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Resistance to UVB radiation in plant

Research Project

Project/Area Number 15201010
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Risk sciences of radiation/Chemicals
Research InstitutionTohoku University

Principal Investigator

KUMAGAI Tadashi  Tohoku University, Graduate School of Life Sciences, Professor, 大学院・生命科学研究科, 教授 (90089805)

Co-Investigator(Kenkyū-buntansha) YAMAMOTO Kazuo  Tohoku University, Graduate School of Life Sciences, Professor, 大学院・生命科学研究科, 教授 (20093536)
HIDEMA Jun  Tohoku University, Graduate School of Life Sciences, Associate Professor, 大学院・生命科学研究科, 助教授 (20250855)
TANAKA Atsushi  JAPAN atomic energy agency, radiation-applied biology division, senior researcher, 量子ビーム応用研究部門バイオ応用技術研究ユニット, ユニット長 (80343911)
YANO Masahiro  National institute of agrobiological sciences, department of molecular genetics, senior researcher, 分子遺伝研究グループ応用遺伝研究チーム, チーム長 (50355749)
UEDA Tadamasa  National institute of agrobiological sciences, department of molecular genetics, researcher, 分子遺伝研究グループ応用遺伝研究チーム, 研究員 (80355750)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥46,020,000 (Direct Cost: ¥35,400,000、Indirect Cost: ¥10,620,000)
Fiscal Year 2005: ¥14,950,000 (Direct Cost: ¥11,500,000、Indirect Cost: ¥3,450,000)
Fiscal Year 2004: ¥13,000,000 (Direct Cost: ¥10,000,000、Indirect Cost: ¥3,000,000)
Fiscal Year 2003: ¥18,070,000 (Direct Cost: ¥13,900,000、Indirect Cost: ¥4,170,000)
Keywordsultraviolet-B / resistance mechanism / cyclobutane pyrimidine dimer / photolyase / plant / rice / ion beam / QTL analysis / イオンブーム / 耐性機器
Research Abstract

1. The difference in UVB sensitivity among rice cultivars is caused by a structure/function alteration of photolyase due to one or two amino acids changes, and the CPD photolyase activity is a crucial factor for determining UVB sensitivity in rice.
2. Rice plants with higher CPD photolyase activity by overexpressing CPD photolyase gene showed extremely stronger resistance to UVB-caused growth inhibition, whereas rice plants with lower CPD photolyase activity by insertion of antisense CPD photolyase gene showed extremely higher sensitivity to UVB.
3. To clarify the function of rice class II CPD photolyase, effects of alterations of deduced amino acids in CPD photolyase on enzyme activity was investigated using rice CPD photolyase expressed in E.coli. Amino acids Gln296, Ser282 and Ser285 functioned as a FAD binding site. On the other hand, W344 and Y419 worked for binding to neither FAD nor CPD, but play an important role in enzyme activity.
4. UV-sensitive mutant (rev3-1) and UV-resistant mutant (uvi4) in Arabidopsis were isolated and characterized. 1)Disrupted mutant of AtREV3, a gene for the putative catalytic subunit of Arabidopsis DNA polymerase ζ, was found to be sensitive to UVB and various DNA-damaging agents. 2)Positional cloning revealed that the uvi4 gene encoded a novel basic protein with unknown function. The hypocotyl cells in uvi4 underwent one extra round of endo-reduplication, and the enhanced polyploidization was responsible for the increased UVB tolerance of the uvi4 mutant.
5. Three QTLs associated with UVB resistance on chromosomes 1, 3, and 10, using backcross inbred lines were derived from a cross between an indica cultivar "Kasalath" (UV-sensitive) and a japonica cultivar "Nipponbare" (UV-resistant). Among the QTLs, qUVR-10 for UVB resistance was cloned by map-based strategy. The qUVR-10 contained encoded the CPD photolyase gene.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (36 results)

All 2006 2005 2004 2003 Other

All Journal Article (29 results) Book (2 results) Publications (5 results)

  • [Journal Article] Sensitivity of rice to ultraviolet-B radiation.2006

    • Author(s)
      Hidema J.
    • Journal Title

      Annals of Botany (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Sensitivity of rice to ultraviolet-B radiation.2006

    • Author(s)
      Hidema J.
    • Journal Title

      Annals of Botany (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Spontaneously occurring mutations in the cyclobutane pyrimidine dimer photolyase gene cause different sensitivities to ultraviolet-B in rice.2005

    • Author(s)
      Hidema J.
    • Journal Title

      The Plant Journal 43

      Pages: 57-67

    • NAID

      130006992163

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] qUVR-10, a major quantitative trait locus for ultraviolet-B resistance in rice, encodes cyclobutane pyrimidine dimer photolyase.2005

    • Author(s)
      Ueda T.
    • Journal Title

      Genetics 171

      Pages: 1941-1950

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Changes in grain size and grain storage protein of rice (Oryza sativa L.) in response to elevated UV-B radiation under outdoor conditions.2005

    • Author(s)
      Hidema J.
    • Journal Title

      Journal of Radiation Research 46

      Pages: 143-149

    • NAID

      110004041109

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] CPD photolyase gene from spinacia oleracea : repair of UV-damaged DNA and expression in plant organs.2005

    • Author(s)
      Yoshihara R.
    • Journal Title

      Journal of Radiation Research 46

      Pages: 157-164

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Roles of Arabidopsis AtREV1 and AtREV7 in translesion synthesis.2005

    • Author(s)
      Takahashi S.
    • Journal Title

      Plant Physiology 138

      Pages: 870-881

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] イネの紫外線抵抗性は何が決めているか -DNA損傷回復酵素の役割2005

    • Author(s)
      岩松 優
    • Journal Title

      化学と生物 43

      Pages: 72-74

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] CPD Photolyase Gene from Spinacia oleracea : repair of UV-damaged DNA and expression in plant organs.2005

    • Author(s)
      Yoshihara R.
    • Journal Title

      Journal of Radiation Research 46

      Pages: 157-164

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Spontaneously occurring mutations in the cyclobutane pyrimidine dimer photolyase gene cause different sensitivities to ultraviolet-B in rice2005

    • Author(s)
      J.Hidema
    • Journal Title

      Plant Journal 43

      Pages: 57-67

    • NAID

      130006992163

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Changes in grain size and grain storage protein of rice (Oryza Sativa L.) in response to elevated UV-B radiation under outdoor conditions2005

    • Author(s)
      J.Hidema
    • Journal Title

      Journal of Radiation Research 46

      Pages: 143-149

    • NAID

      110004041109

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Characteristics of UV-sensitive or -resistant rice (Oryza sativa) mutants2005

    • Author(s)
      J.Hidema
    • Journal Title

      JAEA-Review (TIARA Annual Report 2004)

      Pages: 78-80

    • Related Report
      2005 Annual Research Report
  • [Journal Article] CPD photolyase gene from Spinacia oleracea : repair of UV-damaged DNA and expression in plant organs2005

    • Author(s)
      R.Yoshihara
    • Journal Title

      Journal of Radiation Research 46

      Pages: 157-164

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Roles of Arabidopsis AtREV1 and AtREV7 in translesion synthesis2005

    • Author(s)
      S.Takahashi
    • Journal Title

      Plant Physiology 138

      Pages: 870-881

    • Related Report
      2005 Annual Research Report
  • [Journal Article] qUVR-10, a major quantitative trait locus for ultraviolet-B resistance in rice, encodes cyclobutane pyrimidine dimer photolyase2005

    • Author(s)
      T.Ueda
    • Journal Title

      Genetics 171

      Pages: 1941-1950

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Changes in gram size and grain storage protein of rice(Oryza sativa L.) in response to elevated UV-B radiation under outdoor conditions2005

    • Author(s)
      J.Hidema, W.H.Zhang, M.Yamamoto, T.Sato, T.Kumagai
    • Journal Title

      Journal of Radiation Research (印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] イネの紫外線抵抗性は何が決めているか-DNA損傷光回復酵素の役割2005

    • Author(s)
      岩松優, 日出間純, 熊谷忠
    • Journal Title

      化学と生物 43・2

      Pages: 72-74

    • NAID

      10016570219

    • Related Report
      2004 Annual Research Report
  • [Journal Article] CYD photolyase gene from Spinacia aleracea : repair of UV-clonaged DNA and expression in plant organs2005

    • Author(s)
      R.Yoshihara, S.Imaki, M.horii, C.Watanabe, K.Yamamoto, K.Takimoto
    • Journal Title

      Journal of Radiation Research (印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Ultraviolet-B Sensitivities in Japanese lowland rice cultivars : cyclobutane pyrimidine dimer photolyase activity and gene mutation.2004

    • Author(s)
      Teranishi M.
    • Journal Title

      Plant and Cell Physiology 45

      Pages: 1848-1856

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Delimitation of the chromosomal region for a quantitative trait locus, qUVR-10, conferring resistance to ultraviolet-B radiation in rice (Oryza sativa L.).2004

    • Author(s)
      Ueda T.
    • Journal Title

      Theoretical Applied Genetics 108

      Pages: 385-391

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Ultraviolet-B sensitivities in Japanese lowland rice cultivars : cyclobutane pyrimidine dimer photolyase activity and gene mutation.2004

    • Author(s)
      Teranishi M.
    • Journal Title

      Plant and Cell Physiology 45

      Pages: 1848-1856

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Ultraviolet-B sensitivities in Japanese lowland rice cultivars : cyclobutane pyrimidine dimer photolyase activity and gene mutation2004

    • Author(s)
      M.Teranishi, Y.Iwamatsu, J.Hidema, T.Kumagai
    • Journal Title

      Plant Cell Physiology 45(12)

      Pages: 1848-1856

    • NAID

      10014214720

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Disruption of the AtREV3 gene causes hypersensitivity to ultraviolet B light and γ-rays in Arabidopsis : implication of the presence of a translesion synthesis mechanism in plants.2003

    • Author(s)
      Sakamoto A.
    • Journal Title

      The Plant Cell 15

      Pages: 2042-2057

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Higher amounts of anthocyanins and UV-absorbing compounds effectively lowered CPD photorepair in purple rice(Oryza sativa L.).2003

    • Author(s)
      Hada H.
    • Journal Title

      Plant,Cell and Environment 26

      Pages: 1691-1701

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A gene for a Class II DNA photolyase from Oryza sativa : cloning of the cDNA by dilution-amplification.2003

    • Author(s)
      Hirouchi T.
    • Journal Title

      Molecular Genetics and Genetics 269

      Pages: 508-516

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mapping of quantitative trait loci associated with ultraviolet-B resistance in rice(Oryza sativa L.).2003

    • Author(s)
      Sato T.
    • Journal Title

      Theoretical Applied Genetics 107

      Pages: 1003-1008

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Higher amounts of anthocyanins and UV-absorbing compounds effectively lowered CPD photorepair in purple rice (Oryza sativa L.)2003

    • Author(s)
      Hada H.
    • Journal Title

      Plant, Cell and Environment 26

      Pages: 1691-1701

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A gene for a Class II DNA photolyase from Oryza sativa : cloning of the cDNA by dilution-amplification.2003

    • Author(s)
      Hirouchi T.
    • Journal Title

      Molecular Genetics and Genomics 269

      Pages: 508-516

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mapping of quantitative trait loci associated with ultraviolet-B resistance if rice, (Oryza sativa L.)2003

    • Author(s)
      Sato T.
    • Journal Title

      Theoretical Applied Genetics 107

      Pages: 1003-1008

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] Ultraviolet B Radiation sensitivity in rice2005

    • Author(s)
      Kumagai T.
    • Total Pages
      85
    • Publisher
      Research Signpost, Trivandrum, Kerala, India
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] Ultraviolet B radiation sensitivity in rice (ISBN:81-7736-252-6)2005

    • Author(s)
      Kumagai T.
    • Publisher
      Research Signpost, Trivandrum, Kerala, India
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] H.Hada: "Higher amounts of anthocyanins and UV-absorbing compounds effectively lowered CPD photorepair in purple rice (Oryza sativa L.)"Plant & Cell Environment. 26. 1691-1701 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Hirouchi: "A gene for a Class II DNA photolyase from Oryza sativa : cloning of the cDNA by dilution-amplification"Molecular Genetics and Genomics. 269. 508-516 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Sakamoto: "Disruption of the AtREV3 gene causes hypersensitivity to ultraviolet B light and -rays in Arabidopsis : Implication of the presense of a translesion synthesis mechanism in plants"The Plant Cell. 15. 2042-2057 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Sato: "Mapping of quantitative trait loci associated with ultraviolet-B resistance in rice (Oryza sativa L.)"Theoretical and Applied Genetics. 107. 1003-1008 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Ueda: "Delimitation of the chromosomal region for a quantitative trait locus, qUVR-10, conferring resistance to ultraviolet-B radiation in rice (Oryza sativa L.)"Theoretical and Applied Genetics. 108. 385-391 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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