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Functional Analysis of Red-Green Pigment Gene Mutations in Congenital Color Vision Deficiencies

Research Project

Project/Area Number 14571667
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Ophthalmology
Research InstitutionShiga University of Medical Science

Principal Investigator

YAMADE Shinichi  Shiga University of Medical Science, Department of Ophthalmology, Associate Professor, 医学部, 助教授 (40117916)

Co-Investigator(Kenkyū-buntansha) UEYAMA Hisao  Shiga University of Medical Science, Department of Medical Biochemistry, Associate Professor, 医学部, 助教授 (30127013)
ODA Sanae  Shiga University of Medical Science, Department of Ophthalmology, Research Associate, 医学部, 助手 (90335175)
Project Period (FY) 2002 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2004: ¥500,000 (Direct Cost: ¥500,000)
Fiscal Year 2003: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2002: ¥1,600,000 (Direct Cost: ¥1,600,000)
Keywordscongenital color vision defects / red-green (L-M) pigment genes / promoter / genetic carriers / dichromat (P,D) / anomalous trichromat (PA,DA) / pigment color defect (PCD) / 先天赤緑色覚異常 / 視色素(L, M)遺伝子 / アミノ酸置換 / ロングPCR / TEX28遺伝子 / パルスフィールド電気泳動法 / 視色素(L,M)遺伝子 / 視色素遺伝子 / オプシン / 吸収スペクトル / 点変異
Research Abstract

1.We analyzed 230 color-normal Japanese males and revealed that the frequencies of polymorphisms at codons 180,296 in the L pigment gene and at codon 283 in the M pigment gene were different from those of Caucasian males.
2.The substitution (-71A>C) in the promoter region, that we had newly found, was revealed to diminish the transcriptional activity of the promoter and to be possible cause of congenital color vision defects.
3.The frequencies of -71C in Japanese, Chinese and Thai males were 24.3% (56/230), 19.4% (19/98) and 7.7% (8/104) respectively. But the substitution was rare in Caucasians (2%, 1/50) and in African Americans (0%, 0/14).
4.The most upstream genes, downstream genes and the most downstream genes were amplified separately by PCR. Carrier status could be detected by analyzing these PCR products. Eleven of 117 color normal females were diagnosed as genetic carriers.
5.We analyzed 514 cases of color vision deficiencies including 463 male cases. These were 69 protanopes(P), 6 … More 2 protanomals(PA), 152 deuteranopes(D), 167 deuteranomals(DA) and 13 pigment color defects(PCD).
6.Genotypes of 69 P were 53 P-types, 11 PA-types,3 N (normal) types and 2 undetermined. Genotypes of 62 PA were 4 P-types, 50 PA-types, 4 N-types, 2 undetermined and 2 inverted N (M-L genes) types. Of 152 D, 128 were D-types, 4 were DA-types, 7 were N-types and 13 were undtermined. Of 167 DA, 106 were DA-types, 14 D-types, 26 N-types and 21 were undetermined. All of 13 PCD had N type genes and -71C substitutioa Of 88 phenotype-genotype inconsistent cases 53 cases had -71C substitution, missense mutations such as Asn94Lys,Gly338Glu,Cys203Arg,Pro231Leu,2 bp-deletion in exon 5 or 11 bp-deletion in exon 3. These were understandable cases.
7.Seventeen inconsistent cases remained not understandable. There were 18 anomalous trichromats (should have 2 types of L or M cones), whose genotype were found to be dichromat (having only one type of L or M gene). Further investigation for these cases is required to clarify the phenotype-genotype relationships of congenital red-green color vision deficiencies. Less

Report

(4 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • 2002 Annual Research Report
  • Research Products

    (17 results)

All 2004 2003 2002 Other

All Journal Article (11 results) Publications (6 results)

  • [Journal Article] Analysis of L-cone/M-cone visual pigment gene arrays in Japanese males with protan color-vision deficiency.2004

    • Author(s)
      Hisao Ueyama
    • Journal Title

      Vision Research 44

      Pages: 2253-2267

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] An insertion/deletion TEX28 polymorphism and its application to analysis of red/green visual pigment gene arrays.2004

    • Author(s)
      Hisao Ueyama
    • Journal Title

      Journal of Human Genetics 49

      Pages: 548-557

    • NAID

      10013797686

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Analysis of L-cone/M-cone visual pigment gene arrays in Japanese males with protan color-vision deficiency.2004

    • Author(s)
      Hisao Ueyama, Shigeki Kuwayama, Hiroo Imai, Sanae Oda, Yasuhiro Nishida, Shoko Tanabe, Yoshinori Shichida, Shinichi Yamade
    • Journal Title

      Vision Research 44-19

      Pages: 2241-2252

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] An insertion/deletion TEX28 polymorphism and its application to analysis of red/green visual pigment gene arrays.2004

    • Author(s)
      Hisao Ueyama, Ryuzo Torii, Shoko Tanabe, Sanae Oda, Shinichi Yamade
    • Journal Title

      Journal of Human Genetics 49-10

      Pages: 548-557

    • NAID

      10013797686

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of L-cone/M-cone visual pigment gene arrays in Japanese males with protan color-vision deficiency.2004

    • Author(s)
      Hisao Ueyama
    • Journal Title

      Vision Research 44・19

      Pages: 2253-2267

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Analysis of L-cone/M-cone visual pigment gene arrays in females by long-range PCR2003

    • Author(s)
      Sanae Oda
    • Journal Title

      Vision Research 43

      Pages: 489-495

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] An A-71C substitution in a green gene at the second position in the red/green pigment gene array is associated with deutan color-vision deficiency2003

    • Author(s)
      Hisao Ueyama
    • Journal Title

      Proceedings of National Academy of Science, U.S.A. 100

      Pages: 3357-3362

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of L-cone/M-cone visual pigment gene arrays in females by lone-range PCR.2003

    • Author(s)
      Sanae Oda, Hisao Ueyama, Yasuhiro Nishida, Shoko Tanabe, Shinichi Yamade
    • Journal Title

      Vision Research 43-5

      Pages: 489-495

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] An A-71C substitution in a green gene at the second position in the red/green pigment gene array is associated with deutan color-vision deficiency.2003

    • Author(s)
      Hisao Ueyama, Yau-Hua Li, Gui-Lian Fu, Patcharee Lertrit, La-ongsri Atchaneeyasakul, Sanae Oda, Shoko Tanabe, Yasuhiro Nishida, Shinichi Yamade, Iwao Ohkubo
    • Journal Title

      Proceedings of National Academy of Science, U.S.A. 100-6

      Pages: 3357-3362

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Novel missense mutations in red/green opsin genes in congenital color-vision deficiencies2002

    • Author(s)
      Hisao Ueyama
    • Journal Title

      Biochemical and Biophysical Research Communications 294

      Pages: 205-209

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Novel missense mutations in red/green opsin genes in congenital color-vision deficiencies.2002

    • Author(s)
      Hisao Ueyama, Shigeki Kuwayama, Hiroo Imai, Shoko Tanabe, Sanae Oda, Yasuhiro Nishida, Akimori Wada, Yoshinori Shichida, Shinichi Yamade
    • Journal Title

      Biochemical and Biophysical Research Communications 294-2

      Pages: 205-209

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Sanae Oda: "Analysis of L-cone/M-cone visual pigment gene arrays in females by long-range PCR"Vision Research. 43・5. 489-495 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hisao Ueyama: "An A-71C substitution in a green gene at the second position in the red/green pigment gene array is associated with deutan color-vision deficiency"Proceedings of National Academy of Science, U.S.A.. 100・5. 3357-3362 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 山出 新一: "色覚の展望-2002年度-"眼科. 45・13. 1895-1915 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hisao Ueyama: "Novel missense mutations in red/green opsin genes in congenital color-vision deficiencies"Biochemical and Biophysical Research Communications. 294. 205-209 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Sanae Oda: "Analysis of L-cone/M-cone visual pigment gene arrays in females by long-range PCR"Vision Research. 43. 489-495 (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] Hisao Ueyama: "An A-71C substitution in a green gene at the second position in the red/green pigment gene array is associated with deutan color-vision deficiency"Proceedings of National Academy of Science, U.S.A.. 100. 3357-3362 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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