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Construction of A Chemical Library of Unnatural Natural Products by Using Biosynthetic Enzymes

Research Project

Project/Area Number 14580613
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioorganic chemistry
Research InstitutionUniversity of Shizuoka

Principal Investigator

ABE Ikuro  Univ.Shizuoka, Sch.Pharm.Sci., Lecturer, 薬学部, 講師 (40305496)

Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2003: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2002: ¥2,800,000 (Direct Cost: ¥2,800,000)
KeywordsUnnatural products / Plant polyketide Synthase / Chalcone Synthase / Squalene Cyclase / Cyclic polypruoids / Biosynthetic enzymes / Library / Enzyme reaction / 酵素構造機能相関 / 酵素機能改変 / カルコン構成酵素 / スクレアン環化酵素
Research Abstract

1.Squalene cyclizing enzymes.
(1)Newly synthesized C_<35> polyprene was enzymatically converted to unnatural hexacyclic polyprenoid by squalene : hopene cyclase from Alicyclobacillus acidocaldarius. This is the first demonstration of the remarkable ability of the squalene cyclizing enzyme to perform construction of unnatural hexacyclic skeleton. Further, methylidene-extended squalene analogues were converted to unnatural pentacyclic novel polyprenoides by the enzyme. (2)Recombinant β-amyrin synthase from Pisum sativum converted 22,23-dihydro-2,3-oxidosqualene into bacchar-12-en-3β-ol ; the first demonstration of the enzymatic formation of the baccharene skeleton with a six-membered D-ring. It is remarkable that the formation of the anti-Markovnikov six-membered D-ring did not depend on he participation of the termianl π-electrons. Furthermore, the recombinant enzyme also converted 24,30-bisnor-2,3-oxidosqualene into 29,30-bisnor-β-amyrin.
2.Plant polyketide synthases (PKSs).
(1)Substrate … More specificities of plant polyketide synthases (PKSs) were investigated using analogs of malonyl-CoA and 4-coumaroyl-CoA, plant PKSs afforded an unnatural C_6-C_5 aromatic polyketide. In the chalcone synthase (CHS) reaction, it was shown that both the starter molecule and the extension unit of the poyketide chain elongation reaction could be simultaneously replaced with non-physiological substrates.
(2)One of the most characteristic features of benzalacetone synthase (BAS) is that it lacks active site Phe215 ; the residues ^<214>LF conserved in type III PKSs are uniquely replaced by IL. Our observation that BAS I214L/L215F mutant exhibited chalcone forming activity in pH dependent manner supported a hypothesis that the absence of Phe 215 in BAS accounts for the interruption of the polyketide chain elongation at the diketide stage. These results confirmed the critical role of Phe215 in the polyketide formation reactions and provided structural basis for understanding the structure-function relationship of the plant type III PKSs. Less

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (34 results)

All Other

All Publications (34 results)

  • [Publications] I.Abe, H.Tanaka, H.Noguchi: "Enzymatic Formation of an Unnatural Hexacyclic C35 Polyprenoid by Bacterial Squalene Cyclase"J.Am.Chem.Soc.. 124. 14514-14515 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe, Y.Sakano, H.Tanaka, W.Lou, H.Noguchi, M.Shibuya, Y.Ebizuka: "Enzymatic Cyclization of 22,23-Dihydro-2,3-oxidosqualene into Euph-7-en-3β-ol and Bacchar-12-en-3β-ol by Recombinant β-Amyrin Synthase"J.Am.Chem.Soc.. 126. 34326-3427 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe, Y.Sakano, M.Sodeyama, H.Tanaka, H.Noguchi, M.Shibuya, Y.Ebizuka: "Mechanism and Stereochemistry of Enzymatic Cyclization of 24,30-Bisnor-2,3- oxidosqualene by Recombinant β-Amyrin Synthase"J.Am.Chem.Soc.. 126(in press). (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Tanaka, H.Noguchi, I.Abe: "1-Methylidenesqualene and 25-Methylidenesqualene as Active-Site Probes for Bacterial Squalene : Hopene Cyclase"Org.Lett.. 6. 803-806 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] H.Tanaka, H.Noguchi, I.Abe: "Enzymatic Cyclization of 26- and 27-Methylidenesqualene to Novel Unnatural C_<31> Polyprenoids by Squalene : hopene Cyclase"Tetrahedron Lett.. 45. 3093-3096 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 阿部郁朗: "オキシドスクアレン閉環素の生物有機化学的研究"薬学研究の進歩. 18. 1-11 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe, Y.Sano, Y.Takahashi, H.Noguchi: "Site-Directed Mutagenesis of Benzalacetone Synthase : The Role of Phe215 in Plant Type III Polyketide Synthases"J.Biol.Chem.. 278. 25218-25226 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe, Y.Takahashi, H.Noguchi: "Enzymatic Formation of an Unnatural C6-C5 Aromatic Polyketide by Plant Type III Polyketide Synthases"Org.Lett.. 4. 3623-3626 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe, Y.Takahashi, W.Lou H.Noguchi: "Enzymatic Formation of Unnatural Novel Polyketides from Alternate Starter and Non-physiological Extension Substrate by Chalcone Synthase"Org.Lett.. 5. 1277-1280 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe, Y.Utsumi, S.Oguro, H.Noguchi: "The First Plant Type III Polyketide Synthase Catalyzing Formation of Aromatic Heptaketide"FEBS Lett.. 562. 171-176 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] 阿部郁朗: "植物ポリケタイド合成酵素の生合成工学と超天然型化合物ライブラリーの構築"蛋白質核酸酵素. 48. 2275-2285 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Hideya Tanaka, Hiroshi Noguchi: "Enzymatic Formation of an Unnatural Hexacyclic C35 Polyprenoid by Bacterial Squalene Cyclase."J.Am.Chem.Soc. 124. 14514-14515 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Yuichi Sakano, Hideya Tanaka, Weiwei Lou, Hiroshi Noguchi, Masaaki Shibuya, Yutaka Ebizuka: "Enzymatic Cyclization of 22,23-Dihydro-2,3-oxidosqualene into Euph-7-en-3β-ol and Bacchar-12-en-3β-ol by Recombinant β-Amyrin Synthase."J.Am.Chem.Soc. 126. 3426-3427 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Yuichi Sakano, Megumi Sodeyama, Hideya Tanaka, Hiroshi Noguchi, Masaaki Shibuya, Yutaka Ebizuka: "Mechanism and Stereochemistry of Enzymatic Cyclization of 24,30-Bisnor-2,3-oxidosqualene by Recombinant β-Amyrin Synthase."J.Am.Chem.Soc. 126(in press). (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hideya Tanaka, Hiroshi Noguchi, Ikuro Abe: "1-Methylidensequalene and 25-Methylidenesqualene as Active-Site Probes for Bacterial Squalene : Hopene cyclase."Org.Lett.. 6. 803-806 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hideya Tanaka, Hiroshi Noguchi, Ikuro Abe: "Enzymatic cyclization of 26-and 27-methylidenesqualene to novel unnatural C31 polyprenoids by squalene : hopene cyclase."Tet.Lett.. 45. 3093-3096 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe: "Bioorganic Studies on Oxidosqualene Cyclase."Advances in Pharmaceutical Sciences(in Japanese). 18. 1-11 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Yukie Sano, Yusuke Takahashi, Hiroshi Noguchi: "Site-Directed Mutagenesis of Benzalacetone Synthase : The Role of Phe215 in Plant Type III Polyketide Synthases."J.Biol.Chem.. 278. 25218-25226 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Yusuke Takahashi, Hiroshi Noguchi: "Enzymatic Formation of an Unnatural C6-C5 Aromatic Polyketide by Plant Type III Polyketide Synthases."Org.Lett.. 4. 3623-3626 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Yusuke Takahashi, Weiwei Lou, Hiroshi Noguchi: "Enzymatic Formation of Unnatural Novel Polyketides from Alternate Starter and Non-physiological Extension Substrate by Chalcone Synthase."Org.Lett.. 5. 1277-1280 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuro Abe, Yoriko Utsumi, Satoshi Oguro, Hiroshi Noguchi: "The First Plant Type III Polyketide Synthase Catalyzing Formation of Aromatic Heptaketide."FEBS Lett.. 562. 171-176 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Ikuo Abe: "Engineered Biosynthesis of Plant Polyketides."Protein, Nucleic Acid and Enzyme(in Japanese). 48. 2275-2285 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] I.Abe^*, Y.Sano, Y.Takahashi, H.Noguchi: "Site-Directed Mutagenesis of Benzalacetone Synthase : The Role of Phe215 in Plant Type III Polyketide Synthases"J.Biol.Chem.. 278. 25218-25226 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] I.Abe^*, Y.Sakano, H.Tanaka, W.Lou, H.Noguchi, M.Shibuya, Y.Ebizuka: "Enzymatic Cyclization of 22,23-Dihydro-2,3-oxidosqualene into Euph-7-en-3β-ol and Bacchar-12-en-3β-ol by Recombinant β-Amyrin Synthase"J.Am.Chem.Soc.. 126. 3426-3427 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Tanaka, H.Noguchi, I.Abe^*: "1-Methylidenesqualene and 25-Methylidenesqualene as Active-Site Probes for Bacterial Squalene : Hopene Cyclase"Org.Lett.. 6. 803-806 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] H.Tanaka, H.Noguchi, I.Abe^*: "Enzymatic Cyclization of 26- and 27-Methylidenesqualene to Novel Unnatural C_<31> Polyprenoids by Squalene : hopene Cyclase"Tetrahedron Lett.. 45. 3093-3096 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] I.Abe^*, Y.Utsumi, S.Oguro, H.Noguchi: "The First Plant Type III Polyketide Synthase Catalyzing Formation of Aromatic Heptaketide"FEBS Lett.. 562. 171-176 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 阿部郁朗: "植物ポリケタイド合成酵素の生合成工学と超天然型化合物ライブラリーの構築"蛋白質核酸酵素. 48. 2275-2285 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] I.Abe, H.Tanaka, H.Noguchi: "Enzymatic Formation of an Unnatural Hexacyclic C35 Polyprenoid by Bacterial Squalene Cyclase"J. Am. Chem. Soc.. 124. 14514-14515 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] I.Abe, Y.Takahashi, H.Noguchi: "Enzymatic Formation of an Unnnatural C6-C5 Aromatic Polyketide by Plant Type III Polyketide Synthases"Org. Lett.. 4. 3623-3626 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] I.Abe, Y.Takahashi, W.Lou, H.Noguchi: "Enzymatic Formation of Unnnatural Novel Polyketides from Alternate Starter and Non-phisiological Extension Substrate by Chalcone Synthase"Org. Lett.. 5(in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] I.Abe: "Galloyl Esters as Potent and Selective Inhibitors of Squalene Epoxidase"Recent Res. Devel. Biophys. Biochem.. (in press). (2003)

    • Related Report
      2002 Annual Research Report
  • [Publications] I.Abe: "Inhibition of Cholesterol Biogenesis by Tea Polyphenols"Foods Food Ingredients J. Jpn. 204. 12-16 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] I.Abe: "Search for Biologically Active Novel Compounds Based on Catalytic Mechanism of Biosynthetic Enzymes"Nat. Med.. (in press). (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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