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Identification and cell biological analysis of the gene for benign adult familial myoclonic epilepsy

Research Project

Project/Area Number 14570954
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Psychiatric science
Research InstitutionUniversity of Kyoto (2003)
The Institute of Physical and Chemical Research (2002)

Principal Investigator

EBIHARA Mitsuru  University of Kyoto, Laboratory for genetic engineering and functional genomics, Researcher, 医学研究科, 研究員(科学技術振興)(常勤形態) (80232974)

Co-Investigator(Kenkyū-buntansha) YOSHIKAWA Takeo  University of Kyoto, Laboratory for molecular psychiatry, Team Leader, 分子精神科学研究チーム, チームリーダー(研究職) (30249958)
Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2003: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2002: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsEpilepsy / BAFME / Potassium channel / Channelopathy / Whole genome scan / Linkage analysis / Luciferase assay / channellopathy / Channellopathy / Founder effect
Research Abstract

Benign adult familial myoclonic epilepsy (BAFME) is an autosomal dominant idiopathic epilepsy characterized by adult-onset, high penetration rate, myoclonus, tremulous finger movement and infrequent epileptic seizure. BAFME was recognized only in Japan.
Linkage analysis was carried out in a Japanese family using ABI Linkage Map Set. Chromosome 2, 7, 8, 10 and 17 were not excluded by linkage analysis, but it was strongly suggested that BAFME susceptibility locus is within 4.4cM on the human chromosome 8q23-24 by using extra markers. We have isolated more than 40 BAC clones covering one third of BAFME susceptibility region. We also had YAC contig spanning this region. By using these BAC and YAC clones, exon trapping was performed, resulted in the isolation of two novel exonic sequences. The isolation of the longest cDNAs clone from cDNA library revealed that they have neither homology with the other gene, nor ORF in their sequences. We also found three different potassium channel genes (KCNQ3, Kv8.1 and Kv9.2) on 8q23-24. Because epilepsies are thought to be channelopathy, these are candidate genes for BAFME. Mutation search was performed on these three potassium channel genes in a Japanese family. We couldn't find any mutation both in the KCNQ3 and Kv8.1 gene, but we found an extra 5' exon and possible alternative 3' end in the Kv8.1 gene. No mutation was found in the Kv9.2 gene either. Analysis of promoter activity was performed by using luciferase assay to determine possible promoter region of these potassium channel genes, resulted in the finding of new essential elements in these promoters. The possibility of founder effect in Japanese families is also excluded by genotyping of the other families with BAFME.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Mitsuru Ebihara, Hisako Ohba, Mika Kikuchi, Takeo Yoshikawa: "Structural characterization and promoter analysis of human potassium channel Kv8.1 (KCNV1) gene."Gene. 21. 89-96 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 海老原充, 大羽尚子, Joanne Meerabux, 大久保善朗, 加藤昌明, 豊田倫子, 数藤由美子, 山田和男, 吉川武男: "良性成人型家族性ミオクローヌスてんかん原因遺伝子の探索"てんかん治療研究振興財団研究年報. 15巻. 57-64 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Itokawa, Masanari, Yamada, Kazuo, Yoshitsugu, Kiyoshi, Toyota, Tomoko, Suga, Toshiro, Ohba, Hisako, Watanabe, Akiko, Hattori, Eiji, Shimizu, Hiromitsu, Kumakura, Tetsuo, Ebihara, Mitsuru, Meerabux, Joanne MA, Toru, Michio, Yoshikawa, Takeo: "A microsatellite repeat in the promoter of the N-methyl-d-aspartate receptor 2A subunit (GRIN2A) gene suppresses transcriptional activity and correlates with chronic outcome in schizophrenia"Pharmacogenetics. 13. 271-278 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ebihara, M., Ohba, H., Hattori, E., Yamada, K., Takeo Yoshikawa, T.: "Transcriptional activities of cholecystokinin promoter haplotypes and their relevance to panic disorder susceptibility"American Journal of Medical Genetics Neuropsychiatric Genetics. 118(B)2. 32-35 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ebihara, M., Ohba, H., Ohno, S., Yoshikawa, T.: "Genomic organization and promoter analysis of the human nicotinic acetylcholine receptor a6 subunit (CHNRA6) gene : Alu and other elements direct transcriptional"Gene. 298. 101-108 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hattori E., Yamada K., Ebihara M., Toyota T., Nankai M., Shibuya H., Yoshikawa T.: "Association study of the short tandem repeat in the 5' upstream region of the cholecystokinin gene with mood disorders in the Japanese population."American Journal of Medical Genetics. 114. 523-526 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mitsuru Ebihara, Hisako Ohba, Mika Kikuchi, Takeo Yoshikawa: "Structural characterization and promoter analysis of human potassium channel Kv8.1 (KCNV1) gene"Gene.. 21,2004:325. 89-96 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mitsuru Ebihara, Hisako Ohba, Joanne Meerabux, Yosirou Ohkubo, Masaaki Kato, Tomoko Toyota, Yumiko Sudo, Kazuo Yamada, Takeo Yoshikawa: "Search for a benign adult familial myoclonic epilepsy gene"Annual Report of the Japan Epilepsy Research Foundation. 15. 57-64 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Itokawa, Masanari, Yamada, Kazuo.Yoshitsugu, Kiyoshi.Toyota, Tomoko.Suga, Toshiro Ohba, Hisako.Watanabe, Akiko.Hattori, Eiji.Shimizu, Hiromitsu.Kumakura, Tetsuo.Ebihara, Mitsuru.Meerabux, Joanne MA.Torn, Michio.Yoshikawa, Takeo.: "A microsatellite repeat in the promoter of the N-methyl-d-aspartate receptor 2A subunit (GRIN2A) gene suppresses transcriptional activity and correlates with chronic outcome in schizophrenia."Pharmacogenetics. 13(5). 271-278 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ebihara, M., Ohba, H., Hattori, E., Yamada, K., Takeo Yoshikawa, T.: "Transcriptional activities of cholecystokinin promoter haplotypes and their relevance to panic disorder susceptibility."Am.J.Med.Genet. Neuropsychiatric Genet. 118B(1). 32-35 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ebihara, M., Ohba, H., Ohno, S., Yoshikawa, T.: "Genomic organization and promoter analysis of the human nicotinic acetylcholine receptor a6 subunit (CHNRA6) gene: Alu and other elements direct transcriptional repression."Gene. 298. 101-108 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hattori E.Yamada K.Ebihara M.Toyota T.Nankai M.Shibuya H.Yoshikawa T.: "Association study of the short tandem repeat in the 5' upstream region of the cholecystokinin gene with mood disorders in the Japanese population."American Journal of Medical Genetics. 114(5). 523-526 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Mitsuru Ebihara, Hisako Ohba, Mika Kikuchi, Takeo Yoshikawa: "Structural characterization and promoter analysis of human potassium channel Kv8.1 (KCNV1) gene"Gene. Vol.21. 89-96 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 海老原充, 大羽尚子, Joanne Meerabux, 大久保善朗, 加藤昌明, 豊田倫子, 数藤由美子, 山田和男, 吉川武男: "良性成人型家族性ミオクローヌスてんかん原因遺伝子の探索"てんかん治療研究振興財団研究年報. 15巻. 57-64 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Itokawa, Masanari, Yamada, Kazuo, Yoshitsugu, Kiyoshi, Toyota, Tomoko, Suga, Toshiro, Ohba, Hisako, Watanabe, Akiko, Hattori, Eiji, Shimizu, Hiromitsu, Kumakura, Tetsuo, Ebihara, Mitsuru, Meerabux, Joanne MA, Toru Michio, Yoshikawa, Takeo: "A microsatellite repeat in the promoter of the N-methyl-d-aspartate receptor 2A subunit (GRIN2A) gene suppresses transcriptional activity and correlates with chronic outcome in schizophrenia"Pharmacogenetics. Vol.13. 271-278 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ebihara, M., Ohba, H., Hattori, E., Yamada, K., Takeo Yoshikawa, T.: "Transcriptional activities of cholecystokinin promoter haplotypes and their relevance to panic disorder susceptibility"American Journal of Medical Genetics Neuropsychiatric Genetics. Vol.118(B). 32-35 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ebihara, M., Ohba, H., Ohno, S., Yoshikawa, T: "Genomic organization and promoter analysis of the human nicotinic acetylcholine receptor a6 subunit (CHNRA6) gene : Alu and other elements direct transcriptional repression"Gene. Vol.298. 101-108 (2002)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hattori E., Yamada K., Ebihara M., Toyota T., Nankai M., Shibuya H., Yoshikawa T.: "Association study of the short tandem repeat in the 5' upstream region of the cholecystokinin gene with mood disorders in the Japanese population"American Journal of Medical Genetics. Vol.114. 523-526 (2002)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ebihara, M., Ohba, H., Ohno, S., Yoshikawa, T.: "Genomic organization and promoter analysis of the human nicotinic acetylcholine receptor a6 subunit (CHNRA6) gene : Alu and other elements direct transcriptional repression"Gene. 298. 101-108 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Ebihara, M., Ohba, H., Hattori, E., Yamada, K., Takeo Yoshikawa, T.: "Thanscriptionai activities of cholecystokinin promoter haplotypes and their relevance to panic disorder susceptibility."American Journal of Medical Genetics. Neuropsychiatric Genetics. (in press). (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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