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Studies on primary structures and genes of cellulases from marine invertebrates

Research Project

Project/Area Number 15380138
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Fisheries chemistry
Research InstitutionHOKKAIDO UNIVERSITY

Principal Investigator

OJIMA Takao  Hokkaido University, Faculty of Fisheries Sciences, Professor, 大学院・水産科学研究院, 教授 (30160865)

Co-Investigator(Kenkyū-buntansha) KISHIMURA Hideki  Hokkaido University, Faculty of Fisheries Sciences, Associate Professor, 大学院・水産科学研究院, 助教授 (50204855)
TANAKA Hiroyuki  Hokkaido University, Faculty of Fisheries Sciences, Instructor, 大学院・水産科学研究院, 助手 (90241372)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥6,100,000 (Direct Cost: ¥6,100,000)
Fiscal Year 2005: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 2004: ¥1,100,000 (Direct Cost: ¥1,100,000)
Fiscal Year 2003: ¥3,300,000 (Direct Cost: ¥3,300,000)
Keywordscellulase / marine invertebrates / primary structure / gene / cDNA cloning / abalone / scallop / sea urchin / 水産生物 / 無脊椎動物 / キタムラサキウニ / セルロース
Research Abstract

Distribution of cellulases in marine invertebrates was investigated by measuring the cellulase activity (CMCase activity) of digestive fluids from various invertebrates. Accordingly, herbivorous invertebrates such as abalone, sea urchin, and scallop were found to possess cellulases, whereas carnivorous invertebrates like starfish and Neptune snail were considered to possess no cellulases. Subsequently, cellulases (endo-1,4-β-glucanases) were isolated from abalone, sea urchin, and scallop by conventional column chromatographies and their cDNA and structural genes were cloned to deduce their primary structure. According to the deduced structures, the abalone, sea urchin, and scallop enzymes were classified to glycoside hydrolase family 9 (GHF9) as in case of termite and crayfish cellulases previously reported. Phylogenetic analysis of cellulase genes indicated that abalone, sea urchin, and scallop cellulases were derived from a common ancestral gene along with arthropod enzymes. In the abalone digestive fluid, an isozyme possessing a family-II carbohydrate-binding module in the N-terminus was found. This enzyme is the first animal cellulase possessing the family-II CBM in the N-terminus of the GHF9-type catalytic domain. Degrading abilities of the invertebrate cellulases toward cello-oligosaccharides were investigated. The abalone cellulase could degrade trisaccharide to disaccharide and glucose ; however, the sea urchin and scallop enzymes could not. Thus smallest substrate was trisaccharide for the abalone enzyme but tetrasaccharide for sea urchin and scallop enzymes. Further, when tetrasaccharide was allowed to react, the abalone enzyme split it into two moles of disaccharide, while the sea urchin and scallop enzymes split into trisaccharide and glucose as well as 2 moles of disaccharide. Therefore, the catalytic mechanism of invertebrate cellulases was considered to vary depending on the animal species although the enzymes all belong to GHF9.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (15 results)

All 2006 2005 2004 2003 Other

All Journal Article (14 results) Publications (1 results)

  • [Journal Article] Isolation and cloning of an endo-β-1, 4-mannanase from the pacific abalone Haliotis discus hannai.2006

    • Author(s)
      S.Ootsuka, N.Saga, K.Suzuki, A.Inoue, T.Ojima
    • Journal Title

      J. Biotech. (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel oligoalginate lyase from abalone, Haliotis discus hannai, that releases disaccharide from alginate polymer in an exolytic manner2006

    • Author(s)
      H.Suzuki, K.Suzuki, A.Inoue, T.Ojima
    • Journal Title

      Carbohydr. Res. (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Isolation and cloning of an endo-β-1,4-mannanase from the pacific abalone Haliotis discus hannai.2006

    • Author(s)
      S.Ootsuka, N.Saga, K.Suzuki, A.Inoue, T.Ojima.
    • Journal Title

      J.Biotech. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A novel oligoalginate lyase from abalone, Haliotis discus hannai, that releases disaccharide from alginate polymer in an exolytic manner.2006

    • Author(s)
      H.Suzuki, K.Suzuki, A.Inoue, T.Ojima.
    • Journal Title

      Carbohydr.Res. (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Isolation and cloning of an endo-β-1,4-Mannanase from Pacific Abalone Haliotis discus hannai2006

    • Author(s)
      S.Ootsuka, N.Saga, K.Suzuki, A.Inoue, T.Ojima
    • Journal Title

      J.Biotech. (In press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Functional importance of Ca2+-deficient N-terminal lobe of molluscan troponin C in troponin regulation.2005

    • Author(s)
      T.Doi, A.Satoh, H.Tanaka, A.Inoue, F.Yumoto, M.Tanokura, I.Ohtsuki, K.Nishita, T.Ojima
    • Journal Title

      Arch.Biochem.Biophys. 436

      Pages: 83-90

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Comparative studies on the functional roles of N- and C-terminal regions of molluskan and vertebrate troponin-I.2005

    • Author(s)
      H.Tanaka, Y.Takeya, T.Doi, F.Yumoto, M.Tanokura, I.Ohtsuki, K.Nishita, T.Ojima
    • Journal Title

      FEBS J. 272

      Pages: 4475-4486

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Structural characteristics of a cellulase from the pacific abalone Haliotis discus hannai.2004

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita
    • Journal Title

      Mar. Biotechnol. 6

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A GHF 9 cellulase gene from abalone Haliotis discus hannai.2004

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita.
    • Journal Title

      Biotechnology of lignocellulose degradation and biomass utilization

      Pages: 407-411

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Structural characteristics of a cellulase from the Pacific Abalone Haliotis discus hannai.2004

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita.
    • Journal Title

      Mar.Biotech. 6

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A GHF 9 cellulase gene from abalone Haliotis discus hannai.2004

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita.
    • Journal Title

      Biotechnology of Lignocellulose Degradation and Biomass Utilization

      Pages: 407-411

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Structural Characteristics of Cellulase from Pacific Abalone(Haliotis discus hannai)2004

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita
    • Journal Title

      Marine Biotechnology(Special Proceedings Issue) SPI

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Purification and cDNA cloning of a cellulase from abalone Haliotis discus hannai.2003

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita
    • Journal Title

      Eur. J. Biochem. 270

      Pages: 771-778

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Purification and cDNA Cloning of a cellulase from abalone Haliotis discus hannai.2003

    • Author(s)
      K.Suzuki, T.Ojima, K.Nishita.
    • Journal Title

      Eur.J.Biochem. 270

      Pages: 771-778

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] K.Suzuki, T.Ojima, K.Nishita: "Purification and cDNA Cloning of a cellulase from abalone Haliotis discus hannai"Eur.J.Biochem.. 270. 771-778 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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