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In vitro evolution of SOD by DNA shufihing

Research Project

Project/Area Number 14571781
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional basic dentistry
Research InstitutionMatsumoto Dental University

Principal Investigator

HIRAOKA B.yukihiro  Matsumoto Dental University, Graduate School of Oral Medicine, Professor, 大学院・歯学独立研究科, 教授 (20097512)

Co-Investigator(Kenkyū-buntansha) OKUMURA Shigeki  Matsumoto Dental University, Dept of Oral Biochemistry, Research assosiate, 歯学部, 助手 (80350825)
Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2003: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2002: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsReactive oxygen / SOD / cambialistic / Metallo enzyme / Oxidoreductase / Porphyromanas gingivalis / Porphyromonas gingivalis / 歯周病原菌 / スーパーオキシドジスムターゼ / Porphyromanas gingivalis
Research Abstract

Mn-superoxide dismutases (SODs), Fe-SODs and cambiahistic SODs, its include P gingivalis (P.g.) SOD, have a large degree of sequence homology and X-ray structural similarity: the metal atoms are commonly ligated by three histidine residues, an aspartic acid residues and solvent molecule. We have prepared the mutant of the P.g. SOD with conversions of amino acid residues located near the active site using site-directed mutagenesis and DNA shuffling techniques.
[RESULTS] We made the Mn-and Fe-type mutation, by site-directed mutagenesis and expressed as a soluble fusion protein coupled to maltose binding protein (MBP) using the expression vector pMAL-c2. Enzymes were reconstituted with Mn or Fe by using an acid-guanidine-HCl method and purified to homogeneous by a hyroxyapatite-HPLC. Gly155Thr mutant SOD, reconstituted with Fe and Mn, analyzed an x-ray structure of the metal-reconstituted enzymes, and measured some properties of the enzymes. We found that this mutation changes the metal-specific activity drastically from a cambiahistic type to close to Fe-specific type. This is the first successful report among Fe-and Mn-SOD family to change the metal-specific activity not only drastically but also by a site-directed mutagenesis other than active site or second sphere. DNA shuffling and screening with paraquart methods, which consisted of a combination of cycles of random mutations and selection steps on the enzyme, provided the appropriate host strain for screening and conditions for random mutations.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (6 results)

All Other

All Publications (6 results)

  • [Publications] Hiraoka, B.Y., et al.: "Pronounced conversion of the metal-specific activity of superoxide dismutase from Porphyromonas gingivalis by the mutation of a single amino acid (Gly 155 Thr) located apart from the active site."Biochemistry-US. 42. 10790-10799 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamakura, F, et al.: "Structural bases for the conversion of the me tal-specific activity of Porphyromonas gingivalis superoxide dismutase by G155T mutation"生化学. 75. 796 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamakura, F.et al.Ohmori, D., Yokota, Y.: "*These authors contributed equally to this work. Pronounced conversion of the metal-specific activity of superoxide dismutase from Poiphyromonas. gingivalis by the mutation of a single amino acid (Gly155Thr) located a part from the active site."Biochemistry. 42. 10790-10799 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Yamakura, F. et al.: "Structural bases for the conversion of the me tal-specific activity of Porphyromonas gingivalis superoxide dismutase by G155T mutation"Seikagaku. 75. 796 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hiraoka, B.Y., et al.: "Pronounced conversion of the metal-specific activity of superoxide dismutase from Porphyromonas gingivalis by the mutation of a single amino acid (Gly 155 Thr) located apart from the active site."Biochemistry・US. 42. 10790-10799 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamakura.F.et al.: "Structural bases for the conversion of the metal-specific activity of Porphyromonas gingivalis superoxide dismutase by G155T mutation"生化学. 75. 796-796 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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