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Elucidation of the fine structure and the generation process of modified proteins (sulfonate, nitroso, et al.) application to clinical laboratory test

Research Project

Project/Area Number 14572189
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory medicine
Research InstitutionOsaka Medical College

Principal Investigator

SHIMIZU Akira  Osaka Medical College, Faculty of Medicine, Assistant, 医学部, 教授 (00028581)

Co-Investigator(Kenkyū-buntansha) MIYAZAKI Ayako  Osaka Medical College, Faculty of Medicine, Assistant, 医学部, 助手 (20298772)
NAKANISHI Toyofumi  Osaka Medical College, Faculty of Medicine, Lecturer, 医学部, 講師 (10247843)
岸川 匡彦  大阪医科大学, 医学部, 助手 (40268199)
Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2003: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2002: ¥2,200,000 (Direct Cost: ¥2,200,000)
KeywordsModified Protein / Sulfite Oxidase / Transthyretin / Mass Spectrometry / Electrospray / Immunoprecipitation / Homocysteine / Molybdenum cofactor deficiency / 質量分析
Research Abstract

Cysteine and cystine in protein are modified to various derivatives in vitro and in vivo. By electrospray ionization mass spectrometry (ESI-MS), we found derivatives of serum transthyretin (TTR) in which cysteine residue at position 10 was changed to glycine residue and sulfocysteine residue. The change, cysteine to glycine, was unique and the origin of the sulfonic acid group was controversial. In the present paper, we show the molecular masses of various TTR derivatives including these two, and the modification process was studied using a synthetic peptide with the same sequence as cysteine containing part of TTR, i.e., SKCPLMVK. After incubation of the peptide at pH 8.3, various derivatives were generated, which showed changes of cysteine residue to glycine, dehydroalanine, S-thiocysteine, and S-sulfocysteine residues, which were confirmed by molecular mass and collision-induced dissociation spectra. Dehydroalanine may react with other amino acids and contribute to form cross-linking fibril, causing amyloidosis.

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (24 results)

All Other

All Publications (24 results)

  • [Publications] Akira Shimizu, Toyofumi Nakanishi, Masahiko Kishikawa, Ayako Miyazaki: "Detection and Identification of Protein Variants and Adducts in Blood and Tissues : an Application of soft Ionization Mass Spectrometry to Clinical Diagnosis"Journal of Chromatography B. 776. 15-30 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Toyofumi Nakanishi, Ken Iguchi, Akira Shimizu: "Method for Hemoglobin A1c Measurement of HbA1c based on peptide analysis by ESI-mass sectrometry using deuterium-labeled synthetic peptides as internal standards"Clinical Chemistry. 49. 829-831 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Reiko Koyama, Toyoufumi Nakanishi, Tsunehiko Ikeda, Akira Shimizu: "Catalogue of soluble proteins in human vitreous humor by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrospray ionization mass spectrometry including seven angiogenesis-regulating factors"Journal of Chromatography B. 792. 5-21 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ayako Miyazaki, Toyofumi Nakanishi, Akira Shimizu, Kenichi Ninomiya, Satoshi Nishimura, Kiyohiro Imai: "HB BUZEN[β138(H16)Ala→Thr].A New β variant"Hemoglobin. 27. 243-247 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Jorn.Olivar.Sass, Toyofumi Nakanishi, Takako Sato, Wolfgang Sperl, Akira Shimizu: "S-Homocysteinylation of transthyretin is detected in plasma and serum of humans with different types of hyperhomocysteinemia"Biochemical and Biophysical Research Communications. 310. 242-246 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Toyofumi Nakanishi, Takako Sato, Saburo Sakoda, Masanori Yoshioka, Akira Shimizu: "Modification of cysteine residue in transthyretin and a synthetic peptide, analyses by electrospray ionization mass spectrometry"Biochimica et Biophysica Acta. 1698. 45-53 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Akira Shimizu, Toyofumi Nakanishi, Masahiko Kishikawa, Ayako Miyazaki: "Detection and Identification of Protein Variants and Adducts in Blood and Tissues : an Application of Soft Ionization Mass Spectrometry to Clinical Diagnosis."Journal of Chromatography B. 776(1). 15-30 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Toyofumi Nakanishi, Ken Iguchi, Akira Shimizu: "Method for Hemoglobin A1c measurement based on peptide analysis by ESI-mass spectrometry using deuterium-labeled synthetic peptides as internal standards."Clinical Chemistry. 49(5). 829-831 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Reiko Koyama, Toyofumi Nakanishi, Tsunehiko Ikeda, Akira Shimizu: "Catalogue of soluble proteins in human vitreous humor by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrospray ionization mass spectrometry including seven angiogenesis-regulating factors."Journal of Chromatography B. 792(1). 5-21 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ayako Miyazaki, Toyofumi Nakanishi, Akira Shimizu, Kenichi Ninomiya, Satoshi Nishimura, Kiyohiro Imai: "HB BUZEN [β 138(H16)Ala→Thr]. A new β variant."Hemoglobin. 27(4). 243-247 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Jorn.Oliver.Sass, Toyofumi Nakanishi, Takako Sato, Wolfgang Sperl, Akira Shimizu: "S-Homocysteinylation of transthyretin is detected in plasma and serum of humans with different types of hyperhomocysteinemia."Biochemical and Biophysical Research Communications. 310(1). 242-246 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Toyofumi Nakanishi, Takako Sato, Saburo Sakoda, Masanori Yoshioka, Akira Shimizu: "Modification of cysteine residue in transthyretin and a synthetic peptide, analyses by electrospray ionization mass"Biochimica et Biophysica Acta. 1698. 45-53 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Akira Shimizu, Toyofumi Nakanishi, Masahiko Kishikawa, Ayako Miyazaki: "Detection and Identification of Protein Variants and Adducts in Blood and Tissues : an Application of Soft Ionization Mass Spectrometry to Clinical Diagnosis"Journal of Chromatography B. 776. 15-30 (2002)

    • Related Report
      2003 Annual Research Report
  • [Publications] Toyofumi Nakanishi, Ken Iguchi, Akira Shimizu: "Method for Hemoglobin Alc Measurement of HbAlc based on peptide analysis by ESI-mass spectrometry using deuterium-labeled synthetic peptides as internal standards"Clinical Chemistry. 49. 829-831 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Reiko Koyama, Toyofumi Nakanishi, Tsunehiko Ikeda, Akira Shimizu: "Catalogue of soluble proteins in human vitreous humor by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrospray ionization mass spectrometry including seven angiogenesis-regulating factors"Journal of Chromatography B. 792. 5-21 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ayako Miyazaki, Toyofumi Nakanishi, Akira Shimizu, Kenichi Ninomiya, Satoshi Nishimura, Kiyohiro Imai: "HB BUZEN [β138(H16)Ala→Thr]. A new β variant"Hemoglobin. 27. 243-247 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Jorn.Oliver, Sass, Toyofumi NaKanishi, Takako Sato, Wolfgang Sperl, Akira Shimizu: "S-Homocysteinylation of transthyretin is detected in plasma and serum of humans with different types of hyperhomocysteinemia"Biochemical and Biophysical Research Communications. 310. 242-246 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Toyofumi Nakanishi, Takako Sato, Saburo Sakoda, Masanori Yoshioka, Akira Shimizu: "Modification of cysteine residue in transthyretin and a synthetic peptide, analyses by electrospray ionization mass spectrometry"Biochimica et Biophysica Acta. in press.

    • Related Report
      2003 Annual Research Report
  • [Publications] Masahiko Kishikawa, Jorn Oliver Sass, Nobuo Sakura, Toyofumi Nakanishi, Akira Shimizu, Masanori Yoshioka: "The Peak Height Ratio of S-Sulfonated Transthyretin and Other Oxidized Isoforms as a Marker for Molybdenum Cofactor Deficiency, Measured by Electrospray Ionization Mass Spectrometry"Biochimica et Biophysica Acta. 1588. 135-138 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Toyofumi Nakanishi, Ayako Miyazaki, Akira Shimizu, Akifumi Yamaguchi, Satoshi Nishimura: "Assessment of the Effect of Hemoglobin Variants on Routine HbA1c Measurements by Electrospray Ionization Mass Spectrometry"Clinica Chimica Acta. 323. 89-101 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Akira Shimizu, Toyofumi Nakanishi, Masahiko Kishikawa, Ayako Miyazaki: "Detection and Identification of Protein Variants and Adducts in Blood and Tissues : an Application of Soft Ionization Mass Spectrometry to Clinical Diagnosis"Journal of Chromatography B. 776. 15-30 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Toyofumi Nakanishi, Ken Iguchi, Akira Shimizu: "Measurement of HbA1c based on peptide analysis by ESI-mass spectrometry using deuterium-labeled synthetic peptides as internal standards"Clinical Chemistry. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] A.Miyazaki, T.Nakanishi, A.Shimizu, H.Hisamitsu: "The first case of a single heterozygote of an abnormal hemoglobin, Hb Stanmore, [b111(G13)Val→Ala]"Journal of Chromatography B. (in press).

    • Related Report
      2002 Annual Research Report
  • [Publications] Reiko Koyama, Toyofumi Nakanishi, Tsunehiko Ikeda, Akira Shimizu: "Catalogue of soluble proteins in human vitreous humor by one-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electrospray ionization mass apectrometry including seven angiogenesis-regulating factors"Journal of Chromatography B. (in press).

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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