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Studies on endoderm and emdodermal organ formation by analyzing zebrafish mutants.

Research Project

Project/Area Number 15370094
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Developmental biology
Research InstitutionNagoya University

Principal Investigator

KIKUCHI Yutaka  Nagoya University, Graduate School of Science, Associate Professor, 大学院理学研究科, 助教授 (20286438)

Project Period (FY) 2003 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥11,900,000 (Direct Cost: ¥11,900,000)
Fiscal Year 2006: ¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2005: ¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2004: ¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2003: ¥3,700,000 (Direct Cost: ¥3,700,000)
Keywordszebrafish / endoderm / mutant / organogenesis / Pou2 / Notch
Research Abstract

Gastrulating vertebrate embryos generate the three germ layers, known as ectoderm, mesoderm and endoderm during early development. The induction and differentiation of endodermal cells and the formation of organs derived from the gut tube have been poorly analyzed in comparison to ectoderm or mesoderm. However, in the past few years, zebrafish mutants and knockout mice which have disrupted endoderm formation, and the molecular functions of Xenopus genes involved in endoderm formation, have been extensively analyzed. As a result of these studies, our understanding of endoderm development is now fairly advanced in early vertebrate embryos. In particular, these genetic and molecular biological approaches have led to a more detailed understanding of the molecular regulation of the endoderm.
In spite of these efforts, however, many mechanisms, such as the fate choice of endodermal cells, the migration of endodermal cells during gastrulation and the regional specification of the endoderm along the anterior-posterior axis, which are essential to fully understand its differentiation, are not well understood. To elucidate the molecular mechanisms of endoderm and endodermal organ formation, I planned to search the new zebrafish mutants, which show the defects in endoderm formation. We have already screened 130 fish pairs (260 genomes) and succeeded to find the three new mutants. The two mutants (legato and morendo) show defects in the intestinal epithelium formation. The other mutant (decrescendo) shows the defects in endodermal organ formation. We are analyzing the phenotype of these mutants and trying to find the mutated genes.

Report

(5 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (20 results)

All 2007 2006 2005 2004 Other

All Journal Article (18 results) Publications (2 results)

  • [Journal Article] Initial specification of the epibranchial placode in zebrafish embryos depends on the fibroblast growth factor signal.2007

    • Author(s)
      Nikaido, M.
    • Journal Title

      Developmental Dynamics 236

      Pages: 564-571

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Initial specification of the epibranchial placode in zebrafish embryos depends on the fibroblast growth factor signal.2007

    • Author(s)
      Nikaido, M., Doi, K., Shimizu, T., Hibi, M., Kikuchi.Y., Yamasu, K.
    • Journal Title

      Developmental Dynamics 236

      Pages: 564-571

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Initial specification of the epibranchial placode in zebrafish embryos depends on the fibroblast growth factor signal.2007

    • Author(s)
      Nikaido, M., Doi, K., Shimizu, T., Hibi, M., Kikuchi, Y., Yamasu, K.
    • Journal Title

      Developmental Dynamics 236

      Pages: 564-571

    • Related Report
      2006 Annual Research Report
  • [Journal Article] The yolk syncytial layer regulates myocardial migration by influencing extracellular matrix assembly in zebrafish.2006

    • Author(s)
      Sakaguchi, T.
    • Journal Title

      Development 133

      Pages: 4063-4072

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fgf signaling negatively regulates Nodal-dependent endoderm induction in zebrafish.2006

    • Author(s)
      Mizoguchi, T.
    • Journal Title

      Developmental Biology 300

      Pages: 612-622

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The yolk syncytial layer regulates myocardial migration by influencing extracellular matrix assembly in zebrafish.2006

    • Author(s)
      Sakaguchi, T., Kikuchi.Y., Kuroiwa, A., Takeda, H., Stainier, D.Y.R.
    • Journal Title

      Development 133

      Pages: 4063-4072

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fgf signaling negatively regulates Nodal-dependent endoderm induction in zebrafish.2006

    • Author(s)
      Mizoguchi, T., Izawa, T., Kuroiwa, A., Kikuchi.Y.
    • Journal Title

      Developmental Biology 300

      Pages: 612-622

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Fgf signaling negatively regulates Nodal-dependent endoderm induction in zebrafish.2006

    • Author(s)
      Mizoguchi, T., Izawa, T., Kuroiwa A, Kikuchi.Y.
    • Journal Title

      Developmental Biology 300

      Pages: 612-622

    • Related Report
      2006 Annual Research Report
  • [Journal Article] The yolk syncytial layer regulates myocardial migration by influencing extracellular matrix assembly in zebrafish.2006

    • Author(s)
      Sakaguchi, T., Kikuchi, Y., Kuroiwa, A., Takeda, H, Stainier, D.Y.R.
    • Journal Title

      Development 133

      Pages: 4063-4072

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Eomesodermin is a localized maternal determinant required for endoderm induction in zebrafish.2005

    • Author(s)
      Bjornson, C.R.R.
    • Journal Title

      Developmental Cell 9

      Pages: 523-533

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Eomesodermin is a localized maternal determinant required for endoderm induction in zebrafish.2005

    • Author(s)
      Bjornson, C.R.R., Griffin, K.J.P., Farr III, G.H., Terashima, A., Himeda, C., Kikuchi.Y., Kimelman, D.
    • Journal Title

      Developmental Cell 9

      Pages: 523-533

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Eomesodermin is a localized maternal determinant required for endoderm induction in zebrafish.2005

    • Author(s)
      Bjornson, C.R.R., Griffin, K.J.P., Farr III, G.H., Terashima, A., Himeda, C., Kikuchi, Y., Kimelman, D.
    • Journal Title

      Developmental Cell 9

      Pages: 523-533

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Endoderm development in vertebrates : fate mapping, induction and regional specification.2005

    • Author(s)
      Fukuda, K., Kikuchi Y.
    • Journal Title

      Development Growth Differentiation 47

      Pages: 343-355

    • NAID

      40006844076

    • Related Report
      2005 Annual Research Report
  • [Journal Article] The POU domain protein spg (Pou2/Oct4) is essential for endoderm formation in cooperation with the HMG domain protein Casanova.2004

    • Author(s)
      Reim, G.
    • Journal Title

      Developmental Cell 6

      Pages: 91-101

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Notch signaling can regulate endoderm formation in zebrafish.2004

    • Author(s)
      Kikuchi Y.
    • Journal Title

      Developmental Dynamics 229

      Pages: 756-762

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] The POU domain protein spg (Pou2/Oct4) is essential for endoderm formation in cooperation with the HMG domain protein Casanova.2004

    • Author(s)
      Reim, G., Mizoguchi, T., Stainier, D.Y.R., Kikuchi.Y., Brand, M.
    • Journal Title

      Developmental Cell 6

      Pages: 91-101

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Notch signaling can regulate endoderm formation in zebrafish.2004

    • Author(s)
      Kikuchi.Y., Verkade, H., Reiter, J.F., Kim, C.-H., Chitnis, A.B., Kuroiwa, A., Stainier, D.Y.R.
    • Journal Title

      Developmental Dynamics 229

      Pages: 756-762

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Notch signaling can regulate endoderm formation in zebrafish2004

    • Author(s)
      Kikuchi, Y., Verkade, H., Reiter, J.F., Kim, C.-H., et al.
    • Journal Title

      Developmental Dynamics 229

      Pages: 756-762

    • Related Report
      2004 Annual Research Report
  • [Publications] Reim, G., Mizoguchi, T., Stainier, D.Y., Kikuchi.Y., Brand.M.: "The POU domain protein Spg (Pou2/Oct4) is essential for endoderm formation in cooperation with the HMG domain protein Casanova"Developmental Cell. 6. 91-101 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kikuchi, Y., Verkade, H., Reiter, J.F., Kim.C.-H., et al.: "Notch signaling can regulate endoderm formation in zebrafish"Developmental Dynamics. (in press).

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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