300,000)
KeywordsUBIQUINONE / COQ / ANTIOXIDANT / FISSION YEAST / RESPIRATION / PRENYL TRANSFERASE / 生合成
Research Abstract

Long-chain producing polyprenyl diphosphate synthase, which is responsible for the side chain of ubiquinone, has been mostly analyzed from prokaryotic origins, and little is known about the nature of eukaryotic enzyme. Here, we show decaprenyl diphosphate synthase from Schizosaccharomyces pombe forms a heterotetramer unlike prokaryotic types of enzymes. We found the novel protein named D1pl is the partner of Dps1, and formed a heterotetrameric complex to constitute an active decaprenyl diphosphate synthase in S. pombe. While Dps1 is the highly homologous protein with other prenyl diphosphate synthases, Dlp1 only retains weak homology with Dps1. The deletion mutant of dlp1 lost the enzymatic activity of decaprenyl diphosphate synthase, did not produce UQ-10 and resulted in a typical ubiquinone less phenotype in S. pombe, i.e., hypersensitivity to H_2O_2, requirement of antioxidant to grow on the minimal medium, and an elevated production of H_2S. Both dps1 and dlp1 mutants can be restored by expressing bacterial driven decaprenyl diphosphate synthase which is solely functional, indicating both dps1 and dlp1 is required for the enzymatic activity. Furthermore, we show Dps1 and Dlp1 formed a heterotetrameric complex and reconstituted in an active enzyme in Escherichia coli. Thus, decaprenyl diphosphate from an eukaryotic origin constitutes a heterotetrameric type of enzyme structure which was not found in prokaryotes.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (13 results)

All Other

All Publications (13 results)

  • [Publications] R.Saiki, A.Nagata, N.Uchida, T.Kainou, H.Matsuda, M.Kawamukai: "Fission yeast decaprenyl diphosphate synthase consists of Dps1 and the newly caracterized Dlp1 protein in a novel heterotetrameric structure"European Journal of Biochemistry. 270. 4113-4121 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Saiki, Y.Ogiyama, T.Kainou, T.Nishi, H.Matsuda, M.Kawamukai: "Pleiotropic phenotypes of fission yeast defective in ubiquinone-10 production. A study from the abc1Sp (coq8Sp) mutant"Biofactors. 18. 229-235 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makoto Kawamukai: "Biosynthesis, bioproduction and novel roles of ubiquinone"J.Biosci.Bioeng.. 94. 511-517 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 川向 誠: "ユビキノンの生合成と新しい生理的機能"化学と生物. 40. 172-178 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 大矢禎一編, 川向 誠他訳: "酵母遺伝子実験マニュアル"丸善. 240 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Makoto Kawamukai: "Biosynthesis, bioproduction and novel roles of ubiquinone"J.Biosci.. 94. 511-517 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ryoichi Saiki, Ai Nagata, Naonori Uchida, Tomohiro Kainou, Hideyuki Matsuda, Makoto Kawamukai: "Fission yeast decaprenyl diphosphate synthase consists of Dps1 and the newly characterized Dlp1 protein in a novel heterotetrameric structure."Eur.J.Biochem.. 270. 4113-4121 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ryoichi Saiki, Yuki Ogiyama, Tomohiro Kainou, Tomoko Nishi, Hideyuki Matsuda, Makoto Kawamukai: "Pleiotropic phenotypes of fission yeast defective in ubiquinone-10 production. A study from the abc1Sp (coq8Sp) mutant."Biofactors. 18. 229-235 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] R.Saiki, A.Nagata, N.Uchida, T.Kainou, H.Matsuda, M.Kawamukai: "Fission yeast decaprenyl diphosphate synthase consists of Dps1 and the newly characterized Dlp1 protein in a novel heterotetrameric structure"European Journal of Biochemistry. 270. 4113-4121 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] R.Saiki, Y.Ogiyama, T.Kainou, T.Nishi, H.Matsuda, M.Kawamukai: "Pleiotropic phenotypes of fission yeast defective in ubiquinone-10 production. A study from the abc1Sp (coq8Sp) mutant"Biofactors. 18. 229-235 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Makoto Kawamukai: "Biosynthesis, bioproduction and novel roles of ubiquinone"J. Biosci. Bioeng.. 94. 511-517 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 川向 誠: "ユビキノンの生合成と新しい生理的機能"化学と生物. 40. 172-178 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 川向 誠他: "酵母遺伝子実験マニュアル"丸善. 240 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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