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Analysis of error-prone polymerases in vertebrate cells

Research Project

Project/Area Number 15510049
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Risk sciences of radiation/Chemicals
Research InstitutionKyoto University

Principal Investigator

SONODA Eiichiro  Kyoto University, Graduate School of Medicine, Associate professor, 医学研究科, 助教授 (50281093)

Co-Investigator(Kenkyū-buntansha) TANO Keizo  Kyoto University, Nuclear Reactor Center, Associate professor, 原子炉実験所, 助教授 (00183468)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,900,000 (Direct Cost: ¥3,900,000)
Fiscal Year 2004: ¥1,800,000 (Direct Cost: ¥1,800,000)
Fiscal Year 2003: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsDT40 / TLS polymerases / Translesion DNA synthesis / homologous recombination / rad30 / rev3 / Cisplatin / Postreplication repair / 損傷乗り越え修復 / 突然変異 / 損傷乗り越えポリメラーゼ
Research Abstract

Damaged DNA can be a serious threat to successful completion of DNA replication. If a replication fork encounters a damage on the template DNA it arrest, resulting in a large gap on daughter strand and occasionally a break. These lesions are processed by a mechanism called postreplication repair (PRR) that enables the DNA replication without removing the lesions. Two different repair pathways are thought to mediate PRR. Homologous recombination(HR) uses an undamaged sister duplex as a template to repair gaps and breaks. Translesion DNA synthesis (TLS), controlled by a putative E3 ubiquitine ligase Rad18 and E2 enzyme Rad6,relies on non-essential DNA polymerases such as polζ (Rev3/Rev7) and polη (Rad30) to synthesize DNA across the lesion. To study the molecular basis of PRR in vertebrates, we have established single and multiple knockout-mutants of Rev1,Rev3,Rev7,Rad18,Rad30,PolK,PolQ(involved in TLS) and Rad51 paralog and Rad54 (involved in HR) genes using chicken DT40 cells.
HR defect … More ive mutants showed a decreased level of sister chromatid exchange (SCE) which reflects a DNA repair process by crossover-type HR and accumulated spontaneous chromosomal breaks. In contrast, TLS mutants including rev1,rev3,rev7, polκ and rad18 mutants showed a significant increase in SCE, suggesting that in the absence of TLS,HR predominates to bypass the spontaneous damages. rev and rad18 mutants were highly sensitive to a wide range of DNA-damaging agents, including UV, ionizing radiation, MMS and cross-linking agents. rev single mutants and rev1/3/7 triple mutant showed almost comparable sensitivities against various genotoxic stresses, suggesting that Rev1 and polζ (Rev3/7) function as a functional unit in DNA damage response. On the other hand, rad30 and polκ showed the sensitivity only to UV, suggesting that each TLS polymerase play a distinctive role in DNA damage response. Interestingly, rev1 and rad30 but not rev3 mutant exhibited a significant decrease in the frequency of immunoglobulin gene conversion, suggesting the participation of these molecules in a recombination-based pathway, such as DNA synthesis step of intragenic homologous recombination. Thus, the molecules involved in TLS pathway play a variety of roles in DNA repair and recombination. Less

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (24 results)

All 2005 2004 2003 Other

All Journal Article (19 results) Publications (5 results)

  • [Journal Article] Multiple roles of vertebrate REV genes in DNA repair and recombination2005

    • Author(s)
      Okada T, Sonoda E, Yoshimura Y, Kawano Y, Saya H, Kohzaki M, Takeda S.
    • Journal Title

      Mol Cell Biol (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Similar effects of Brca2 truncation and Rad51 paralog deficiency on immunoglobulin V gene diversification in DT40 cells support an early role for2005

    • Author(s)
      Hatanaka A, Yamazoe M, Sale JE, Takata M, Yamamto K, Kitao H, Sonoda E et al.
    • Journal Title

      Mol Cell Biol 25

      Pages: 1124-1134

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Similar effects of Brca2 truncation and Rad51 paralog deficiency on immunoglobulin V gene diversificationin DT40 cells support an early role for Rad51 paralogs in homologous recombination.2005

    • Author(s)
      Hatanaka, A., Yamazoe, M., Sale, J.E., Takata, M., Yamamoto, K., Kitao, H., Sonoda, E., Kikuchi, K., Yonetani, Y., Takeda, S.
    • Journal Title

      Mol Cell Biol 25

      Pages: 1124-1134

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Multiple roles of vertebrate REV genes in DNA repair and recombination.2005

    • Author(s)
      Okada T., Sonoda E., Yoshimura Y., Kawano Y., Saya H., Kohzaki M., Takeda S.
    • Journal Title

      Mol Cell Biol (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Similar effects of Brca2 truncation and Rad51 paralog deficiency on immunoglobulin V gene diversification in DT40 cells support an early role for Rad51 paralogs in homologousrecombination.2005

    • Author(s)
      Hatanaka A, Yamazoe M, Sale JE, Takata M, Yamamoto K, Kitao H, Sonoda E et al.
    • Journal Title

      Mol Cell Biol 25

      Pages: 1124-1134

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Reverse genetic studies of the DNA damage response in the chicken B lymphocyte line DT40.2004

    • Author(s)
      Yamazoe, M, Sonoda, E, Hochegger, H, Takeda, S
    • Journal Title

      DNA Repair 3

      Pages: 1175-1185

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Analysis of Scc1-deficient cells defines a key metaphase role of vertebrate cohesin in linking sister kinetochores.2004

    • Author(s)
      Vagnarelli, P, Morrison, C, Dodson, H, Sonoda, E, Takeda, S, et al.
    • Journal Title

      EMBO Rep 5

      Pages: 167-171

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Recombination repair pathway in the maintenance of chromosomal integrity against DNA interstrand crosslinks.2004

    • Author(s)
      Sasaki, M.S., Takata, M., Sonoda, E., Tachibana, A., Takeda, S.
    • Journal Title

      Cytogenet Genome Res 104

      Pages: 28-34

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Extensive chromosomal breaks are induced by tamoxifen and estrogen in DNA repair-deficient cells.2004

    • Author(s)
      Mizutani, A., Okada, T., Shibutani, S., Sonoda, E., Hochegger, H., Nishigori
    • Journal Title

      Cancer Res 26

      Pages: 151-158

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Extensive chromosomal breaks are induced by tamoxifen and estrogen in DNA repair-deficient cells.2004

    • Author(s)
      Mizutani, A., Okada, T., Shibutani, S., Sonoda, E., Hochegger, H., Nishigori, C., Miyachi, Y., Takeda, S., Yamazoe, M.
    • Journal Title

      Cancer Res 64

      Pages: 3144-3147

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Analysis of Scc1-deficient cells defines a key metaphase role of vertebrate cohesin in linking sister kinetochores.2004

    • Author(s)
      Vagnarelli, P., Morrison, C., Dodson, H., Sonoda, E., Takeda, S., Earnshaw, W.C.
    • Journal Title

      EMBO Rep 5

      Pages: 167-171

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Centrosome amplification induced by DNA damage occurs during a prolonged G2 phase and involves ATM.2004

    • Author(s)
      Dodson, H., Bourke, E., Jeffers, L.J., Vagnarelli, P., Sonoda, E., Takeda, S., Earnshaw, W.C., Merdes, A., Morrison, C.
    • Journal Title

      EMBO J. 23

      Pages: 3864-3873

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Recombination repair pathway in the maintenance of chromosomal integrity against DNA interstrand crosslinks.2004

    • Author(s)
      Sasaki, M.S., Takata, M., Sonoda, E., Tachibana, A., Takeda, S.
    • Journal Title

      Cytogenet Genome Res, 104

      Pages: 28-34

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Reverse genetic studies of the DNA damage response in the chicken B lymphocyte line DT40.2004

    • Author(s)
      Yamazoe, M., Sonoda, E., Hochegger, H., Takeda, S.
    • Journal Title

      DNA Repair 3

      Pages: 1175-1185

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Analysis of Scc1-deficient cells defines a key metaphase role of vertebrate cohesin in linking sister kinetochores.2004

    • Author(s)
      Vagnarelli, P., Morris C., Dodson, H., Sonoda, E., Takeda, S., et al.
    • Journal Title

      EMBO Rep 5

      Pages: 167-171

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Recombination repair pathway in the maintenance of chromosomal integrity agains DNA interstrand crosslinks.2004

    • Author(s)
      Sasaki, M.S., Takata, M., Sonoda, E., Tachibana, A., Takeda, S.
    • Journal Title

      Cytogenet Genome Res 104

      Pages: 28-34

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Post-replication repair in DT40 cells : translesion polymerases versus recombinases.2004

    • Author(s)
      Hochegger, H., Sonoda, E., Takeda, S.
    • Journal Title

      Bioessays 26

      Pages: 151-158

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Multiple roles of Rev3, the catalytic subunit of polzeta in maintaining genome stability in vertebrates.2003

    • Author(s)
      Sonoda, E., Okada, T., Zhao, G.Y., Tateishi, S., Araki, K., Yamaizumi, M., Yagi, T., Verkaik, N.S., van Gent, D.C., Takata, M., Takeda, S.
    • Journal Title

      EMBO J 22

      Pages: 3188-3197

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Dynamic control of Rad51 recombinase by self-association and interaction with BRCA2.2003

    • Author(s)
      Yu, D.S., Sonoda, E., Takeda, S., Huang, C.L., Pellegrini, L., Blundell, T.L., Venkitaraman, A.R.
    • Journal Title

      Mol Cell 12

      Pages: 1029-1041

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Hochegger, H., Sonoda E., Takeda, S.: "Post-replication repair in DT40 cells : translesion polymerases versus recombinases"Bioessays. 26. 151-158 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Vagnarelli, P., Morrison, C., Dodson, H., Sonoda, E., Takeda, S., et al.: "Analysis of Scc1-deficient cells defines a key metaphase role of vertebrate cohesin in linking sister kinetochores"EMBO Rep. 5. 167-171 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Sonoda, E., Okada, T., Zhao, G.Y., Tateishi, S., Araki, K., Yamaizumi, M., et al.: "Multiple roles of Rev3, the catalytic subunit of polzeta in maintaining genome stability in vertebrates"Embo J. 22. 3188-3197 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yu, D.S., Sonoda, E., Takeda, S., Huang, C.L., Pellegrini, L., et al.: "Dynamic control of Rad51 recombinase by self-association and interaction with BRCA2"Mol Cell. 12. 1029-1041 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Morrison, C., Vagnarelli, P., Sonoda, E., Takeda, S., Earnshaw, W.C.: "Sister chromatid cohesion and genome stability in vertebrate cells"Biochem Soc Trans. 31. 263-265 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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