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Morphological and molecular evolution of Radiolaria based on the 18S rDNA study

Research Project

Project/Area Number 15540449
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Stratigraphy/Paleontology
Research InstitutionTokyo Gakugei University

Principal Investigator

TAKAHASHI Osamu  Tokyo Gakugei Univ., Astoro, Earth Sci., Associate Prof., 教育学部, 助教授 (20242232)

Co-Investigator(Kenkyū-buntansha) TAKEMURA Akihiko  Univ., Ryukyus, Tropi.Bio.Res.Cent., Associate Prof., 熱帯生物圏研究センター, 助教授 (40222103)
MATSUOKA Atsushi  Niigata Univ., Dept.Geol., Prof., 理学部, 教授 (00183947)
MAYAMA Shigeki  Tokyo Gakugei Univ., Biology, Associate Prof., 教育学部, 助教授 (40199914)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2005: ¥700,000 (Direct Cost: ¥700,000)
Fiscal Year 2004: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2003: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsPolycystinea / Acantharea / Phaeodarea / Nassellarida / Spumellarida / 18S rDNA / molecular phylogeny / Radiolaria / Spumellaria / Nassellaria / 18SrDNA / 系統樹 / 分子糸統
Research Abstract

The marine, holoplanktonic protists group called Phaeodarea is today represented by several hundred species. The phaeodarian skeletons consist of opaline silica as well as organic matter, and are very fragile and vulnerable to dissolution. Their tests are therefore rarely found in the fossil record, and this has caused much uncertainty around their phylogenetic evolution. In this study, three small, solitary phaeodarian species; Protocystis xiphodon (Haeckel), Challengeron diodon Haeckel, and Conchellium capsula Borgert were examined using molecular techniques in order to clarify the phylogenetic position of the Phaeodarea. The obtained phylogenetic trees for all analyses, the neighbor-joining, maximum-parsimony, and maximum-likelihood methods, combined with sequences of Polet et al. (2004) from large phaeodarian species, showed that the all phaeodarians formed a monophyletic group within Phylum Cercozoa. This result run counters to Haeckel's classical taxonomy grouping the phaeodarians together with the polycystines (i.e., nassellarians and spumellarians) and the achantharians, under the common name Radiolaria, and suggesting a monophyly for these groups. Our results strongly suggested the polyphyly of Radiolaria.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (17 results)

All 2006 2005 2004 2003 Other

All Journal Article (15 results) Publications (2 results)

  • [Journal Article] Phylogenetic position of the small solitary phaeodarians (Radiolaria) based on 18S rDNA sequences by single cell PCR analysis.2006

    • Author(s)
      T.Yuasa, O.Takahashi, J.K.Dolven, S.Mayama, A.Matsuoka, D.Honda, K.R.Bjorklund
    • Journal Title

      Marine Micropaleontology 59

      Pages: 104-114

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Phylogenetic analysis of the polycystine Radiolaria based on the 18S rDNA sequences of the Spumellarida and the Nassellarida.2005

    • Author(s)
      Yuasa, T. et al.
    • Journal Title

      European Journal of Protistology 41-1

      Pages: 287-298

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] 18S rDNAに基づく放散虫類の分子系統関係2005

    • Author(s)
      湯浅ほか
    • Journal Title

      原生動物学雑誌 38

      Pages: 22-23

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Phylogenetic position of the small solitary phaeodarians (Radiolaria) based on 18S rDNA sequences by single cell PCR analysis2005

    • Author(s)
      Yuasa, T. et al.
    • Journal Title

      Marine Micropaleontology 59

      Pages: 104-114

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Phylogenetic analysis of the polycystine Radiolaria based on the 18S rDNA sequences of the Spumellarida and the Nassellarida.2005

    • Author(s)
      T.Yuasa, O.Takahashi, D.Honda, S.Mayama
    • Journal Title

      European Journal of Protistology 41-4

      Pages: 287-298

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] PCR primers for the amplification of the nuclear small subunit ribosomal DNA sequences from polycystine radiolarians.2004

    • Author(s)
      Yuasa, T. et al.
    • Journal Title

      Japanese Journal of Protozoology 37

      Pages: 133-137

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Phaeodarian Radiolaria from the Upper Cretaceous beds of the central Japan.2004

    • Author(s)
      O.Takahashi
    • Journal Title

      Revue de micropaleontologie 47-3

      Pages: 119-125

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular phylogeny of the solitary shell-bearing Polycystinea (Radiolaria)2004

    • Author(s)
      O.Takahashi et al.
    • Journal Title

      Revue de micropaleontologie 47-3

      Pages: 111-118

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] PCR primers for the amplification of the nuclear small subunit ribosomal DNA sequences from polycystine radiolarians.2004

    • Author(s)
      T.Yuasa, O.Takahashi, S.Mayama
    • Journal Title

      Japanese Journal of Protozoology 37

      Pages: 133-137

    • NAID

      130007430772

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular phylogeny of the solitary shell-bearing Polycystinea (Radiolaria).2004

    • Author(s)
      O.Takahashi, T.Yuasa, D.Honda, S.Mayama
    • Journal Title

      Revue de micropaleontologie 47(3)

      Pages: 111-118

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Phaeodarian Radiolaria from the Upper Cretaceous beds of the central Japan.2004

    • Author(s)
      O.Takahashi
    • Journal Title

      Revue de micropaleontologie 47(3)

      Pages: 119-125

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Molecular phylogeny of the solitary shell-bearing Polycystinea (Radiolaria)2004

    • Author(s)
      Takahashi, O., Yuasa, T., Honda, D., Mayama, S.
    • Journal Title

      Revue de Micropaleontlogie 47-3

      Pages: 111-118

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Phaeodarian Radiolaria from the Upper Cretaceous beds of the central Japan2004

    • Author(s)
      O.Takahashi
    • Journal Title

      Revue de micropaleontologie 47-3

      Pages: 119-125

    • Related Report
      2004 Annual Research Report
  • [Journal Article] PCR primers for the amplification of the nuclear small subunit ribosomal DNA sequences from polycystine radiolarians2004

    • Author(s)
      T.Yuasa, O.Takahashi, S.Mayama
    • Journal Title

      Japanese Journal of Protozoology 37-2

      Pages: 133-137

    • NAID

      130007430772

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Host-symbiont associations of polycystine Radiolaria : epifluorescence microscopic observation of living Radiolaria.2003

    • Author(s)
      O.Takahashi, S.Mayama, A.Matsuoka
    • Journal Title

      Marine Micropaleontology 49

      Pages: 187-194

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] Takahashi, O., Mayama, S., Matsuoka A.: "Host-symbiont assocition of polycystine Radiolaria : epifluoresence microscopic observation of living Radiolaria"Marine Micropaleontlogy. 49-3. 187-194 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Takahashi, O., Yuasa, T., Honda, D., Mayama, S.: "Molecular phylogeny of the solitary shell-bearing Polycystinea (Radiolaria)"Revue de Micropaleontlogie. 47-2(in press). (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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