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Mechanism of heme degradation by heme oxygenase and the interaction of heme

Research Project

Project/Area Number 14580641
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionYamagata University

Principal Investigator

YOSHIDA Tadashi  YAMAGATA UNIVERSITY SCHOOL OF MEDICINE, DEPARTMENT OF BIOCHEMISTRY, PROFESSOR, 医学部, 教授 (10004673)

Co-Investigator(Kenkyū-buntansha) ZHANG Xuhong  YAMAGATA UNIVERSITY SCHOOL OF MEDICINE, DEPARTMENT OF BIOCHEMISTRY, INSTRUCTOR, 医学部, 助手 (10292442)
SATO Michihiko  YAMAGATA UNIVERSITY SCHOOL OF MEDICINE, CENTRAL LABORATORY FOR RESEARACH AND EDUCATION, ASSOCIATE PROFESSOR, 医学部, 助教授 (00135344)
Project Period (FY) 2002 – 2003
Project Status Completed (Fiscal Year 2003)
Budget Amount *help
¥4,100,000 (Direct Cost: ¥4,100,000)
Fiscal Year 2003: ¥2,000,000 (Direct Cost: ¥2,000,000)
Fiscal Year 2002: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsHEME OXYGENASE / OXYGEN ACTIVATION / HYDROPEROXO SPECIES / meso-HYDROXYHEME / VERDOHEME / BILIVERDIN / CYANOBACTERIUM / Corynebacterium diphtheriae / 酸素活性化機構 / ヘムの分解 / CO / ビリルビン / ビリベルジン還元酵素
Research Abstract

Heme oxygenase catalyzes the regiospecific oxidation of hemin to biliverding IXα with concomitant liberation of CO and iron by three sequential mono-oxygenase reaction. (1) We studied the conversion of heme to α-meso-hydroxyheme by EPR. ENDOR, and optical absorption spectroscopy. The results obtained by these studies demonstrate that hydroperoxo ferric-HO is indeed the reactive species, directly forming the α-meso-hydroxyheme by attack of the distal OH of hydroperoxo moiety at the heme α-carbon. D140A mutant failed to convert heme to α-meso-hydroxyheme, confirming our previous finding that the H-bonding network within the distal pocket of HO is disrupted. (2) We investigated the stereoselectivity of each of the two reaction steps from meso-hydroxyhemin to verdoheme and versoheme to biliverdin, by using a truncated form of rat HO-1 and the chemically synthesized four isomers of meso-hydroxythemin and verdoheme. HO-1 converted all four isomers of meso-hydroxyhemin to the corresponding is … More omers of verdoheme. In contrast, only verdoheme IXα was converted to the corresponding biliverdin IXα. We conclude that the third step, but not the second, is stereoselective for the α-isomer substrate. (3) An efficient bacterial expression system of cyanobacterium Synechocystis sp. PCC 6803 HO gene, ho-1, has been constructed, using a synthetic gene. A soluble protein was expressed at high levels and was highly purified, for the first time. The spectroscopic characters as well as the catabolic activities strongly suggest that, in spite of very high conservation of the primary structure, the heme pocket structure of Synechocystis HO-1 is different from that of rat HO. (4) Crystal structure of the ferric and ferrous heme complexes of HemO, a 24-kDA HO of Corynebacterium diphtheriae, have been refined to 1.4 and 1.5 A resolustion, respectively. The heme pocket architecture is responsible for stabilization of the ferric hydroperoxo-active intermediated by preventing premature hydrolytic O-O bond cleavage. Less

Report

(3 results)
  • 2003 Annual Research Report   Final Research Report Summary
  • 2002 Annual Research Report
  • Research Products

    (20 results)

All Other

All Publications (20 results)

  • [Publications] Davydof, R.: "Catalytic mechanism of heme oxygenase through EPR and ENDOR of cryoreduced oxy-heme oxygenase"Journal of American Chemical Society. 124. 1798-1808 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Denisov, IG.: "Cryogenic absorption spectra of hydroperoxo-ferric heme oxygenase"FEBS Letters. 532. 203-206 (2002)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Zhang, X.: "Stereoseclectivity of each of the three steps of the heme oxygenase reaction"Biochemistry. 42. 7418-7426 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Migita, CT.: "Expression and characterization of cyanobacterium heme oxygenase, a key enzyme in the phycobilin synthesis."European Journal of Biochemistry. 270. 687-698 (2003)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hirotsu, S.: "The crystal structures of the ferric and ferrous forms of the heme complex of HmuO"Journal of Biological Chemistry. 279. 11937-11947 (2004)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Davydof R et al.: "Catalytic mechanism of heme oxygenase through EPR and ENDOR of cryoreduced oxy-heme oxygenase and its Asp 140 mutants."J Am Chem. 124. 1798-1808 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Denisov IG et al.: "Cryogenic absorption spectra of hydroperoxo-ferric heme oxygenase, the active intermediate of enzymatic heme oygenatgion."FEBS Lett. 532. 203-206 (2002)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Zhang X et al.: "Streoselectivity of each of the three steps of the heme oxygenase reaction: hemin to meso-hydroxyhemin, meso-hydroxyhemin to verdoheme, and verdoheme to biliverdin."Biochemistry. 42. 7418-7426 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Migita CT et al.: "Expression and characterization of cyanobacterium heme oxygenase, a key enzyme in the phycobilin synthesis. Properties of the heme complex of recombinant active enzyme."Eur J Biochem. 270. 687-698 (2003)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Hirotsu S et al.: "The crystal structure of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae."J Biol Chem. 279. 11937-11947 (2004)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2003 Final Research Report Summary
  • [Publications] Catharina, T.Migita: "Expression and characterization of cyanobacterium heme oxygenase, a key enzyme in the phycobilin synthesis"European Journal of Biochemistry. 270・2. 687-698 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Shoko Hirotsu: "The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium"The Journal of Biological Chemistry. 279(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Masaki Ueno: "Crystal structure of the dioxygen-bound heme oxygenal from Corynebacterium Dphtheriae"The Journal of Biological Chemistry. 279(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Hiroshi Fujii: "Essential amino acid residues controlling the unique regioselectivity of heal oxygenase in Psoudommes aeruginase"Journal of American Chemical Society. 126(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Xuhong Zhang: "Unique features of recombinant heme oxygenase of Drosophila melanogaster compared with those of other heme oxygenase studied"European Journal of Biochemistry. 271(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Xuhong Zhang: "Stereoselectivity of each of the three steps of the heme oxygenase reaction : Hemin to meso-hydroxyhemin, to verdoheme"Biochemistry. 42. 7418-7426 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Roman Davydov: "Catalytic mechanism of heme oxygenase through EPR and ENDOR of cryoreduced oxy-heme oxygenase and its Asp 140 mutants"Journal of American Chemical Society. 124・8. 1798-1808 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Shinji Susa: "Heme inhibits the mitochondrial import of coproporphyrinogen oxidase"BLOOD. 100・13. 4678-4679 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] I.lia J.Denisov: "Cryogenic absorption spectra of hydroperoxo-ferric heme oxygenase, the active intermediate of enzymatic heme oxygenation"FEBS Letters. 532. 203-206 (2002)

    • Related Report
      2002 Annual Research Report
  • [Publications] Catharina, T. Migita: "Expression and characterization of cyanobacterium heme oxygenase, a key enzyme in the phycobilin synthesis"European Journal of Biochemistry. 270・2. 687-698 (2003)

    • Related Report
      2002 Annual Research Report

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Published: 2002-04-01   Modified: 2016-04-21  

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