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Identification of hepatic genes regulated in early phase of cholestasis by cDNA microarray analysis in rats

Research Project

Project/Area Number 15390044
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Medical pharmacy
Research InstitutionChiba University

Principal Investigator

CHIBA Kan  Chiba University, Graduate School of Pharmaceutical Sciences, Professor, 大学院・薬学研究院, 教授 (40159033)

Co-Investigator(Kenkyū-buntansha) HOSOKAWA Masakiyo  Chiba University, Graduate School of Pharmaceutical Sciences, Associate Professor, 大学院・薬学研究院, 助教授 (70181500)
KOBAYASHI Kaoru  Chiba University, Graduate School of Pharmaceutical Sciences, Associate Professor, 大学院・薬学研究院, 助教授 (30255864)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥9,800,000 (Direct Cost: ¥9,800,000)
Fiscal Year 2005: ¥3,000,000 (Direct Cost: ¥3,000,000)
Fiscal Year 2004: ¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2003: ¥3,500,000 (Direct Cost: ¥3,500,000)
Keywordsmicroarray / cholestasis / gene expression / cluster analysis / cDNAマイクロアレイ / OAT3 / PXR / CAR / SHP / TNFα
Research Abstract

Cholestasis is one of the major liver diseases and results in the progressive liver fibrosis and cirrhosis. Identification of genes altered in the early phase of cholestasis is essential to understand the molecular mechanisms of the progression of cholestasis. In this study, we examined the temporal patterns of transcriptional response of the liver to established rodent models of cholestasis (common bile duct ligation and α-naphtylisothioeyanate intoxication models) by cDNA microarray analysis to identify genes specifically regulated in cholestasis regardless of the stimulating treatment. By clustering analysis of multiple time-point data, we identified 25 genes showing similar transcriptional responses to both of the treatments in the early phase of cholestasis. These genes included a small heterodimer partner and its target genes that have been regarded as genes involved in mechanisms of cell protection against accumulated toxic bile acids. The genes identified also included genes involved in apoptosis and tissue regeneration that may be related to the mechanisms of cytoprotection against and to repair events of cell injury. The identified genes also included genes involved in the synthesis and secretion of bicarbonate and glutathione, and down-regulation of these genes may explain decreased bile flow in cholestasis. In conclusion, we identified 25 genes specifically regulated in the early phase of chloestasis by cDNA microarray analysis. Microarray analysis of multiple models of cholestasis coupled with clustering analysis of multiple time-point data appears to be a useful approach for identifying genes and their molecular pathways that universally exist in the early phase of cholestasis.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (8 results)

All 2005 Other

All Journal Article (7 results) Publications (1 results)

  • [Journal Article] Gene expression profiling of cathepsin D, metallothioneins-1 and -2, osteopontin, and tenascin-C in a mouse spinal cord injury model by cDNA microarray analysis.2005

    • Author(s)
      Hashimoto M et al.
    • Journal Title

      Acta Neuropathol 109

      Pages: 165-180

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Association of increased type I collagen expression and relative stromal overgrowth in mouse epididymis neonatally exposed to diethylstilbestrol2005

    • Author(s)
      Yamazaki et al.
    • Journal Title

      Mol Reprod Dev. 72

      Pages: 291-8

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Gene expression pro filing of cathepsin D.metallothioneins-1 and -2. osteopontin. and tenascin-C in a mouse spinal cord injury model by cDNA microarray analysis.2005

    • Author(s)
      Hashimoto M et al.
    • Journal Title

      Acta Neuropathol 109

      Pages: 165-180

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Association of increased type 1 collagen expression and relative stromal overgrowth in mouse epididymis neonatally exposed to diethylstilbestrol2005

    • Author(s)
      Yamazaki et al.
    • Journal Title

      Mol Reprod Dev. 72

      Pages: 291-298

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Gene expression profiling of cathepsin D, metallothioneins-1 and -2, osteopontin, and tenascin-C in a mouse spinal cord injury model by cDNA microarray analysis.2005

    • Author(s)
      Hashimoto M et al.
    • Journal Title

      Acta Neuropathol 109(2)

      Pages: 165-180

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Microarray analysis of hepatic gene expression during long-term cholestasis induced by common bile duct ligation in rats.

    • Author(s)
      Kojima K et al.
    • Journal Title

      Res. Commun. Mol. Pathol. Pharmacol. (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Microarray analysis of hepatic gene expression during logn-term cholestasis induced by common bile duct ligation in rats.

    • Author(s)
      Kojima K et al.
    • Journal Title

      Res.Commun.Mol.Pathol.Pharmacol. (In press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] Kojima.K, Hosokawa.M, Kobayashi.K, Tainaka.H, Chiba.K: "Microarray analysis of hepatic gene expression during logn-term cholestasis induced by common bile duct ligation in rats."Res.Commun.Mol.Pathol.Pharmacol.. (印刷中). (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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