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Functional analyses of terpene-related biosynthetic enzymes and creaion of novel cyclases

Research Project

Project/Area Number 15380081
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Bioproduction chemistry/Bioorganic chemistry
Research InstitutionNiigata University

Principal Investigator

HOSHINO Tsutomu  Niigata University, Institute of Science and Technology, Professor, 自然科学系, 教授 (30165542)

Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥11,300,000 (Direct Cost: ¥11,300,000)
Fiscal Year 2005: ¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 2004: ¥2,200,000 (Direct Cost: ¥2,200,000)
Fiscal Year 2003: ¥6,900,000 (Direct Cost: ¥6,900,000)
Keywordssqualene / triterpene / biosynthesis / Mycobacterium tuberculosis / diterpene / unnatural amino acid / squalene / Mycobacterium tuerculosis / diterpene / halimane / hopene / cation / π-interaction / sesquiterpne / dorimane / terpenoids / alteration of terpene cyclase / site-directed mutagenesis / genetic code / incorporation of unnatural amino acid / Mycobacterium tuberculosin / substrate specificity / Alicyclobacillus acidocaldarius / ラノステロール / ホペン / スクアレン合成酵素
Research Abstract

This project was to elucidate the function of squalene-hopene cyclase and terpene-related biosynthetic enzymes and to create a novel terpene cyclase.
1.SHC (squalene-hopene cyclase)
(1)final deprotonation occurs from the terminal (Z)-Me and highly polarized water acted to abstract the proton.
(2)Squalene analogs having a methyl group at different positions were synthesized in order to know how the methyl group on squalene affects the polycyclization. Introduction of Me group at 7- or 11-position resulted in no reaction.
(3)SHC can accept truncated analogs having C15,C20 and C25, giving sesqui, di- and sesterterpenes.
(4)We first succeeded in alteration of substrate specificity. Deletion of Gly600 alters the substrate specificity into eukaryotic type cyclase specific to (3S)-2,3-oxidosqualene.
(5)Protocol of the site-specific incorporation of unnatural amino acid was developed by us. Incorporation of fluorophenylalanines at positions 605 and 365 established that cation-π interaction play a critical role for the cyclization cascade.
2.Diterpene synthase from Mycobacterium tuberculosis
(1)Rv3377c was cloned in E.coli. With aid of chaperon, this gene product was functionally expressed and determined to be diterpene cyclase after incubating various substrates. This product has halimane skeleton and was named tuberculosinol.
(2)It turned out that Rv3378c was responsible for dephosphorylating tuberculosinol-pp.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (23 results)

All 2005 2004 Other

All Journal Article (21 results) Publications (2 results)

  • [Journal Article] Enzymatic cyclizations of squalene analogs with threo- and erythro-diols at the 6,7- and 10,11-positions by recombinat squalene cyclase. Trapping of carbocation intermediates and mechanistic insights into the product and substrate specificities.2005

    • Author(s)
      T.Abe, T.Hoshino
    • Journal Title

      Org.Biomol.Chem. 3

      Pages: 3127-3139

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Mycobacterium tuberculosis H37Rv3377c encodes the diterpene cyclase for producing the halimane skeleton2005

    • Author(s)
      C.Nakano
    • Journal Title

      Chem.Commun. 4

      Pages: 1016-1018

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Enzymatic cyclizations of squalene analogs with threo- and erythro-diols at the 6,7-and 10,11-positions by recombinat squalene cyclase. Trapping of carbocation intermediates and mechanistic insights into the product and substrate specificities.2005

    • Author(s)
      T.Abe, T.Hoshino
    • Journal Title

      Org.Biomol.Chem. 3

      Pages: 3127-3139

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mycobacterium tuberculosis H37Rv3377c encodes the diterpene cyclase for producing the halimane skeleton2005

    • Author(s)
      Chiaki Nakano, Tomoo Okamura, Tsutomu Sato, Tohru Dairi, Tsutomu Hoshino
    • Journal Title

      Chem.Commun. 4

      Pages: 1016-1018

    • NAID

      120006745822

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Mycobacterium tuberculosis H37Rv3377c encodes the diterpene cyclase for producing the halimane skeleton2005

    • Author(s)
      C.Nakano et al.(計5名)
    • Journal Title

      Chem.Commun. 4

      Pages: 1016-1018

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Mycobacterium tuberculosis H37Rv 3377c encodes the diterpene cyclase for producing halimane skeleton2005

    • Author(s)
      Nakano, C.
    • Journal Title

      Chem.Commun. Issue 5

      Pages: 1016-1018

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Enzymatic cyclization reactions of geraniol, farnesol and geranylgeraniol, and those of truncated squalene analogs having C20 and C25 by recombinant squalene cyclase2004

    • Author(s)
      T.Hoshino
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 2650-2657

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Deletion of the Gly600 residue of Alicyclobacillus acidocaldarius squalene cyclase alters the substrate specificity into that ofeukaryotic type cyclase specific to (3S)-2,3-oxidosqualene2004

    • Author(s)
      T.Hoshino
    • Journal Title

      Angew.Chem.Int.Ed. 43

      Pages: 6700-6703

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Squalene-hopene cyclase : insight into the role of the methyl group on the squalene backbone upon the polycyclization cascade. Enzymatic cyclization products of squalene aalogs lacking a 26-methyl group and possessing a methyl group at C(7) or C(11)2004

    • Author(s)
      S.Nakano
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 2012-2022

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Site-directed mutagenesis experiments on the putative deprotonation site of squalene-hopene cyclase from Alicyclobacillus acidocaldarius2004

    • Author(s)
      T.Sato
    • Journal Title

      Biosci.Biotechnol.Biochem. 68

      Pages: 728-738

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Squalene-hopene Cyclase : Final Deprotonation Reaction, Conformational Analysis for the Cyclization of 3(R,S)-2,3-Oxidosqualene and Further Evidence for the requirement of isopropylidene moiety for initiating the polycyclization reaction2004

    • Author(s)
      Tsutomu Hoshino
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 1456-1470

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Enzymatic cyclization reactions of geraniol, farnesol and geranylgeraniol, and those of truncated squalene analogs having C20 and C25 by recombinant squalene cyclase2004

    • Author(s)
      Tsutomu Hoshino, Yuko Kumai, Isao Kudo, Shin-ichi Nakano, Shumi Ohashi
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 2650-2657

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Deletion of the Gly600 residue of Alicyclobacillus acidocaldarius squalene cyclase alters the substrate specificity into that ofeukaryotic type cyclase specific to (3S)-2,3-oxidosqualene.2004

    • Author(s)
      Tsutomu Hoshino, Kunio Shimizu, Tsutomu Sato
    • Journal Title

      Angew.Chem.Int.Ed. 43

      Pages: 6700-6703

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Squalene-hopene cyclase : insight into the role of the methyl group on the squalene backbone upon the polycyclization cascade. Enzymatic cyclization products of squalene aalogs lacking a 26-methyl group and possessing a methyl group at C(7) or C(11)2004

    • Author(s)
      Shin-ichi Nakano, Shumi Ohashi, Tsutomu Hoshino
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 2012-2022

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Site-directed mutagenesis experiments on the putative deprotonation site of squalene-hopene cyclase from Alicyclobacillus acidocaldarius2004

    • Author(s)
      Tsutomu Sato, Masanori Koda, Tsutomu Hoshino
    • Journal Title

      Biosci.Biotechnol.Biochem 68

      Pages: 728-738

    • NAID

      10013143371

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Squalene-hopene Cyclase : Final Deprotonation Reaction, Conformational Analysis for the Cyclization of 3(R,S)-2,3-Oxidosqualene and Further Evidence for the requirement of isopropylidene moiety for initiating the polycyclization reaction.2004

    • Author(s)
      Tsutomu Hoshino, Schin-ichi Nakano, Tomohiro Kondo, Tsutomu Sato, Aya Miyoshi
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 1456-1470

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Site-directed mutagenesis experiments on the putative deprotonation site of squalene-hopene cyclase from Alicyclobacillus acidocaldarius2004

    • Author(s)
      Sato, T. et al.
    • Journal Title

      Biosci.Biotechnol.Biochem. 68

      Pages: 728-738

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Squalene-hopene Cyclase : Final Deprotonation Reaction, conformational Analysis for the Cyclization of 3(R, S)-2,3-Oxidosqualene and Further Evidence for the requirement of isopropylidene moiety for initiating the polycyclization reaction.2004

    • Author(s)
      Hoshino, T. et al.
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 1456-1470

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Squalene-hopene cyclase : insight into the role of the methyl group on the squalene backbone upon the polycyclization cascade. Enzymatic cyclization products of squalene aalogs lacking a 26-methyl group and possessing a methyl group at C(7) or C(11)2004

    • Author(s)
      Nakano, S. et al.
    • Journal Title

      Org.Biomol.Chem. 2

      Pages: 2012-2022

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Enzymatic cyclization reactions of geraniol, famesol and geranylgeraniol, and those of truncated squalene analogs having C20 and C25 by recombinant squalene cyclase2004

    • Author(s)
      Hoshino, T.
    • Journal Title

      Org.Biomol.Chem. 3

      Pages: 2650-2657

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Deletion of the Gly600 residue of Alicyclobacillus acidocaldarius squalene cyclase alters the substrate specificity into that ofeukaryotic type cyclase specific to (3S)-2,3-oxidosqualene.2004

    • Author(s)
      Hoshino, T.
    • Journal Title

      Angew.Chem.Int.Ed. 43

      Pages: 6700-6703

    • Related Report
      2004 Annual Research Report
  • [Publications] T.Sato: "Site-directed mutagenesis experiments on the putative deprotonation site of squalene-hopene cyclase from Alicyclobacillus acidocaldarius"Biosci.Biotechnol.Biochem.. 68/3(印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 星野 力: "生物有機化学"三共出版. 236 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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