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Structural study of signal transduction by membrane receptors through protein-protein interactions

Research Project

Project/Area Number 15083102
Research Category

Grant-in-Aid for Scientific Research on Priority Areas

Allocation TypeSingle-year Grants
Review Section Biological Sciences
Research InstitutionKyoto University (2004-2008)
Yokohama City University (2003)

Principal Investigator

SHIRAKAWA Masahiro  Kyoto University, 大学院・工学研究科, 教授 (00202119)

Co-Investigator(Kenkyū-buntansha) 廣明 秀一  横浜市立大学, 大学院・統合理学研究科, 助教授 (10336589)
朽尾 豪人 (栃尾 豪人)  横浜市立大学, 大学院・統合理学研究科, 助手 (70336593)
Project Period (FY) 2003 – 2008
Project Status Completed (Fiscal Year 2008)
Budget Amount *help
¥81,700,000 (Direct Cost: ¥81,700,000)
Fiscal Year 2008: ¥15,000,000 (Direct Cost: ¥15,000,000)
Fiscal Year 2007: ¥15,000,000 (Direct Cost: ¥15,000,000)
Fiscal Year 2006: ¥14,600,000 (Direct Cost: ¥14,600,000)
Fiscal Year 2005: ¥14,600,000 (Direct Cost: ¥14,600,000)
Fiscal Year 2004: ¥15,000,000 (Direct Cost: ¥15,000,000)
Fiscal Year 2003: ¥7,500,000 (Direct Cost: ¥7,500,000)
KeywordsNMR / 結晶構造解析 / 膜たんぱく質 / 免疫 / 膜受容体 / 立体構造 / X線結晶構造解析法 / インターロイキン / 膜蛋白質 / 小胞輸送 / SUMO / G蛋白質共役受容体 / 生理活性ペプチド / 細胞内輸送 / ペロキシソーム / ユビキチン
Research Abstract

本研究期間中に、チミンDNAグリコシラーゼ(TDG)についてSUMO-3化されたTDGの中央領域の立体構造を論文発表し、非共役型のSUMO-1/TDGの中央領域の立体構造、を解析した。またMCAF1のSUMO結合領域(SIM)とSUMO-3の複合体の立体構造をNMRにより決定した。岐阜大学医学研究科の加藤善一郎博士らとの共同研究により、Myd88のTIRドメインの立体構造をNMRによって決定し、さらにシグナル伝達に関与する分子表面残基を解析した。

Report

(7 results)
  • 2008 Annual Research Report   Final Research Report ( PDF )
  • 2007 Annual Research Report
  • 2006 Annual Research Report
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (76 results)

All 2009 2008 2007 2006 2005 2004 2003 Other

All Journal Article (56 results) (of which Peer Reviewed: 14 results) Presentation (14 results) Book (1 results) Patent(Industrial Property Rights) (3 results) Publications (2 results)

  • [Journal Article] Dual-Function Probe to Detect Protease Activity for Fluorescence Measurement and 19F MRI.2009

    • Author(s)
      Mizukami, S., Takikawa, R., Sugihara, F., Shirakawa, M. and Kikuchi, K.
    • Journal Title

      Angewandte Chemie International Edition (Published Online)

    • Related Report
      2008 Final Research Report
  • [Journal Article] High-resolution multi-dimensional NMR spectroscopy of proteins in human cells.2009

    • Author(s)
      Inomata, K., Ohno, A., Tochio, H., Isogai, S., Tenno, T., Nakase, I., Takeuchi, T., Futaki, S., Ito, Y., Hiroaki, H, and Shirakawa, M.
    • Journal Title

      Nature 458

      Pages: 106-109

    • Related Report
      2008 Final Research Report
  • [Journal Article] Protein structure determination in living cells by in-cell NMR spectroscopy.2009

    • Author(s)
      Sakakibara, D., Sasaki, A., Ikeya, T., Hamatsu, J., Hanashima, T., Mishima, M., Yoshimasu, M., Hayashi, N., Mikawa, T., Walchli, M., Smith, B. O., Shirakawa, M., Guntert, P. and Ito, Y.
    • Journal Title

      Nature 458

      Pages: 102-105

    • Related Report
      2008 Final Research Report
  • [Journal Article] Molecular basis for SUMOylation-dependent regulation of DNA binding activity of Heat Shock Factor 2.2009

    • Author(s)
      Tateishi, Y., Ariyoshi, M., Igarashi, R., Hara, H., Mizuguchi, K., Seto, A., Nakai, A., Kokubo, T., Tochio, H. and Shirakawa, M.
    • Journal Title

      Journal of Biological Chemistry 284

      Pages: 2435-2447

    • Related Report
      2008 Final Research Report
  • [Journal Article] Dual-Function Probe to Detect Protease Activity fo rFluorescence Measurement and 19F MRI2009

    • Author(s)
      Mizukami, S., Takikawa, R., Sugihara, F., Shirakawa, M. and Kikuchi, K.
    • Journal Title

      Angewandte Chemie International Edition (Publisbed Online)

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] High-resolution multi-dimensional NMR spectroscopy of proteins in human cells2009

    • Author(s)
      Inomata, R., Ohno, A., Tochio, H. Isogai, S., Tenno, T., Maltase, I., Takeuchi, T., Futaki, S., Ito, Y., Hiroaki, H, and Shirakawa
    • Journal Title

      Nature 458

      Pages: 106-109

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Protein structure determination in living cells by in-cell NMR spectroscopy2009

    • Author(s)
      sakakloara, D., sasakl, A., lkeya, l., Aamatsu, j.,Aanasnlma,T., Mishima, M., Yoshimasu, M., Hayashi, N., Mikawa, T., Walchli. M., Smith. B. O., Shirakawa. M., Guntert. P. and Ito
    • Journal Title

      Nature 458

      Pages: 102-105

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular basis for SUMOylation-dependent regulation of DNA binding activity of Heat Shock Factor 22009

    • Author(s)
      Tateishi, Y., Ariyoshi, H., Igarashi, R., Hara, H., Mizuguchi, K., Seto, A., Nakai, A., Kolcubo, T., Tochio, H. and Shirakawa, M
    • Journal Title

      Journal of Biological Chemistry 284

      Pages: 2435-2447

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structure of the SUMO-interacting motif of MBD1-containing chromatin associated factor 1 (MCAF1) bound to SUMO-3.2008

    • Author(s)
      Sekiyama, N., Ikegami, T., Yamane, T., Ikeguchi, M., Uchimura, Y., Baba, D., Ariyoshi, M., Tochio, H., Saitoh, H. and Shirakawa, M.
    • Journal Title

      Journal of Biological Chemistry 283

      Pages: 35966-35975

    • Related Report
      2008 Final Research Report
  • [Journal Article] Hemi-methylated DNA recognition by the SRA protein Np95 via a base flipping mechanism.2008

    • Author(s)
      Arita, K., Ariyoshi, M., Tochio, H., Nakamura, Y. and Shirakawa, M.
    • Journal Title

      Nature 455

      Pages: 818-821

    • Related Report
      2008 Final Research Report
  • [Journal Article] The solution structure of the C-terminal domain of NfeD reveals a novel membrane-anchored OB-fold.2008

    • Author(s)
      Kuwahara, Y., Ohno, A., Morii, T., Yokoyama, H., Matsui, I., Tochio, H., Shirakawa, M., and Hiroaki, H.
    • Journal Title

      Protein Science 17

      Pages: 1915-1924

    • Related Report
      2008 Final Research Report
  • [Journal Article] Expression, purification, and a structural analysis of human IL-18 binding protein : A potent therapeutic molecule for allergy.2008

    • Author(s)
      Kimura, T., Kato, Z., Ohnishi, H., Tochio, H., Shirakawa, M., Kondo, N.
    • Journal Title

      Allergology International 4

    • NAID

      10025108541

    • Related Report
      2008 Final Research Report
  • [Journal Article] Intracellular protein delivery activity of peptides derived from insulin-like growth factor binding proteins 3 and 5.2008

    • Author(s)
      Goda, N., Tenno, T., Inomata, K., Shirakawa, M., Tanaka, T., Hiroaki, H.
    • Journal Title

      Experimental Cell Research 314

      Pages: 2352-2361

    • Related Report
      2008 Final Research Report
  • [Journal Article] Kinetic and Thermodynamic evidence for flipping of a methyl-CpG binding domain on methylated DNA.2008

    • Author(s)
      Inomata, K., Ohki, I., Tochio, H., Fujiwara, K., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Biochemistry 47

      Pages: 3266-3271

    • Related Report
      2008 Final Research Report
  • [Journal Article] Paramagnetic Relaxation-Based 19F MRI Probe to Detect Protease.2008

    • Author(s)
      Mizukami, S., Takikawa, R., Sugihara, F., Hori, Y., Tochio, H., Waelchli, M., Shirakawa, M., Kikuchi, K.
    • Journal Title

      Activity Journal of the American Chemical Society 130

      Pages: 794-795

    • Related Report
      2008 Final Research Report
  • [Journal Article] Structure of the SUMO-interacting motif of MBD1-containing chromatin associated factor 1 (MCAF1) bound to SUMO-32008

    • Author(s)
      Sekiyama, N., Ikegami, T., Yamane, T., Ikeguchi, M., Uchimura, Y., Baba, D., Ariyoshi, M., Tochio, H., Saitoh, H. and Shirakawa, M
    • Journal Title

      Journal of Biological Chemistry 283

      Pages: 35966-35975

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Hemi-methylated DNA recognition by the SRA protein Np95 via a base flipping mechanism2008

    • Author(s)
      Arita, K., Ariyoshi, M., TOchio, H., Nakamura, Y. and Shirakawa
    • Journal Title

      Nature 455

      Pages: 818-821

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The solution structure .of the C-terminal domain of NfeD reveals a novel membrane-anchored OB-fold2008

    • Author(s)
      Kuwahara, Y., Ohno, A., Morii, T., Yokoyama, H., Matsui, I., Tochio, H., Shirakawa, M., and Hiroaki, H.
    • Journal Title

      Protein Science 17

      Pages: 1915-1924

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Expression, purification, and a structural analysis of human IL-18binding protein : A potent therapeutic molecule for allergy2008

    • Author(s)
      Kimura, T., Kato, Z., Ohnishi, H., Tochio, H., Shirakawa, M., Kondo, N.
    • Journal Title

      Allergology International 4

      Pages: 367-376

    • NAID

      10025108541

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Intracellular protein delivery activity of peptides derived from insulin-like growth factor binding proteins 3 and 52008

    • Author(s)
      Goda, Tenno, T., Inomata, K., Shirakawa, M., Tanaka, T., Hiroaki, H.
    • Journal Title

      Experimental Cell Research 314

      Pages: 2352-2361

    • Related Report
      2008 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Kinetic and Thermodynamic evidence for flipping of amethyl-CpG binding domain on methylated DNA.2008

    • Author(s)
      Inomata, K., Ohki, I., Tochio, H., Fujiwara, K., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Biochemistry 47

      Pages: 3216-3271

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Paramagnetic Relaxation-Based 19F MRI Probe to Detect Protease Activity.2008

    • Author(s)
      Mizukami, S., Takikawa, R., Sugihara, F., Hori, Y., Tochio, H., Waelchli, M., Shirakawa, M., Kikuchi, K.
    • Journal Title

      Journal of the American Chemical Society 130

      Pages: 794-795

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Structural Analysis of Pituitary Adenylate Cyclase-Activating polypeptides Bound to Phospholipid embranes by Magic Angle Spinning Solid-State NMR.2007

    • Author(s)
      Komi, N., Okawa, K., Tateishi, Y., Shirakawa, M., Fujiwara, T., Akutsu, H.
    • Journal Title

      Biochimica et Biophysica Acta -Biomembranes 1768

      Pages: 3001-3011

    • Related Report
      2008 Final Research Report
  • [Journal Article] Fluoroscopic assessment of protein leakage during Xenopus oocytes in-cell NMR experiment by co-injected EGFP.2007

    • Author(s)
      Sakai, T., Tochio, H., Inomata, K., Sasaki, Y., Tenno, T., Tanaka, T., Kokubo, T., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Analytical Biochemistry 371

      Pages: 247-249

    • Related Report
      2008 Final Research Report
  • [Journal Article] Characterization of the sequence specificity of the R1Bm endonuclease domain by structural and biochemical studies.2007

    • Author(s)
      Maita, N., Aoyagi, H., Osanai, M., Shirakawa, M., Fujiwara, H.
    • Journal Title

      Nucleic Acid Research 35

      Pages: 3918-3927

    • Related Report
      2008 Final Research Report
  • [Journal Article] Magnetic resonance-based visualization of gene expression in mammalian cells using a bacterial polyphosphate kinase reporter gene.2007

    • Author(s)
      Ki, S., Sugihara, F., Kasahara, K., Tochio, H., Shirakawa, M. and Kokubo, T.
    • Journal Title

      Biotechniques 42

      Pages: 209-215

    • Related Report
      2008 Final Research Report
  • [Journal Article] LBT/PTD dual tagged vector for purification, cellular protein delivery and visualization in living cells.2007

    • Author(s)
      Goda, N., Tenno, T., Inomata, K., Iwaya, N., Sasaki, Y., Shirakawa, M., Hiroaki, H.
    • Journal Title

      Biochemica et Biophysica Acta 1773

      Pages: 141-146

    • Related Report
      2008 Final Research Report 2006 Annual Research Report
  • [Journal Article] Distance determination in human ubiquitin by pulse double electron resonance and double quantum coherence ESR methods.2007

    • Author(s)
      Hara, H., Tenno, T. and Shirakawa, M.
    • Journal Title

      Journal of Magnetic Resonance 184

      Pages: 78-84

    • Related Report
      2008 Final Research Report
  • [Journal Article] Fine-tuning of protein domain boundary by minimizing potential coiled coil regions.2007

    • Author(s)
      Iwaya, N., Goda, N., Unzai, S., Fujiwara, K., Tanaka, T., Tomii, K., Tochio, H., Shirakawa, M. and Hiroaki, H.
    • Journal Title

      Journal of biomolecular NMR 37

      Pages: 53-63

    • Related Report
      2008 Final Research Report
  • [Journal Article] Structural Analysis of Pituitary Adenylate Cyclase-Activating polypeptides Bound to Phospholipid embranes by Magic Angle Spinning Solid-state NMR.2007

    • Author(s)
      Komi, N., Okawa, K., Tateishi, Y., Shirakawa, M., Fujiwara, T., Akutsu, H.
    • Journal Title

      Biochimica et Biophysica Acta-Biomembranes 1768

      Pages: 3001-3011

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fluoroscopic assessment of protein leakage during Xenopusoocytes in-cell NMR experiment by co-injected EGFP.2007

    • Author(s)
      Sakai, T., Tochio, H., Inomata, K., Sasaki, Y., Tenno, T., Tanaka, T., Kokubo, T., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Analytical Biochemistry 371

      Pages: 247-249

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Characterization of the sequence specificity of the R1Bm endonuclease domain by structural and biochemical studies.2007

    • Author(s)
      Maita, N., Aoyagi, H., Osanai, M., Shirakawa, M., Fujiwara, H.,
    • Journal Title

      Nucleic Acid Research 35

      Pages: 3918-3927

    • Related Report
      2007 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Distance determination in human ubiquitin by pulse double electron resonance and double quantum coherence ESR methods.2007

    • Author(s)
      Hara, H., Tenno, T., Shirakawa, M.
    • Journal Title

      Journal of Magnetic Resonance 184

      Pages: 78-84

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Fine-tuning of protein domain boundary by minimizing potential coiled coil regions.2007

    • Author(s)
      Iwaya, N., Goda, N., Unzai, S., Fujiwara, K., Tanaka, T., Tomii, K., Tochio, H., Shirakawa, M., Hiroaki, H.
    • Journal Title

      Journal of biomolecular NMR 37

      Pages: 53-63

    • Related Report
      2006 Annual Research Report
  • [Journal Article] In-Cell NMR Spectroscopy of Proteins inside Xenopus laevis Oocytes.2006

    • Author(s)
      Sakai, T., Tochio, H., Tenno, T., Ito, Y., Kokubo, T., Hiroaki, H. and Shirakawa, M.
    • Journal Title

      Journal of biomolecular NMR 36

      Pages: 179-188

    • Related Report
      2008 Final Research Report
  • [Journal Article] Crystal structure of SUMO-3-modified thymine-DNA glycosylase.2006

    • Author(s)
      Baba, D., Maita; N., Jee, J.-G., Uchimura, Y., Saitoh, H., Sugasawa, K., Hanaoka, F., Tochio, H., Hiroaki, H, Shirakawa, M.
    • Journal Title

      Journal of Molecular Biology 359

      Pages: 137-147

    • Related Report
      2008 Final Research Report 2006 Annual Research Report
  • [Journal Article] novel magnetic resonance-based method to measure gene expression in living cells.2006

    • Author(s)
      Ki, S., Sugihara, F., Kasahara, K., Tochio, H., Okada-Marubayashi, A., Tomita, S., Morita, M., Ikeguchi, M., Shirakawa, M. and Kokubo, T.
    • Journal Title

      Nucleic Acid Research 34

    • Related Report
      2008 Final Research Report
  • [Journal Article] The structure of the third intracellular loop of the muscarinic acetylcholine receptor M2 subtype.2006

    • Author(s)
      Ichiyama, S., Oka, Y., Haga, K., Kojima, S., Tateishi, Y., Shirakawa, M., and Haga, T.
    • Journal Title

      FEBS Letter 580

      Pages: 23-26

    • Related Report
      2008 Final Research Report
  • [Journal Article] In-Cell NMR Spectroscopy of Proteins inside Xenopus laevis Oocytes.2006

    • Author(s)
      Sakai, T., Tochio, H., Tenno, T., Ito, Y., Kokubo, T., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Journal of biomolecular NMR 36

      Pages: 179-188

    • Related Report
      2006 Annual Research Report
  • [Journal Article] The structure of the third intracellular loop of the muscarinic acetylcholine receptor M2 subtype.2006

    • Author(s)
      Ichiyama, S., Oka, Y., Haga, K., Kojima, S., Tateishi, Y., Sirakawa, M., Haga, T.
    • Journal Title

      FEBS Letter. 580

      Pages: 23-26

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Crystal Structure of thymine DNA glycosylase conjugated to SUMO-1.2005

    • Author(s)
      Baba, D., Maita, N., Jee, J.-G., Uchimura, Y., Saitoh, H., Sugasawa, K., Hanaoka, F., Tochio, H., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Nature 435

      Pages: 979-982

    • Related Report
      2008 Final Research Report
  • [Journal Article] The UBL-UBA protein KPC2 is required for degradation of p27 at G1 phase.2005

    • Author(s)
      Hara, T., Kamura, T., Kotoshiba, S., Fujiwara, K., Onoyama, I., Shirakawa, M. and Nakayama, K.-I.
    • Journal Title

      Molecular and Cellular Biology 25

      Pages: 9292-303

    • Related Report
      2008 Final Research Report
  • [Journal Article] Molecular mechanism of a temperature-sensitive phenotype in peroxisomal biogenesis disorder.2005

    • Author(s)
      Hashimoto, K., Kato, Z., Nagase, T., Shimozawa, N., Kuwata, K., Omoya, K., Li, A., Matsukuma, E., Yamamoto, Y., Ohnishi, H., Tochio, H., Shirakawa, M., Suzuki, Y., Wanders, R. J. A., Kondo, N.
    • Journal Title

      Pediatric Research 58

      Pages: 263-9

    • Related Report
      2008 Final Research Report
  • [Journal Article] Structural characterization of the MIT domain from human Vps4b.2005

    • Author(s)
      Takasu, H., Jee, J. G., Ohno, A., Goda, N., Fujiwara, K., Tochio, H., Shirakawa, M., and Hiroaki, H.
    • Journal Title

      Biochemical and Biophysical Research Communications 334

      Pages: 460-465

    • Related Report
      2008 Final Research Report
  • [Journal Article] Structure of the UBA domain of Dsk2p in complex with Ubiquitin : Molecular Determinants for Ubiquitin Recognition2005

    • Author(s)
      Ohno, A., Jee J-G, Fujiwara, K., Tenno, T., Goda, N., Tochio, H., Kobayashi, H., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Structure 13

      Pages: 521-532

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Crystal Structure of thymine DNA glycosylase conjugated to SUMO-12005

    • Author(s)
      Baba, D., Maita, N., Jee, J.-G., Uchimura Y.Saitoh H., Sugasawa, K., Hanaoka, F..Tochio, H., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Nature 435

      Pages: 979-982

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Molecular mechanism of a temperature-sensitive phenotype in peroxisomal biogenesis disorder2005

    • Author(s)
      Hashimoto, K., Kato, Z., Nagase, T., Shimozawa, N., Kuwata K., Omoya K., Li, A., Matsukuma, E., Yamamoto, Y., Ohnishi, H., Tochio, H., Shirakawa, M.
    • Journal Title

      Pediatric Research 58

      Pages: 263-269

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structural characterization of the MIT domain from human Vps4b.2005

    • Author(s)
      Takasu, H., Jee, J.G., Ohno, A., Goda, N., Fujiwara, K., Tochio, H., Shirakawa, M., Hiroaki, H.
    • Journal Title

      Biochemical and Biophysical Research Communications 334

      Pages: 460-465

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Backbone (1)H, (13)C, and (15)E.coli nickel binding protein NikA.2005

    • Author(s)
      Rajesh, S., Heddle, J.G., Kurashima-Ito, K., Nietlispach, D., Shirakawa, M., Tame, J.R., Ito, Y
    • Journal Title

      J Biomolecular NMR 32

      Pages: 117-117

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structure of the N-terminal domain of PEX1 AAA-ATPase : characterization of a putative adaptor-binding domain2004

    • Author(s)
      Shiozawa, K.Maita, N., Tomii, K, Seto, A., Goda, N., Akiyama, Y., Shimizu, T., Shirakawa, M., Hiroaki, H.
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 50060-50068

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Crystallographic characterization of the N-terminal domain of PEX12004

    • Author(s)
      Shiozawa, K., Maita, N., Tomii, K., Seto, A., Goda, N., Akiyama, Y., Shimizu, T., Shirakawa, M., Hiroaki, H.
    • Journal Title

      Acta Crystallography D Biological Crystallography 60

      Pages: 2098-2099

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Structural basis for distinctroles of Lys63- and Lys48-linked polyubiquitin chains.2004

    • Author(s)
      Tenno, T., Fujiwara, K., Tochio, H., Iwai, K., Morita, E.H., Hayashi, H., Murata, S., Hiroaki, H., Sato, M., Tanaka, K., Shirakawa, M.
    • Journal Title

      Genes to Cells 9

      Pages: 865-875

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Structure of human MTH1, a Nudix family hydrolase that selectively degrades oxidized purine nucleoside triphosphates2004

    • Author(s)
      Mishima, M., Sakai, Y., Itoh, N., Kamiya, H., Furuichi, M., Takahashi, M., Yamagata, Y., Iwai, S., Nakabeppu, Y., Shirakawa, M.
    • Journal Title

      Journal of Biological Chemistry 279

      Pages: 33806-33815

    • Related Report
      2004 Annual Research Report
  • [Journal Article] High-throughput expression vector of isotopically labeled peptides for use in NMR studies2004

    • Author(s)
      Tenno, T., Goda, N., Tateishi, Y., Tochio, H., Mishima, M., Shirakawa, M., Hiroaki, H.
    • Journal Title

      Protein Engineering, Design & Selection 17

      Pages: 305-314

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Structural basis for the multiple interactions of the MyD88 TIR domain in TLR4 signaling.

    • Author(s)
      Ohnishi, H., Tochio, H., Kato, Z., Orii, K., Li, A., Kimura, T., Hiroaki,H., Kondo, N., and Shirakawa, M.
    • Journal Title

      Proceedings of the National Academy of Science (in press)

    • Related Report
      2008 Final Research Report
  • [Journal Article] Structure of the UBA domain of Dsk2p in complex with Ubiquitin : Molecular Determinants for Ubiquitin Recognition

    • Author(s)
      Ohno, A., Jee, J-G, Fujiwara, K., Tenno, T., Goda, N., Tochio, H., Kobayashi, H., Hiroaki, H., Shirakawa, M.
    • Journal Title

      Structure (印刷中)

    • Related Report
      2004 Annual Research Report
  • [Presentation] In-cell NMR spectroscopy of proteins in human cells : study of protein interactions and dynamics2009

    • Author(s)
      白川昌宏
    • Organizer
      特定領域研究「膜インターフェイス」平成20年度公開シンポジウム
    • Place of Presentation
      千里ライフサイエンスセンター
    • Year and Date
      2009-01-23
    • Related Report
      2008 Annual Research Report
  • [Presentation] In-cell NMRによる細胞質内タンパク質の構造、機能解析2008

    • Author(s)
      白川昌宏
    • Organizer
      第31回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Year and Date
      2008-12-11
    • Related Report
      2008 Final Research Report
  • [Presentation] In-cell NMRによる細胞質内タンパク質の構造,機能解析2008

    • Author(s)
      白川昌宏
    • Organizer
      第31回日本分子生物学会年会・第81回日本生化学会大食合同大会
    • Place of Presentation
      神戸ポートアイランド
    • Year and Date
      2008-12-11
    • Related Report
      2008 Annual Research Report
  • [Presentation] In-cell NMRによる細胞内タンパク質の構造、機能の観察2008

    • Author(s)
      白川昌宏
    • Organizer
      第8回日本蛋白質科学会
    • Place of Presentation
      東京
    • Year and Date
      2008-06-11
    • Related Report
      2008 Final Research Report
  • [Presentation] In-Cell NMR spectroscopy of proteins2008

    • Author(s)
      白川昌宏
    • Organizer
      日本蛋白質科学会年会
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2008-06-10
    • Related Report
      2008 Annual Research Report
  • [Presentation] NMRとMRIを使った細胞内反応の非侵襲計測2007

    • Author(s)
      白川昌宏
    • Organizer
      日本化学会第87春季年会
    • Place of Presentation
      大阪
    • Year and Date
      2007-03-29
    • Related Report
      2008 Final Research Report
  • [Presentation] SUMO化によるチミンDNAグリコシラーゼ機能調整2006

    • Author(s)
      白川昌宏
    • Organizer
      第6回日本蛋白質科学会年会
    • Place of Presentation
      京都
    • Year and Date
      2006-04-26
    • Related Report
      2008 Final Research Report
  • [Presentation] SUMOコードの謎を解く2005

    • Author(s)
      白川昌宏
    • Organizer
      第28回分子生物学会年会
    • Place of Presentation
      福岡
    • Year and Date
      2005-12-10
    • Related Report
      2008 Final Research Report
  • [Presentation] 蛋白質修飾による蛋白質の構造変化を捉える-ユビキチン化・SUMO化蛋白質の調製とX線構造解析2005

    • Author(s)
      白川昌宏
    • Organizer
      日本結晶学会2005年度年会
    • Place of Presentation
      姫路
    • Year and Date
      2005-12-07
    • Related Report
      2008 Final Research Report
  • [Presentation] SUMO化による蛋白質の機能・構造変換の構造学的研究2004

    • Author(s)
      白川昌宏
    • Organizer
      第27回日本分子生物学会年会
    • Place of Presentation
      神戸
    • Year and Date
      2004-12-08
    • Related Report
      2008 Final Research Report
  • [Presentation] NMR structural biology of protein-nucleic acid recognition2004

    • Author(s)
      白川昌宏
    • Organizer
      第43回NMR討論会
    • Place of Presentation
      東京
    • Year and Date
      2004-11-11
    • Related Report
      2008 Final Research Report
  • [Presentation] 化学修飾による核内制御-DNAメチル化とたんぱく質のユビキチン化2004

    • Author(s)
      白川昌宏
    • Organizer
      日本薬学会124年会
    • Place of Presentation
      大阪
    • Year and Date
      2004-03-30
    • Related Report
      2008 Final Research Report
  • [Presentation] SUMO化による蛋白質の機能変換の構造学的研究2003

    • Author(s)
      白川昌宏
    • Organizer
      第26回日本分子生物学会
    • Place of Presentation
      神戸
    • Year and Date
      2003-12-11
    • Related Report
      2008 Final Research Report
  • [Presentation] uaternary structure of polyubiquitin chains2003

    • Author(s)
      白川昌宏
    • Organizer
      第76回日本生化学会大会
    • Place of Presentation
      横浜
    • Year and Date
      2003-10-17
    • Related Report
      2008 Final Research Report
  • [Book] 5.2.1たんぱく質 実験化学講座第5版 日本化学会編8 NMR・ESR2006

    • Author(s)
      杤尾豪人、白川昌宏
    • Publisher
      丸善株式会社
    • Related Report
      2008 Final Research Report
  • [Patent(Industrial Property Rights)] 変異導入MyD88蛋白によるToll様受容体/インターロイキン18シグナルの特異的制御法2007

    • Inventor(s)
      近藤直実、加藤善一郎、大西秀典、白川昌宏、杤尾豪人
    • Industrial Property Rights Holder
      財団法人大阪産業振興機構、国立大学法人大阪大学、国立大学法人京都大学
    • Industrial Property Number
      2007-200776
    • Filing Date
      2007-08-01
    • Related Report
      2008 Final Research Report
  • [Patent(Industrial Property Rights)] MRI用プローブ2007

    • Inventor(s)
      菊地和也、水上進、滝川利佳、白川昌宏
    • Industrial Property Rights Holder
      財団法人大阪産業振興機構、国立大学法人大阪大学、国立大学法人京都大学
    • Industrial Property Number
      2007-273956
    • Filing Date
      2007-10-22
    • Related Report
      2008 Final Research Report 2007 Annual Research Report
  • [Patent(Industrial Property Rights)] 変異導入MyD88蛋白によるToll様受容体/インターロイキン18シグナルの特異的制御法2007

    • Inventor(s)
      近藤 直実、加藤善一郎、大西 秀典、白川 昌宏、杤尾 豪人
    • Industrial Property Number
      2007-200776
    • Filing Date
      2007-08-01
    • Related Report
      2007 Annual Research Report
  • [Publications] Auesukaree, C., Homma, T., Tochio, H., Shirakawa, M.Kaneko, Y., Harashima, S.: "Intracellular phosphate serves as a signal for the regulation of the PHO pathway in Saccaromyces cerevisiae"Journal of Biological Chemistry.

    • Related Report
      2003 Annual Research Report
  • [Publications] Goda, N., Tenno, T., Takasu, H., Hiroaki, H., Shirakawa, M.: "The PRESAT-vector. Asymmetric T-vector for high throughput screening of soluble protein domains for structural proteomics"Protein Science. 13. 652-658 (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2018-03-28  

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