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Study on actual status of adult rotavirus infections in Southern Asia and Southeastern Asia

Research Project

Project/Area Number 15406028
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section海外学術
Research Field Hygiene
Research InstitutionSapporo Medical University

Principal Investigator

KOBAYASHI Nobumichi  Sapporo Medical University, School of Medicine, professor, 医学部, 教授 (80186759)

Co-Investigator(Kenkyū-buntansha) KOJIMA Kazunobu  Sapporo Medical University, School of Medicine, assistant professor, 医学部, 講師 (20264517)
ISHINO Masaho  Sapporo Medical University, School of Medicine, associate professor, 医学部, 助教授 (30232325)
TANIGUCHI Koki  Fujita Health University, School of Medicine, professor, 医学部, 教授 (40094213)
MISE Keiji  Sapporo Medical University, School of Medicine, instructor, 医学部, 助手 (30200025)
SUMI Ayako  Sapporo Medical University, School of Medicine, assistant professor, 医学部, 講師 (10363699)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥11,400,000 (Direct Cost: ¥11,400,000)
Fiscal Year 2005: ¥2,600,000 (Direct Cost: ¥2,600,000)
Fiscal Year 2004: ¥3,300,000 (Direct Cost: ¥3,300,000)
Fiscal Year 2003: ¥5,500,000 (Direct Cost: ¥5,500,000)
Keywordsrotavirus / diarrhea / adult / Southern Asia / Southeast Asia / typing / gene / sequence / 下痢 / アジア / G型 / P型 / NSP4
Research Abstract

The purpose of this study is to characterize rotaviruses which cause diarrheal diseases in adults in Southern Asian and Southeast Asian regions. This study was performed in collaboration with India, Bangladesh, Thailand, and China. Stool specimens were collected from diarrheal patients in a period between 2003 and 2005. While detection rate of group A rotavirus in children was 25-35%, detection rate in adult ranged from approx. 1% to 10%. In the study in China, most rotavirus strains from children and adults showed identical antigenic types. Group B rotavirus was detected in adult stool specimens in Bangladesh (14 specimens) and China (2 specimens). In India, group B rotavirus was detected by RT-PCR in about 20% of diarrheal stool specimens from children. Phylogenetic analysis of the group B rotaviruses from individual countries indicated that the viruses from India and Bangladesh were genetically closely related but distinct from Chinese viruses. The Indian-Bangladeshi group B rotavir … More uses and Chinese viruses were suggested to be diverged from a common ancestral virus approximately 60-70 years ago based on estimation of mutation rate calculated for Chinese virus strains. In Bangladesh, an unusual rotavirus strain was detected. This virus was genetically different from the known group A, B, and C rotaviruses, and suggested to represent a novel species (group) of rotavirus. As a study on special characteristic of group B rotavirus, i.e., causing diarrhea primarily in adults, nonstructural protein NSP4 was studied for its sequence diversity and presence of enterotoxin activity which is known as one of the mechanisms causing diarrhea in animals. As a result, group B rotavirus NSP4 exhibited high degree of sequence divergence from group A rotavirus NSP4, however, it was demonstrated that sequences near the C-terminal region possess enterotoxin activity in suckling mice. These findings suggested that group B rotavirus may have similar mechanisms for causing diarrhea in human to group A rotavirus. Less

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (28 results)

All 2006 2005 2004 2003 Other

All Journal Article (20 results) Book (2 results) Publications (6 results)

  • [Journal Article] Comparison of NSP4 protein between group A and B human rotaviruses : detection of novel diarrhea-causing sequence in group B NSP4.2006

    • Author(s)
      Ishino M, Mise K, et al.
    • Journal Title

      Archives of Virology 151

      Pages: 173-182

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] An outbreak of rotavirus infection among adults in an institution for rehabilitation : long-term residence in a closed community as a risk factor for rotavirus illness.2006

    • Author(s)
      Iijima Y, iwamoto T, et al.
    • Journal Title

      Scadinavian Journal of Infectious Disease (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular characterization of a porcine Group A rotavirus strain with G12 genotype specificity.2006

    • Author(s)
      Ghosh S, Varghese V, et al.
    • Journal Title

      Archives of Virology (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] RT-PCR based diagnosis revealed importance of human group B rotavirus infection in childhood diarrhea.2006

    • Author(s)
      Barman P, Ghosh S, et al.
    • Journal Title

      Journal of Clinical Virology (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Comparison of NSP4 protein between group A and B human rotaviruses : detection of novel diarrhea-causing sequence in group B NSP4.2006

    • Author(s)
      Ishino M, Mise K, Takemura H, Ahmed MU, Alam MM, Naik TN, Kobayashi N.
    • Journal Title

      Archives of Virology 151

      Pages: 173-182

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] An outbreak of rotavirus infection among adults in an institution for rehabilitation : long-term residence in a closed community as a risk factor for rotavirus illness.2006

    • Author(s)
      Iijima Y, Iwamoto T, Nukuzuma S, Ohishi H, Hayashi K, Kobayashi N.
    • Journal Title

      Scandinavian Journal of Infectious Diseases (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular characterization of a porcine Group A rotavirus strain with G12 genotype specificity.2006

    • Author(s)
      Ghosh S, Varghese V, Samajdar S, Bhattacharya SK, Kobayashi N, Naik TN.
    • Journal Title

      Archives of Virology (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] RT-PCR based diagnosis revealed importance of human group B rotavirus infection in childhood diarrhoea.2006

    • Author(s)
      Barman P, Ghosh S, Samajdar S, Mitra U, Dutta P, Bhattacharya SK, Krishnan T, Kobayashi N, Naik TN.
    • Journal Title

      Journal of Clinical Microbiology (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] An outbreak of rotavirus infection among adults in an institution for rehabilitation : long-term residence in a closed community as a risk factor for rotavirus illness.2006

    • Author(s)
      Iijima Y, Iwamoto T, et al.
    • Journal Title

      Scadinavian Journal of Infectious Disease (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Characterization of VP1, VP2 and VP3 gene segments of a human rotavirus closely related to porcine strains.2006

    • Author(s)
      Varghese V., Ghosh S, et al.
    • Journal Title

      Virus Genes (in press)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Proportion of sporadic gastroenteritis cases caused by rotavirus,norovirus,adenovirus,and bacteria in Japan from January 2000 to December 2003.2005

    • Author(s)
      Sumi A, Kobayashi N, Ohtomo N.
    • Journal Title

      Microbiology and Immunology 49

      Pages: 745-756

    • NAID

      10016672270

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Proportion of sporadic gastroenteritis cases caused by rotavirus, norovirus, adenovirus, and bacteria in Japan from January 2000 to December 2003.2005

    • Author(s)
      Sumi A, Kobayashi N, Ohtomo N.
    • Journal Title

      Microbiology and Immunology 49

      Pages: 745-756

    • NAID

      10016672270

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Proportion of sporadic gastroenteritis cases caused by rotavirus, norovirus, adenovirus, and bacteria in Japan from January 2000 to December 2003.2005

    • Author(s)
      Sumi.A, Kobayashi N, Ohtomo N.
    • Journal Title

      Microbiology and Immunology 49

      Pages: 745-756

    • NAID

      10016672270

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Genetic analysis of group B human rotaviruses detected in Bangladesh in 2000 and 2001.2004

    • Author(s)
      Ahmed MU, Kobayashi N, et al.
    • Journal Title

      Journal of Medical Virology 72

      Pages: 149-155

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genetic analysis of group B human rotaviruses detected in Bangladesh in 2000 and 20012004

    • Author(s)
      Ahmed MU, Kobayashi N, Wakuda M, Sanekata T, Taniguchi K, Kader A, Naik TN, Ishino M, Alam MM, Kojima K, Mise K, Sumi A.
    • Journal Title

      Journal of Medical Virology 72

      Pages: 149-155

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Genetic Variability of human rotavirus strains isolated from eastern and northern India2004

    • Author(s)
      Das S, Kobayashi N., et al.
    • Journal Title

      J.Med.Virol. 72

      Pages: 156-161

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Molecular characterization of human rotavirus reveals porcine characteristics in most of the genes including VP6 and NSP42004

    • Author(s)
      Varghese V., Kobayashi N., et al.
    • Journal Title

      Arch.Virol. 149

      Pages: 155-172

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Genetic analysis of group B human rotaviruses detected in Bangladesh in 2000 and 20012004

    • Author(s)
      Ahmed M.U., Kobayashi N., et al.
    • Journal Title

      J.Med.Virol. 72

      Pages: 149-155

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Sequencing and sequence analysis of VP7 and NSP5 genes reveal emergence of a new genotype of bovine group B rotaviruses in India2004

    • Author(s)
      Barman P., Kobayashi N., et al.
    • Journal Title

      J.Clin.Microbiol. 42

      Pages: 2816-2818

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Phylogenetic analysis of human group B rotavirus WH-1 detected in China in 20022004

    • Author(s)
      Yang, J-H., Kobayashi N., et al.
    • Journal Title

      J.M.Virol. 74

      Pages: 662-667

    • Related Report
      2004 Annual Research Report
  • [Book] Genetic diversity and molecular epidemiology of rotaviruses.2003

    • Author(s)
      Kobayashi N, ed.
    • Total Pages
      117
    • Publisher
      Research Signpost
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Book] Genetic diversity and molecular epidemiology of rotaviruses.2003

    • Author(s)
      Kobayashi N, ed.
    • Publisher
      Research Signpost, Trivandrum, India
    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] Ahmed MU, et al.: "Genetic analysis of group B human rotaviruses detected in Bangladesh in 2000 and 2001"Journal of Medical Virology. 72. 149-155 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Das S, et al.: "Genetic variability of human rotavirus strains isolated from eastern and northern India"Journal of Medical Virology. 72. 156-161 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Varghese V, et al.: "Molecular characterization of a human rotavirus reveals porcine characteristics in most of the genes including VP6 and NSP4"Archives of Virology. 149. 155-172 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sumi A, et al.: "Prediction analysis for measles epidemics"Japanese Journal of Applied Physics. 42. 7611-7620 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 小林宣道, 石埜正穂, 王遠虹: "臨床微生物学-注目される最近の展開-II ウイルスのジェノタイプロタウイルス"臨床と微生物. 31. 155-161 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kobayashi N, et al.: "Research Signpost"Genetic diversity and molecular epidemiology of rotaviruses. 23 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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