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Study of the method of structured data entry of medical records and its data analysis

Research Project

Project/Area Number 15500341
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Medical systems
Research InstitutionOSAKA UNIVERSITY

Principal Investigator

MATSUMURA Yasushi  Osaka University, Hospital, Associate Professor, 医学部附属病院, 助教授 (90252642)

Co-Investigator(Kenkyū-buntansha) TAKEDA Hiroshi  Osaka University, Graduate School of Medicine, Professor, 医学系研究科, 教授 (20127252)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2004: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 2003: ¥1,800,000 (Direct Cost: ¥1,800,000)
Keywordselectronic patient record / data warehouse / Structured data entry / template / XML / progress note / discharge summary / examination report / テンプレート / 構造化データ / XMK / リレーショナルデータベース / プログレスノート
Research Abstract

In electronic patient record (EPR) systems, progress notes, summaries, operation reports, examination reports are recorded. These records includes significant data for clinical research, thus the precise data extraction method is expected. These records are usually entered in free text format because of its variety. But the data extraction from the records in free text format is difficult. In this study, we developed the method for structured data entry and retrieving of any data from the variety of records.
We developed the data entry module named "Dynamic Template". By using this template, data elements (item and value pair) are arranged in tree structure. These data are presented in XML.
For data analysis, data warehouse (DWH) solution is generally recommended, in which data are transferred from daily active database to the DWH. We had developed DWH for order entry system. In this study, we developed DWH for EPR.
We used relational database for the DWH. One data element is stored in one record. Patient ID, entry date, data recorder, item, path, value, suffix are the main fields. The items and the values selected from the list have their own ID. Each data element is uniquely identified by the path data.
In this DWH, data about blood pressure, heart rate, heart sound are stored by the templates. We searched the case with suspicion of mitral valve or tricuspid valve regurgitation, suspicion of aortic valve regurgitation, severe hypertension, and suspicion of pheochromocytoma from the DWH. We searched 28 cases, 4 cases, 34 cases and 40 cases, respectively by the relatively simple SQL.
By the method mentioned above, we could search precisely the case from the huge variety of records entered in EPR system.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (23 results)

All 2004 2003 Other

All Journal Article (16 results) Publications (7 results)

  • [Journal Article] Creation of a Master Table for Checking Indication and Cotraindication of Medicine from a Knowledge base Linked with aThesaurus.2004

    • Author(s)
      Ji S, Matsumura Y, Takeda H et al.
    • Journal Title

      J Medical Systems 28(6)

      Pages: 561-573

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Method of transforming of structured data into narrative form2004

    • Author(s)
      Matsumura Y, Takeda H.
    • Journal Title

      Medinfo. 2004

      Pages: 1746-1746

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Creation of a master table for checking indication and contraindi-cation of medicine from a knowledge base linked with a thesaurus.2004

    • Author(s)
      Ji S, Matsumura Y, Takeda H et al.
    • Journal Title

      J Medical Systems Dec 28(6)

      Pages: 561-573

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Creation of a Master Table for Checking Indication and Contraindication of Medicine from a Knowledge base Linked with a Thesaurus.2004

    • Author(s)
      Ji S, Matsumura Y, Takeda H et al.
    • Journal Title

      J Medical Systems 28(6)

      Pages: 561-573

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Method of transforming of structured data into narrative form2004

    • Author(s)
      Matsumura Y, Takeda H.
    • Journal Title

      Medinfo.2004

      Pages: 1746-1746

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Similar cases retrieval from the databese of laboratory test results2003

    • Author(s)
      Yang Z, Matsumura Y, Takeda H et al.
    • Journal Title

      J. Medical Systems 27(3)

      Pages: 271-283

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Health care quality management by means of an incident report system and an electronic patient record system.2003

    • Author(s)
      Takeda H, Matsumura Y, et al.
    • Journal Title

      International Journal of Medical Informatics 69

      Pages: 285-293

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] 動的テンプレート入力支援システムの現状2003

    • Author(s)
      松村泰志
    • Journal Title

      新医療 9

      Pages: 70-73

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Similar cases retrieval from the database of laboratory test results2003

    • Author(s)
      Yang Z, Mastumura Y, Takeda H et al.
    • Journal Title

      J.Medical Systems 27(3)

      Pages: 271-283

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Health care quality management by means of an incident report system and an electronic patient record system2003

    • Author(s)
      Takeda H, Matsumura Y, et al.
    • Journal Title

      International Journal of Medical Informatics 69

      Pages: 285-293

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Current status of data entry by Dynamic Template2003

    • Author(s)
      Matsumura Y.
    • Journal Title

      Shin-iryo 9

      Pages: 70-73

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 電子カルテの課題2003

    • Author(s)
      松村泰志
    • Journal Title

      メディカルレコード 29:1

      Pages: 8-30

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 電子カルテの現状と課題2003

    • Author(s)
      松村泰志
    • Journal Title

      最新医学 58(8)

      Pages: 1842-1844

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Analysis of Yearly Variations in Drug Expenditure for One Patient using Data Warehouse in a Hospital.

    • Author(s)
      Chen Y, Matsumura Y, Takeda H
    • Journal Title

      Computer Methods and Programs in Biomedicine (in press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Yearly Variations in Drug Expenditure for One Patient using Data Warehouse in a Hospital.

    • Author(s)
      Chen Y, Matsumura Y, Takeda H.
    • Journal Title

      Computer Methods and Programs in Biomedicine (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Yearly Variations in Drug Expenditure for One Patient using Data Warehouse in a Hospital.

    • Author(s)
      Chen Y, Matsumura Y, Takeda H
    • Journal Title

      Computer Methods and Programs in Biomedicine (in press)

    • Related Report
      2004 Annual Research Report
  • [Publications] Ji S, Matsumura Y, Kuwata S, Nakano H, Chen Y, Teratani T, Zhang Q, Mineno T, Takeda H: "Creation of a Master Table for Checking Indication and Contraindication of Medicine from a Knowledge base Linked with a Thesaurus"J Medical Systems. (in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takeda H, Matsumura Y, Nakajima K, Kuwata S, Zhenjun Y, Shanmai Ji, Qiyan Z, Yufen C, Kusuoka H, Inoue M: "Health care quality management by means of an incident report system and an electronic patient record system"International Journal of Medical Informatics. 69. 285-293 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Chen Y, Matsumura Y, Nakagawa K, Ji s, Nakano H, Teratani T, Zhang Q, Mineno T, Takeda H: "Analysis of Yearly Variations in Drug Expenditure for One Patient using Data Warehouse in a Hospital"Computer Methods and Programs in Biomedicine. (in press). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 佐藤雄亮, 松村泰志, 中野裕彦, 松村憲和, 湊 小太郎, 紀山枚, 陳 宇峰, 武田裕: "Webを利用した診療情報提供システムにおける柔軟な閲覧権コントロール"生体医工学. 41(4). 369-376 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] 中島和江, 松村泰志, 桑田成規, 長浜宗敏, 武田 裕: "医療の質評価システム構築を目的とした入院日数の分布とその影響要因に関する分析"医療情報学 23:1,15-21,2003. 23(1). 15-21 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 松村泰志: "動的テンプレート入力支援システムの現状"新医療. 9. 70-73 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 松村泰志: "電子カルテの課題"メディカルレコード. 29(1). 8-30 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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