• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Development of new restoration system for functional structures of proteins

Research Project

Project/Area Number 15350103
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemistry related to living body
Research InstitutionKyoto Institute of Technology

Principal Investigator

KUNUGI Shigeru  Kyoto Institute of Technology, Vice-President, 副学長 (70111929)

Co-Investigator(Kenkyū-buntansha) TANAKA Naoki  Kyoto Institute of Technology, Faculty of Textile Science, Associate Professor, 繊維学部, 助教授 (60243127)
松本 雅光  テラメックス(株), 特機部, 課長
吉田 絵里  京都工芸繊維大学, 繊維学部, 助手 (60263175)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥15,000,000 (Direct Cost: ¥15,000,000)
Fiscal Year 2005: ¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2004: ¥4,900,000 (Direct Cost: ¥4,900,000)
Fiscal Year 2003: ¥6,400,000 (Direct Cost: ¥6,400,000)
KeywordsHigh pressure / Protein / Synthetic polymer / Refolding / Chaperone
Research Abstract

The appropriate three dimensional structures are required for the high and specific functions of proteins. However, the general mechanism of converting sequential amino acid alignments into three dimensional structures is still ambiguous. Especially, irreversible denaturation or unfolding of proteins artificially formed by way of genetic engineering methods is a big problem.
In this project, a new protein structure restoration or refolding system has been studied. There have been several attempts for protein structure restoration. They can be grouped into three categories : a-biochemical, b-chemical, and c-physicochemical. We have mainly introduced pressure as one the factor classed into c, and combined with chemical or biochemical methods.
As the first stage, some biomimetic polymers such as an elastin-model peptide, stimulus-responsive synthetic polymers, have been investigated for their pressure-temperature responsive properties (structural stability and restoration). Then, structural stability and aggregation properties of several proteins, including phosphoglycerate kinase, a double-domain protein, kumamolisin, a single-domain protein, and insulin, amyloid-forming protein, have been studied. In addition, similarity and dissimilarity of proteins and biomimetic polymers including their hydro gels have been precisely compared.
For the biochemical method, active-site fragments of molecular chaperone are targeted. Some active fragments have been prepared from cloned genes of DnaJ, ClpB and other molecular chaperones, and they were immobilized onto hydrophobic domain of phospholipid liposomes or micro-particles, to be utilized as the structure-restoration devices.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (18 results)

All 2006 2005 2004 Other

All Journal Article (15 results) Publications (3 results)

  • [Journal Article] Pre-incubation under High Pressure Accelerates Amyloid Formation from Insulin2006

    • Author(s)
      Fujimoto Y., Tanaka N., Kunugi S.
    • Journal Title

      Polymer J. 38(3)

      Pages: 302-305

    • NAID

      10017315208

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Synergetic Effects of Pressure and Chemical Denaturant on Protein Unfolding : Stability of a Serine-type Carboxyl Protease, kumamolisin2006

    • Author(s)
      Fujimoto Y., Ikeuchi H., Tada T., Oyama H., Oda K., Kunugi S.
    • Journal Title

      Biochim.Biophys.Acta Proteins & Proteomics (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Pre-incubation under High Pressure Accelerates Amyloid Formation from Insulin.2006

    • Author(s)
      Fujimoto Y., Tanaka N., Kunugi S.
    • Journal Title

      Polymer J. 38(3)

      Pages: 302-305

    • NAID

      10017315208

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Synergetic Effects of Pressure and Chemical Denaturant on Protein Unfolding : Stability of a Serine-type Carboxyl Protease, kumamolisin.2006

    • Author(s)
      Fujimoto Y., Ikeuchi H., Tada T., Oyama H., Oda K., Kunugi S.
    • Journal Title

      Biochim.Biophys.Acta Proteins & Proteomics (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Synergetic Effects of Pressure and Chemical Denaturant on Protein Unfolding :Stability of a Serine-type Carboxyl Protease, kumamolisin2006

    • Author(s)
      Fujimoto Y., Ikeuchi H., Tada T., Oyama H., Oda K., Kunugi S.
    • Journal Title

      Biochim.Biophys.Acta Proteins & Proteomics doi:10.1016/j.bba pap.2005.12.010(in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Differences in the Pressure and Temperature Transitions : Proteins and Polymer Gels.2005

    • Author(s)
      Kunugi S., Kameyama K., Tada T., Tanaka N., Shibayama M., Akashi M.
    • Journal Title

      Braz.J.Med.Biol.Res. 38(8)

      Pages: 1233-1238

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Temperature- and pressure-responsive properties of L- and DL- forms of poly(N-(1-hydroxymethyl)propylmethacrylamide in aqueous solutions2005

    • Author(s)
      Seto Y., Aoki, T., Kunugi S.
    • Journal Title

      Colloid Polym.Sci. 283(10)

      Pages: 1137-1142

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Temperature- and pressure-responsive properties of L- and DL- forms of poly(N-(1-hydroxymethyl) propylmethacrylamide in aqueous solutions.2005

    • Author(s)
      Seto Y., Aoki T., Kunugi S.
    • Journal Title

      Colloid Polym.Sci. 283(10)

      Pages: 1137-1142

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Differences in the Pressure and Temperature Transitions :Proteins and Polymer Gels.2005

    • Author(s)
      Kunugi S., Kameyama K., Tada T., Tanaka N., Shibayama M., Akashi M.
    • Journal Title

      Braz.J.Med.Biol.Res. 38(8)

      Pages: 1233-1238

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Temperature- and pressure-responsive properties of L- and DL- forms of poly(N-(1-hydroxymethyl)propylmethacrylamide in aqueous solutions2005

    • Author(s)
      Seto Y., Aoki T., Kunugi S.
    • Journal Title

      Colloid Polym.Sci. 283(10)

      Pages: 1137-1142

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Effect of the Polypeptide Binding on the Thermodynamic Stability of the Substrate Binding Domain of the DnaK Chaperone.2005

    • Author(s)
      Nakao S.
    • Journal Title

      Biochimica et Biophysica Acta-Proteins and Proteomics- 1748

      Pages: 1-8

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Pressure-Temperature-Induced Denaturation of Yeast Phosphoglycerate Kinase, a Double-domain Protein.2004

    • Author(s)
      Tanaka T.
    • Journal Title

      Cellular and Molecular Biology 50(4)

      Pages: 317-322

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Interaction of the N-terminal Domain of Escherichia coli Heat Shock Protein ClpB and Protein Aggregates duirng Chaperone Activity.2004

    • Author(s)
      Tanaka, N.
    • Journal Title

      Protein Science 13

      Pages: 3214-3221

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Differences in the Pressure and Temperature Transitions : Proteins and Polymer Gels

    • Author(s)
      Kunugi S.
    • Journal Title

      Brazilian Journal of Biology and Medicine (in press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Temperature- and Pressure-responsive Properties of L- and DL- forms of Poly(N-(1-hydroxymethyl) propylmethacrylamide in Aqueous Solutions.

    • Author(s)
      Seto Y.
    • Journal Title

      Colloid & Polymer Science (in press)

    • Related Report
      2004 Annual Research Report
  • [Publications] Seto Y.: "High pressure studies on the coacervation of copoly(N-vinylformamide-vinylacetate) and copoly(N-vinylactylamide-vinylacetate)"Colloid Polym.Sci.. 281. 690-694 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kunugi S.: "Pressure-driven Cold Denauration of Proteins and Structure Formation of Water-Soluble Polymers"Advances in High Pressure Bioscience and Biotechnology. 2. 49-54 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamaoka T.: "Mechanism for the Phase Transition of a Genetically Engineered Elastin Model Peptide (VPGIG)40 in Aqueous Solution"Biomacromolecules. 4(6). 1680-1685 (2003)

    • Related Report
      2003 Annual Research Report

URL: 

Published: 2003-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi