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Studies on Genetic Diversity of Ancient Chinese Populations and its Temporal Changes

Research Project

Project/Area Number 15255008
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Anthropology
Research InstitutionThe University of Tokyo

Principal Investigator

UEDA Shintaroh  The University of Tokyo, Graduate School of Science, Professor, 大学院理学系研究科, 教授 (20143357)

Co-Investigator(Kenkyū-buntansha) SAITOU Naruya  National Institute of Genetics, Department of Population Genetics, Professor, 集団遺伝研究系, 教授 (30192587)
KUROSAKI Kunihiko  Toho University, School of Medicine, Professor, 医学部, 教授 (60240701)
Project Period (FY) 2003 – 2006
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥22,880,000 (Direct Cost: ¥17,600,000、Indirect Cost: ¥5,280,000)
Fiscal Year 2005: ¥6,500,000 (Direct Cost: ¥5,000,000、Indirect Cost: ¥1,500,000)
Fiscal Year 2004: ¥7,930,000 (Direct Cost: ¥6,100,000、Indirect Cost: ¥1,830,000)
Fiscal Year 2003: ¥8,450,000 (Direct Cost: ¥6,500,000、Indirect Cost: ¥1,950,000)
KeywordsChina / Human Evolution / Genetic Diversity / Temporal Change / Carbonized Rice / Mitochondria / Ancient Remains / Japanese
Research Abstract

DNAs contained in ancient biological materials are relatively preserved for a long time. This means ancient DNA could be advantageous to direct analysis of the past. Recent advances in biotechnology, especially techniques of DNA amplification by Polymerase Chain Reaction (PCR) and nucleotide sequence determination using fluorescent dideoxynucleotides, enable us to obtain DNA information from ancient remains easier. We previously examined the mitochondrial DNA (mtDNA) sequences of three populations that lived in the same location, Linzi, China, in different periods : 2,500 years ago (the Spring-Autumn era), 2,000 years ago (the Han era), and the present day. Two indices were used to compare the genetic differences: the frequency distributions of the radiating haplotype groups and the genetic distances among the populations. The results indicate that the genetic backgrounds of the three populations are distinct from each other. Inconsistent with the geographical distribution, the 2,500-year-old Linzi population showed greater genetic similarity to present-day European populations than to present-day east Asian populations. The 2,000-yearold Linzi population had features that were intermediate between the present-day European/2,5oo-year-old Linzi populations and the present-day east Asian populations. These relationships suggest the occurrence of drastic spatiotemporal changes in the genetic structure of Chinese people during the past 2,500 years. In this research project, to make clear spatiotemporal spread of the European-like lineage in ancient China, we collected human remains from ca. 3,000-year-old Yin ruins (the Shang era), collaborating with colleagues belonging to Chinese Academy of Sciences and Chinese Academy of Social Sciences. A series of genetic investigations involving DNA extract from remains, DNA amplification by PCR, nucleotide sequence determination, and phylogenetic analysis are in progress.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (34 results)

All 2006 2005 2004 2003 Other

All Journal Article (30 results) Book (3 results) Publications (1 results)

  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci.2006

    • Author(s)
      Li, S.
    • Journal Title

      Human Genetics 118

      Pages: 695-707

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Relationship between genetic and linguistic differentiation of people2006

    • Author(s)
      Saitou, N.
    • Journal Title

      Proceedings of the Pre-symposium of RIHN and 7th ESCA Harvard-Kyoto Roundtable

      Pages: 220-226

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Rapid and simple analysis of oxazolobenzodiazepine drugs in sera by wide-bore capillary gas chromatography with nitrogen-phosphorus detection using on-column methylation.2006

    • Author(s)
      Terada, M.
    • Journal Title

      Forensic Toxicol. 24

      Pages: 58-64

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Phylogenetic relationship of the populations within and around Japan using 105 short tandem repeat polymorphic loci.2006

    • Author(s)
      Li S.L., Yamamoto T., Yoshimoto T., Uchihi R., Mizutani M., Kurimoto Y., Tokunaga K., Jin F., Katsumata Y., Saitou N.
    • Journal Title

      Human Genetics 118

      Pages: 695-707

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Relationship between genetic and linguistic differentiation of people in Eurasia.2006

    • Author(s)
      Saitou N.
    • Journal Title

      Proceedings of the Pre-symposium of RIHN and 7th ESCA Harvard-Kyoto Roundtable

      Pages: 220-222

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Rapid and simple analysis of oxazolobenzodiazepine drugs in sera by wide-bore capillary gas chromatography with nitrogen-phosphorus detection using on-column methylation.2006

    • Author(s)
      Terada M., Shinozuka T., Tanaka E., Honda K., Kurosaki K.
    • Journal Title

      Forensic Toxicol. 24

      Pages: 58-64

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evolutionary scenario for acquisition of CAG repeats in human SCA1 gene.2006

    • Author(s)
      Kurosaki, T.
    • Journal Title

      Gene (印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Identification of a bronze weapon based on an embedded fragment in a 3,000-year-old skull.2005

    • Author(s)
      Kurosaki, K.
    • Journal Title

      Forensic Sci. Int. 151

      Pages: 105-108

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evolution of hominoids and the search for a genetic basis for creating humanness.2005

    • Author(s)
      Saitou, N.
    • Journal Title

      Cytogenetic and Genome Research 108

      Pages: 16-21

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Identification of a bronze weapon based on an embedded fragment in a 3,000-year-old skull.2005

    • Author(s)
      Kurosaki K., Wang L., Tang J., Wang W., Saitou N., Endo T., Ueda S.
    • Journal Title

      Forensic Sci. Int. 151

      Pages: 105-108

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evolution of hominoids and the search for a genetic basis for creating humanness.2005

    • Author(s)
      Saitou N.
    • Journal Title

      Cytogenetic and Genome Research 108

      Pages: 16-21

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The neuronal POU transcription factor Brn-2 interacts with Jab1, a gene involved in the onset of neurodegenerative diseases.2005

    • Author(s)
      Huang, Y-T
    • Journal Title

      Neuroscience Letters 382・1/2

      Pages: 175-178

    • Related Report
      2005 Annual Research Report
  • [Journal Article] The neuronal POU transcription factor Brn-2 interacts with Jabl, a gene involved in the onset of neurodegenerative diseases.2005

    • Author(s)
      Huang, Y-T.
    • Journal Title

      Neuroscience Letters (In press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Molecular evolution of a microRNA cluster in the PWS/AS region among mammals.2005

    • Author(s)
      Onishi, K.
    • Journal Title

      Gene (In press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Identification of a bronze weapon based on an embedded fragment in a 3,000-year-old skull.2005

    • Author(s)
      Kurosaki, K.
    • Journal Title

      Forensic Science International (In press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Human-specific amino acid changes found in 103 protein-coding Genes.2004

    • Author(s)
      Kitano, T.
    • Journal Title

      Mol. Biol. Evol. 21

      Pages: 936-944

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evolution of O alleles of the human ABO blood group gene.2004

    • Author(s)
      Roubinet, F.
    • Journal Title

      Transfusion 44

      Pages: 707-715

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Different response to exogenous L-arginine in nitric oxide production between hippocampus and striatum of conscious rats : a microdialysis study.2004

    • Author(s)
      Hara, S.
    • Journal Title

      Neurosci Lett. 366

      Pages: 302-307

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Characterization of hydroxyl radical generation in the striatum of free-moving rats due to carbon monoxide poisoning, as determined by in vivo microdialysis.2004

    • Author(s)
      Hara, S.
    • Journal Title

      Brain Res. 1016

      Pages: 281-284

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Human-specific amino acid changes found in 103 protein-coding genes.2004

    • Author(s)
      Kitano T., Liu Y-H., Ueda S., Saitou N.
    • Journal Title

      Mol. Biol. Evol. 21

      Pages: 936-944

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evolution of 0 alleles of the human ABO blood group gene.2004

    • Author(s)
      Roubinet F., Despiau S.-P., Calafell F., Jin F., Bertanpetit J., Saitou N., Blancher A.
    • Journal Title

      Transfusion 44

      Pages: 707-715

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Different response to exogenous L-arginine in nitric oxide production between hippocampus and striatum of conscious rats : a microdialysis study.2004

    • Author(s)
      Hara S., Mukai T., Kurosaki K., Mizukami H., Kuriiwa F, Endo T.
    • Journal Title

      Neurosci Lett. 366

      Pages: 302-307

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Characterization of hydroxyl radical generation in the striatum of free-moving rats due to carbon monoxide poisoning, as determined by in vivo microdialysis.2004

    • Author(s)
      Hara S., Mukai T., Kurosaki K., Kuriiwa F, Endo T.
    • Journal Title

      Brain Res. 1016

      Pages: 281-284

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Human-specific amino acid changes found in 103 protein-coding genes.2004

    • Author(s)
      Kitano, T.
    • Journal Title

      Molecular Biology and Evolution 21・5

      Pages: 936-944

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Characterization of suppression of nitric oxide production by carbon monoxide poisoning in the striatum of free-moving rats, as determined by in vivo brain microdialysis.2003

    • Author(s)
      Hara, S.
    • Journal Title

      Brain Res. 979

      Pages: 27-36

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genome-scale detection of tandemly-duplicated gene structures.2003

    • Author(s)
      Onishi, K.
    • Journal Title

      Genome Informatics 14

      Pages: 466-467

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Netview : application software for constructing and visually exploring phylogenetic networks.2003

    • Author(s)
      Kryukov, K.
    • Journal Title

      Genome Informatics 14

      Pages: 280-281

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Characterization of suppression of nitric oxide production by carbon monoxide poisoning in the striatum of free-moving rats, as determined by in vivo brain microdialysis.2003

    • Author(s)
      Hara S., Mukai T., Kurosaki K., Kuriiwa F, Endo T.
    • Journal Title

      Brain Res. 979

      Pages: 27-36

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genome-scale detection of tandemly-duplicated gene structures.2003

    • Author(s)
      Onishi K., Zhang H., Tamura T., Gojobori T., Ueda S.
    • Journal Title

      Genome Informatics 14

      Pages: 466-467

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Netview : application software for constructing and visually exploring phylogenetic networks.2003

    • Author(s)
      Kryukov K., Saitou N.
    • Journal Title

      Genome Informatics 14

      Pages: 280-281

    • NAID

      130003811847

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] 進化学「第2巻 : 遺伝子とゲノムの進化」2006

    • Author(s)
      植田, 信太郎
    • Total Pages
      285
    • Publisher
      岩波書店
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] 歴史街道 7732004

    • Author(s)
      植田, 信太郎
    • Total Pages
      298
    • Publisher
      新人物往来社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] 中世総合資料学の提唱2003

    • Author(s)
      植田, 信太郎
    • Total Pages
      292
    • Publisher
      新人物往来社
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] 植田信太郎(共著): "中世総合資料学の提唱"新人物往来社. 292 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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