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Studies on genetic structure of the beech forest and its conservation in the World Natural Heritage at Shirakami-sanchi

Research Project

Project/Area Number 15380219
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Boundary agriculture
Research InstitutionHirosaki University

Principal Investigator

MAKITA Hajime  Hirosaki University, Faculty of Agriculture and Life Sciences, Visiting Scientist (80004464)

Co-Investigator(Kenkyū-buntansha) NIIZEKI Minoru  Hirosaki University, Faculty of Agriculture and Life Sciences, Professor (40001490)
HARADA Takeo  Hirosaki University, Faculty of Agriculture and Life Sciences, Professor (10228645)
AKADA Shinji  Hirosaki University, Gene Research Center, Associate Professor (10250630)
ISHIKAWA Ryuji  Hirosaki University, Faculty of Agriculture and Life Sciences, Associate Professor (90202978)
SENDA Mineo  Hirosaki University, Faculty of Agriculture and Life Sciences, Associate Professor (30261457)
Project Period (FY) 2003 – 2006
Project Status Completed (Fiscal Year 2006)
Budget Amount *help
¥15,800,000 (Direct Cost: ¥15,800,000)
Fiscal Year 2006: ¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 2005: ¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 2004: ¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 2003: ¥4,100,000 (Direct Cost: ¥4,100,000)
KeywordsShirakami-sanchi, the World Natural Heritage / Beech(Fagus crenata Blurae) / Genetic diversity / SSR marker / MYB / Environmentally responsive genes / Self-incompatibility / IGS / 環境適応遺伝子 / R2R3MYB / 遺伝子マーカー / 毎木調査 / 親子関係 / 遺伝的距離 / rDNA-IGS / SSR / DNAマーカー / ブナ / AFLP / ITS
Research Abstract

Beech forest is well conserved in a vast area of Shirakami-sanchi and the central part (1, 697 ha) of this area has been designated as the World Natural Heritage since 1993. In order to gain insights into how these forests would fare in the future when the global and the local climate changes might come forward, it is important to investigate intensively the genetic structure of the beech forest as well as the genetic capacity of the individual trees to cope with environmental changes. The achievements of this program have been summarized into the following 3 items.
1. Different types of DNA markers, such as SSR markers through molecular analysis of MYB family and the fragmented copies of IGS region, allowing detection of differences in individual genetic components, have been developed. In an attempt to develop some maternally inherited DNA markers, the beech chloroplast and mitochondrial DNA has been cloned and sequenced.
2. We established a plot for the inventory study in the area of … More about 1.65 ha at Mt. Takakuramori, which is localized in the buffering area of the World Heritage, and analyzed the genetic markers of all the adult trees and saplings to investigate the genetic diversity of the forest as well as parentage of the saplings. We have also investigated the beech forest at the central area of the World Heritage, at Mt. Takakuma Kagoshima prefecture, and at Ogawa site Ibaraki prefecture, to find out the genetic distances of these forests and to carry out the comparative analysis of their genetic diversities.
3. In order to analyze the genetic capacity of individual beech trees, we investigated the cause for the beechnuts ending up empty, and found that there is a strong requirement for cross-pollination and self-incompatibility may be responsible for this. Furthermore, in order to identify some genes responsible for environmental adaptation and to investigate the genetic diversity of these genes, we analyzed the beech MYB gene family and identified, so far, 85 independent genes. Among these genes, we found out some genes responsive to various environmental stresses, such as, cold, high temperature, drought and also some genes whose expression fluctuates extensively depending on the seasons. Less

Report

(5 results)
  • 2006 Annual Research Report   Final Research Report Summary
  • 2005 Annual Research Report
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (20 results)

All 2007 2006 2005 2004 2003

All Journal Article (20 results)

  • [Journal Article] ブナ原生林の遺伝子多様性とその保全2007

    • Author(s)
      赤田 辰治, 松田 修一, 牧田 肇
    • Journal Title

      生物の科学遺伝 61・5

      Pages: 43-47

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] ブナの実の"しいな"は何故できるか2007

    • Author(s)
      赤田 辰治, 青木 強
    • Journal Title

      白神研究 4

      Pages: 35-39

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Geneticdiversity of the natural forest of beech and itsconservation.2007

    • Author(s)
      Akada, S. S. Matsuda, H. Makita.
    • Journal Title

      Life science ; Heredity 61(5)

      Pages: 43-47

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] What is the cause for the beech nuts ending up empty.2007

    • Author(s)
      Akada, S. T. Aoki
    • Journal Title

      Shirakami kenkyu 4

      Pages: 35-39

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 高倉森ブナ林における毎木調査と親子関係の推定2006

    • Author(s)
      赤田 辰治, 鈴木 裕貴, 千田 峰生, 石川 隆二, 原田 竹雄, 新関 稔, 牧田 肇
    • Journal Title

      白神研究 3

      Pages: 32-36

    • NAID

      110004656159

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] An inventory study and parentage analysis of a beech(Fagus crenata Blume) forest on Mt. Takakuramori.2006

    • Author(s)
      Akada, S. H. Suzuki, M. Senda, R. Ishikawa, T. Harada, M. Niizeki, H. Makita.
    • Journal Title

      Shirakami kenkyu 3

      Pages: 32-36

    • NAID

      110004656159

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 高倉森ブナ林における毎木調査と親子関係の推定2006

    • Author(s)
      赤田辰治, 鈴木裕貴, 千田峰生, 石川隆二, 原田竹雄, 新関稔, 牧田肇
    • Journal Title

      白神研究 3

      Pages: 32-36

    • NAID

      110004656159

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Isolation and characteristics of Methanosaeta in paddy field soils.2006

    • Author(s)
      Mizukami, S., K.Takeda, S.Akada, T.Fujita
    • Journal Title

      Biosci Biotechnol Biochem 70

      Pages: 828-835

    • NAID

      10018532073

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Characteristics of an anaerobic, syntrophic, butyrate-degrading bacterium in paddy field soil.2006

    • Author(s)
      Zou B.-Z., K.Takeda, A.Tonouchi, S.Akada, T.Fujita
    • Journal Title

      Biosci Biotechnol Biochem 67

      Pages: 2059-2067

    • NAID

      110002698743

    • Related Report
      2006 Annual Research Report
  • [Journal Article] Low expression of an endopolygalacturanase gene in apple fruit with long-term storage potential.2006

    • Author(s)
      Wakasa, Y., Kudo, H., Ishikawa, R., Akada, S., Senda, M., Niizeki, M., Harada, T.
    • Journal Title

      Postharvest biology and technology 39

      Pages: 193-198

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Molecular linkage mapping and phylogeny of the chalcone synthase multigene family in soybean.2005

    • Author(s)
      Matsumura, M., S.Watanabe, K.Harada, M.Senda, S.Akada, S.Kawasaki, E.G.Dubouzet, N.Minaka, R.Takahashi
    • Journal Title

      Theor Appl Genet 110

      Pages: 1203-1209

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 「暗門山水観」の木流し2005

    • Author(s)
      工藤光治, 牧田肇
    • Journal Title

      白神研究 2

      Pages: 2-5

    • NAID

      110002336183

    • Related Report
      2005 Annual Research Report
  • [Journal Article] R2R3-MYB transcription factors from Lotus corniculatus var.japonicus differentially regulated in roots and shoots in response to nitrogen starvation2004

    • Author(s)
      Miyake, K., T.Ito, M.Senda, R.Ishikawa, T.Harada, M.Niizeki and S.Akada
    • Journal Title

      Lotus Newsletter 34

      Pages: 54-59

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 白神山地におけるブナの個体識別DNAマーカーの開発2004

    • Author(s)
      赤田 辰治, 佐藤 美奈子, 若松 直子, 千田 峰生, 石川 隆二, 原田 竹雄, 新関 稔, 牧田 肇
    • Journal Title

      白神研究 1

      Pages: 42-47

    • NAID

      110002555920

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] R2R3-MYB transcription factors from Lotus corniculatus var. japonicus differentially regulated in roots and shoots in response to nitrogen starvation2004

    • Author(s)
      Miyake, K. T. Ito, M. Senda, R. Ishikawa, T. Harada, M. Niizeki, S. Akada.
    • Journal Title

      Lotus Newsletter 34

      Pages: 54-59

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Development of DNA markers distinguishing individuals of beech(Fagus crenata Blume) in Shirakami Mountains.2004

    • Author(s)
      Akada, S. M. Sato, N. Wakamatsu, M. Senda, R. Ishikawa, T. Harada, M. Niizeki, H. Makita.
    • Journal Title

      Shirakami kenkyu 1

      Pages: 35-39

    • NAID

      110002555920

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] 白神山地におけるブナの個体識別DNAマーカーの開発2004

    • Author(s)
      赤田 辰治
    • Journal Title

      白神研究 1号

      Pages: 42-47

    • NAID

      110002555920

    • Related Report
      2004 Annual Research Report
  • [Journal Article] R2R3-MYB transcription factors from Lotus corniculatus var. japonicus diffeentially regulated in roots and shoots in response to nitrogen starvation.2004

    • Author(s)
      Miyake, Kunihiko et al.
    • Journal Title

      Lotus Newsletter 34号

      Pages: 54-59

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Isolation of a subfamily of genes for R2R3-MYB transcription factors showing up-regulated expression under nitrogen nutrient-limited conditions2003

    • Author(s)
      Miyake, K., T.Ito, M.Senda, R.Ishikawa, T.Harada, M.Niizeki and S.Akada
    • Journal Title

      Plant Mol.Biol 53

      Pages: 237-245

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2006 Final Research Report Summary
  • [Journal Article] Isolation of a subfamily of genes for R2R3-MYB transcription factors showing up-regulated expression under nitrogen nutrient-limited conditions.2003

    • Author(s)
      Miyake, K. T. Ito, M. Senda, R. Ishikawa, T. Harada, M. Niizeki, S. Akada.
    • Journal Title

      Plant Mol. Biol 53

      Pages: 237-245

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2006 Final Research Report Summary

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Published: 2003-04-01   Modified: 2016-04-21  

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