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Basic and developmental study an diversity and function of orosomucoid gene

Research Project

Project/Area Number 14570387
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Legal medicine
Research InstitutionNational University Corporation Tottori University

Principal Investigator

IRIZAWA Yoshito  National University Corporation Tottori University, Faculty of Medicine, Professor, 医学部, 教授 (90112226)

Co-Investigator(Kenkyū-buntansha) YUASA Isao  National University Corporation Tottori University, Faculty of Medicine, Associate Professor, 医学部, 助教授 (00093633)
NAKAGAWA Mayumi  National University Corporation Tottori University, Faculty of Medicine, Associate Research, 医学部, 助手 (00243410)
UMETSU Kazuo  National University Corporation Yamagata University, Faculty of Medicine, Associate Professor, 医学部, 助教授 (10091828)
Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2004: ¥800,000 (Direct Cost: ¥800,000)
Fiscal Year 2003: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2002: ¥1,800,000 (Direct Cost: ¥1,800,000)
Keywordsorosomucoid / alpha-1-acid glycoprotein / gene diversity / gene duplication / function analysis / α1-酸性糖タンパク / α_1-酸性糖タンパク
Research Abstract

In this study, we have clarified the genomic structure of the ORM gene in African and European populations. They showed duplication of the ORM1^*F1 gene, i.e., ORM1^*F1-ORM1^*F1-ORM2^*M structure. This major triplicated gene was evidently different from the genomic structure observed in Japanese populations, which have ORM1^*F1-ORM1^*S1-ORM2^*M structure. In Africans ORM1A^*S1(1)-ORM1B^*S2(T)-ORM2^*M was also observed, while in Europeans ORM1^*F2-ORM1^*S1-ORM2^*M structure was also found. Although independent recombination events have occurred in Africans and Japanese, recombination breakpoints lay within a small genomic interval around exon 1 of the ORM1B gene in both populations. A duplication of the ORM2 gene was rather rare. The highest nucleotide diversity of the ORM2 gene was found in Africans.
Subsequently, we have cloned a cDNA of an ORM1 gene and introduced mutations in the cloned cDNA by site-directed mutagenesis. And then the mutated genes were ligated into commercial available pcDNA3.1 expression vector. After subcloning in E.coli and transfecting into Cos-7 cell, we have obtained mutated proteins. Thus, we established the method for the preparation of mutated ORM1 proteins. This method and these proteins would be useful for studying the role of the ORM protein in transportation of basic drugs.

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (28 results)

All 2004 2003 2002 Other

All Journal Article (18 results) Publications (10 results)

  • [Journal Article] Molecular basis of ESD^*5 and ESD^*7 and haplotype analysis with new polymorphisms in introns.2004

    • Author(s)
      I.Yuasa, K.Umetsu, S.Tsuchida, Y.Irizawa, et al.
    • Journal Title

      Human Biology 76

      Pages: 479-488

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] MATP polymorphisms in Germans and Japanese : the L374F mutation as a population marker for Caucasoids.2004

    • Author(s)
      I.Yuasa, K.Umetsu, G.Watanabe, H.Nakamura, M.Endoh, Y.Irizawa
    • Journal Title

      International Journal of Legal Medicine 118

      Pages: 364-366

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular basis of analysis of ESD^*5 and ESD^*7 and haplotype analysis with new polymorphisms in introns.2004

    • Author(s)
      I.Yuasa, K.Umetsu, S.Tsuchida, Y.Irizawa, L.Henke, J.Henke
    • Journal Title

      Human Biology 76(3)

      Pages: 479-488

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] MATP polymorphisms in Germans and Japanese : the L374F mutation as a population marker for Caucasoids.2004

    • Author(s)
      I.Yuasa, K.Umetsu, G.Watanabe, H.Nakamura, M.Endoh, Y.Irizawa
    • Journal Title

      International Journal of Legal Medicine 118(6)

      Pages: 364-366

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular basis of ESD^*5 and ESD^*7 and haplotype analysis with new polymorphisms in introns.2004

    • Author(s)
      I.Yuasa, K.Umetsu, S.Tsuchida, et al.
    • Journal Title

      Human Biology 76巻3号

      Pages: 479-488

    • Related Report
      2004 Annual Research Report
  • [Journal Article] MATP polymorphisms in Germans and Japanese : the L374F mutation as a population marker for Caucasoids.2004

    • Author(s)
      I.Yuasa, K.Umetsu, G.Watanabe, et al.
    • Journal Title

      International Journal of Legal Medicine 118巻6号

      Pages: 364-366

    • Related Report
      2004 Annual Research Report
  • [Journal Article] オロソムコイド遣伝子の分子進化:アフリカ人における変異2003

    • Author(s)
      湯浅 勲, 中川真由美, 入澤淑人, 中村博明, 梅津和夫
    • Journal Title

      DNA多型 11

      Pages: 95-98

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The human complement component Clr gene : the exon-intron structure and the molecular basis of allelic diversity.2003

    • Author(s)
      M.Nakagawa, I.Yuasa, Y.Irizawa, K.Umetsu
    • Journal Title

      Annals of Human Genetics 67

      Pages: 207-215

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The molecular evolution of orosomucoid gene : variation in Africans Ghanaian mother and her child (in Japanese).2003

    • Author(s)
      I.Yuasa, M.Nakagawa, Y.Irizawa, H.Nakamura, K.Umetsu
    • Journal Title

      DNA Polymorphism 11

      Pages: 95-98

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The human complement component C1r gene : the exon-intron structure and the molecular basis of allelic diversity.2003

    • Author(s)
      M.Nakagawa, I.Yuasa, Y.Irizawa, K.Umetsu
    • Journal Title

      Annals of Human Genetics 67(3)

      Pages: 207-215

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] オロソムコイド遺伝子の分子進化:アフリカ人における変異2003

    • Author(s)
      湯浅 勲, 中川真由美, 入澤淑人, 中村博明, 梅津和夫
    • Journal Title

      DNA多型 11巻

      Pages: 95-98

    • NAID

      10013995487

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The human complement component C1r gene : the exon-intron structure and the molecular basis of allelic diversity.2003

    • Author(s)
      M.Nakagawa, I.Yuasa, Y.Irizawa, K.Umetsu
    • Journal Title

      Annals of Human Genetics 67巻3号

      Pages: 207-215

    • Related Report
      2004 Annual Research Report
  • [Journal Article] オロソムコイド遺伝子の分子進化:ガーナ人母子における遺伝子再構成2002

    • Author(s)
      湯浅 勲, 中川真由美, 入澤淑人, 中村博明, 梅津和夫
    • Journal Title

      DNA多型 10

      Pages: 183-185

    • NAID

      10013994989

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular analysis of the human esterase D gene ESD^*QO_<yonago> responsible for incompatibility in a Japanese paternity case.2002

    • Author(s)
      I.Yuasa, K.Umetsu, S.Tsuchida, et al.
    • Journal Title

      Forensic Science International 126

      Pages: 248-251

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The molecular evolution of orosomucoid gene : the rearrangement in Ghanaian mother and her child (in Japanese).2002

    • Author(s)
      I.Yuasa, M.Nakagawa, Y.Irizawa, H.Nakamura, K.Umetsu
    • Journal Title

      DNA Polymorphism 10

      Pages: 183-185

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular analysis of the human esterase D gene ESD^*Q0_<yonago> responsible for incompatibility in a Japanese paternity case.2002

    • Author(s)
      I.Yuasa, K.Umetsu, S.Tsuchida, H.Nakamura, M.Endoh, M.Nakagawa, Y.Irizawa
    • Journal Title

      Forensic Science International 126(3)

      Pages: 248-251

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] オロソムコイド遺伝子の分子進化:ガーナ人母子における遺伝子再構成2002

    • Author(s)
      湯浅 勲, 中川真由美, 入澤淑人, 中村博明, 梅津和夫
    • Journal Title

      DNA多型 10巻

      Pages: 183-185

    • NAID

      10013994989

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Molecular analysis of the human esterase D gene ESD^*Q0_<yonago> Responsible for incompatibility in a Japanese paternity case.2002

    • Author(s)
      I.Yuasa, K.Umetsu, S.Tsuchida, et al.
    • Journal Title

      Forensic Science International 126巻3号

      Pages: 248-251

    • Related Report
      2004 Annual Research Report
  • [Publications] Nakagawa M, Yuasa I, Irizawa Y, Umetsu K: "The human complement component C1r gene : the exon-intron structure and the molecular basis of allelic diversity."Annals of Human Genetics. 67(3). 207-215 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ono H, Sakura N, Yamashita K, Yuasa I, Ohno K: "Novel nonsense mutation (R194X) in the PMM2 gene in a Japanese patient with congenital disorder of glycosylation type Ia."Brain and Development. 27(7). 525-528 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Naito E, Dewa K, Fukuda M, Sumi H, Wakabayashi Y, Umetsu K, Yuasa I: "Novel paternity testing by distinguishing parental alleles at a VNTR locus in the differentially methylated region upstream of the human H19 gene."Journal of Forensic Sciences. 48(6). 1275-1279 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yuasa I, Umetsu K, Tsuchida S, Irizawa Y, Henke L, Henke J: "The human esterase D gene : molecular basis of ESD*5 and ESD*7 and haplotype analysis with new polymorphisms in introns."Human Biology. 76(in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 湯浅 勲, 中川真由美, 入澤淑人, 中村博明, 梅津和夫: "オロソムコイド遺伝子の分子進化:アフリカ人における変異"DNA多型. 11. 95-98 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Oota, H: "Extreme mtDNA homogeneity in continental Asian populations"American Journal of Physical Anthoropology. 118(2). 146-153 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Yuasa, I.: "Molecular analysis of the human esterase D gene ESD*Q0 yonago responsible for incompatibility in a Japanese paternity case"Forensic Science International. 126(3). 248-251 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Umetsu, K: "Complete mitochondrial DNA sequence of a tadpole shrimp (Triops can crifomis) and analysis of museum samples"Electrophoresis. 23(24). 4080-4084 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 湯浅 勲: "オロソムコイド遺伝子の分子進化:ガーナ人母子における遺伝子再構成"DNA多型. 10. 183-185 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] 内藤笑美子: "アリルの父母由来を識別する方法-ゲノムインプリント機構の利用-"DNA多型. 10. 198-200 (2002)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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