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Systematic analysis of expression, function and origin of Dof transcription factors

Research Project

Project/Area Number 15370072
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Molecular biology
Research InstitutionThe University of Tokyo (2004-2005)
Okayama University (2003)

Principal Investigator

YANAGISAWA Shuichi  The University of Tokyo, Graduate School of Agricultural and Life Sciences, Associate Professor, 大学院・農学生命科学研究科, 助教授 (20222359)

Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥12,700,000 (Direct Cost: ¥12,700,000)
Fiscal Year 2005: ¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2004: ¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 2003: ¥6,300,000 (Direct Cost: ¥6,300,000)
KeywordsTranscription factor / Dof protein / Transcriptional regulation / Plant / Arabidopsis / Dof transcription factor
Research Abstract

Dof proteins are a group of transcription factors found only in plants. Although various physiological roles of Dof transcription factors have been suggested, roles of the majority of Dof transcription factors remain unknown. To fully understand the family of Dof transcription factors, we systematically analyzed the whole of Dof genes in Arabidopsis (a model plant). We investigated expression of all 36 Dof genes in Arabidopsis by RT-PCR. We found that most of AtDof genes are really expressed, whereas we hardly detected expression of six AtDof genes. The RT-PCR analysis with RNAs from various organs suggested organ-specific expression of several AtDof genes, although most of AtDof genes appeared to be ubiquitously and constitutively expressed. Unique expression patterns of three genes (AtDof2.3, AtDof2.4 and AtDof5.8 ) were further characterized with β-glucuronidase reporter gene in transgenic Arabidopsis plants. The analysis revealed that AtDof5.8 is expressed in young leaves, flower b … More uds and embryos. The AtDof2.3 promoter activity was preferentially observed in roots, especially in central cylinder of the upper part of roots and columella root caps. The AtDof2.4 promoter activity localized to provascular cells in seedlings and embryos. The expression pattern of AtDof2.4 was similar to that of the ATHB-8 gene, which is a member of Class III homeodomain-leucine zipper genes involved in vascular development and determination of leaf polarity. To identify novel functions of Dof transcription factors, we also performed phenotypic analysis with Arabidopsis mutants with the T-DNA insertion or the Ac/Ds transposon. We analyzed 17 out of 36 AtDof genes and found that an insertion into either of two closely related genes (AtDof3.1 and AtDof5.8) caused a similar phenotypic alteration. The disruption of AtDof3. I or AtDof5.8 led to decreased sensitivity to sugars. In addition, we found that ectopic expression of AtDof2.4 caused curling of leaves, implying involvement of AtDof2.4 in determination of leaf polarity. Less

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (12 results)

All 2006 2005 2004 Other

All Journal Article (8 results) Book (3 results) Publications (1 results)

  • [Journal Article] Improved nitrogen assimilation and growth under low-nitrogen conditions by overexpression of the Dof1 franscription factor in plants2006

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      In Plant nutrition for food security, human health, and environmental protection (Li, C.J.et al.eds.).(Tsinghua University Press (Beijing))

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Systematic modification of metabolism with transcription factors (in Japanese)2006

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      in Plantmimetic, TNS Press (Tokyo)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Approach for generation of crops which can grow under nitrogen-limiting conditions (in Japanese)2005

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      Brain Techno News 105

      Pages: 37-41

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Dof domain proteins : Plant-specific transcription factors associated with diverse phenomena unique to plants.2004

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      Plant Cell Physiology 45

      Pages: 386-391

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Improved nitrogen assimilation using transcription factors2004

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      ISB News Report (September issue)

      Pages: 1-4

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 少ない窒素肥料で生育可能な作物の創出方法2004

    • Author(s)
      柳澤修一
    • Journal Title

      ブレインテクノニュース 105

      Pages: 37-41

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Dof domain proteins : Plant-specific transcription factors associated with diverse phenomena unique to plants2004

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      Plant Cell Physiology 45

      Pages: 386-391

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Journal Article] Improved nitrogen assimilation using transcription factors2004

    • Author(s)
      Shuichi Yanagisawa
    • Journal Title

      ISB News Report September issue

      Pages: 1-4

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary 2004 Annual Research Report
  • [Book] プラントミメティックスー植物に学ぶ、第2章 エネルギーと代謝、第31項 転写因子による代謝の一括制御2006

    • Author(s)
      柳澤修一
    • Total Pages
      5
    • Publisher
      エヌ・ティー・エス出版
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] Improved nitrogen assimilation and growth under low-nitrogen conditions by overexpression of the Dof1 transcription factor in plants, in Plant nutrition for food security, human health, and environmental protection (Li, C. J. et al. eds.).2005

    • Author(s)
      Shuichi Yanagisawa
    • Total Pages
      2
    • Publisher
      Tsinghua University Press, (Beijing).
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] Improved nitrogen assimilation and growth under low-ntrogen conditions by overexpression of the Dof1 transcription factor in plants, in Plant nutrition for food security, human health, and environmental protection (Li, C.J.et al.eds.).2005

    • Author(s)
      Shuichi Yanagisawa
    • Total Pages
      2
    • Publisher
      Tsinghua University Press, (Beijing).
    • Related Report
      2005 Annual Research Report
  • [Publications] Shuichi Yanagisawa: "Dof domain proteins : Plant-specific transcription factors associated with diverse phenomena unique to plants"Plant Cell Physiol.. (in press). (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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