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Characterization of CYP2C9-splicing variant isolated from human liver

Research Project

Project/Area Number 15390171
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied pharmacology
Research InstitutionChiba University

Principal Investigator

ARIYOSHI Noritaka  Chiba Univ., Sch.Med., Div.Pharmacy, Univ.Hosp., associate Prof., 医学部附属病院, 助教授 (00243957)

Co-Investigator(Kenkyū-buntansha) ISHII Itsuko  Chiba Univ., Graduate Sch of Pharmacy, associate Prof., 大学院・薬学研究院, 助教授 (00202929)
KITADA Mitsukazu  Chiba Univ., Sch.Med., Div.Pharmacy, Univ.Hosp., Prof., 医学部附属病院, 教授 (90110345)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥10,100,000 (Direct Cost: ¥10,100,000)
Fiscal Year 2004: ¥7,600,000 (Direct Cost: ¥7,600,000)
Fiscal Year 2003: ¥2,500,000 (Direct Cost: ¥2,500,000)
KeywordsInterindividual difference in ability of drug metabolism / CYP2C9 / alternative splicing / hepatic steatosis / 遺伝的多型 / スプライシング / 異種細胞発現系
Research Abstract

The aim of this study was to characterize a novel CYP2C9-splicing variant, which has recently been cloned from the human liver in our laboratory, and clarify whether or not physiological factors such as hepatic steatosis were involved in inter-and/or intraindividual differences in an ability of drug metabolism via alteration of splicing manner.
The CYP2C9-splicing variant contained the beginning of intron 1, but lost the beginning of exon 2. Interestingly, however, no frameshift due to insertion of the part of intron1 and deletion of the part of exon2 was observed. Thus, the splicing variant assumed to be expressed as protein consisted by 482 amino acid residues. Since the intact (original) form of CYP2C9 possesses 490 amino acids, the lack of 8 amino acids might change or lose function of the monooxygenase. The heterologous expression system using bacurovirus-insect cells of this splicing variant together with original form and CYP2C9.3, which is one of the polymorphic proteins were co … More nstructed to investigate various properties of translated protein. Western blotting revealed that the splicing variant was indeed translated to a protein, which was recognized by CYP2C9-specific antibody. Apparent molecular weight was slightly smaller than that of either original CYP2C9 (CYP2C9.1) or CYP2C9.3. The most curiously, translated splicing variant showed CO-difference spectrum being typical for cytochrome P450. Therefore, we tried to measure catalytic activity of tolbutamide and diclofenac, both of which are well known to be specific substrate of CYP2C9. However, the translated splice variant had no ability to metabolize both drugs. To explore the possibility that the lack of 8 amino acids alters the substrate specificity, metabolic study using bufurarol and triazolam, which are specific substrate for CYP2D6 and CYP3A4, respectively, was conducted. Again, no catalytic activity was shown for either drugs. According to the results described above, translated splicing variant seemed to have no activity to at least exogenous compounds (xenobiotics). To clarify whether the splicing manner can be altered by hepatic steatosis, mRNA encoding original CYP2C9 and splicing variant were quantified by real-time PCR. As a results, splicing variant mRNA was more abundant compared to the mRNA encoding original CYP2C9 in two out of three individuals with hepatic steatosis. Less

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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