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リプログラミングの論理的制御による神経細胞の作製

Research Project

Project/Area Number 14F04775
Research Category

Grant-in-Aid for JSPS Fellows

Allocation TypeSingle-year Grants
Section外国
Research Field Molecular biology
Research InstitutionInstitute of Physical and Chemical Research

Principal Investigator

SHIN JAE・WOO  国立研究開発法人理化学研究所, ライフサイエンス技術基盤研究センター, ユニットリーダー (60553849)

Co-Investigator(Kenkyū-buntansha) LUGINBUEHL JOACHIM  国立研究開発法人理化学研究所, ライフサイエンス技術基盤研究センター, 外国人特別研究員
LUGINBUEHL Joachim  独立行政法人理化学研究所, ライフサイエンス技術基盤研究センター, 外国人特別研究員
Project Period (FY) 2014-04-25 – 2017-03-31
Project Status Completed (Fiscal Year 2016)
Budget Amount *help
¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 2016: ¥200,000 (Direct Cost: ¥200,000)
Fiscal Year 2015: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2014: ¥1,000,000 (Direct Cost: ¥1,000,000)
KeywordsInduced neurons / cell reprogramming / single cell sequencing / gene network / Cell Reprogramming / Single cell sequencing / Gene network
Outline of Annual Research Achievements

Single-cell RNA sequencing can disentangle highly diverse cell populations, and offers a way to unravel Transcriptional Regulatory Network (TRN) controlling cell-reprogramming. To this end, we generated a pool of 20 neuronal transcription factors (TFs) and sought to distinguish exogenous and endogenous TFs using single-cell RNAseq. Taking advantage of the dissimilarity of nucleotide sequences, we could identify exogenous and endogenous genes in induced neurons, and revealed a highly diverse subpopulation of induced neurons with defined gene signatures. We plan to perform validation experiments in collaboration with BSI/RIKEN. These results will be published within this fiscal year.

Research Progress Status

28年度が最終年度であるため、記入しない。

Strategy for Future Research Activity

28年度が最終年度であるため、記入しない。

Report

(3 results)
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • 2014 Annual Research Report
  • Research Products

    (3 results)

All 2017 2016 Other

All Journal Article (1 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 1 results,  Open Access: 1 results,  Acknowledgement Compliant: 1 results) Presentation (1 results) (of which Int'l Joint Research: 1 results) Remarks (1 results)

  • [Journal Article] The essentiality of non-coding RNAs in cell reprogramming2017

    • Author(s)
      Joachim Luginbuehl, Divya Mundackal Sivaraman, Jay W. Shin
    • Journal Title

      Non-coding RNA research

      Volume: 2 Issue: 1 Pages: 74-82

    • DOI

      10.1016/j.ncrna.2017.04.002

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Presentation] Inferring transcriptional regulatory networks controlling neuron subtype specification from human IPSC2016

    • Author(s)
      Joachim Luginbuehl
    • Organizer
      CiRA/ISSCR 2016 International Symposia
    • Place of Presentation
      Kyoto University, Japan
    • Year and Date
      2016-03-22
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Remarks] RIKEN Cell Conversion Technology Team

    • URL

      http://www.clst.riken.jp/en/science/labs/dgt/omics/cct/

    • Related Report
      2016 Annual Research Report

URL: 

Published: 2015-01-22   Modified: 2024-03-26  

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