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Absolute Configuration Determination of Chiral Compounds Using a Novel Crystalline Agent

Research Project

Project/Area Number 15550033
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Organic chemistry
Research InstitutionNagahama Institute of Bio-Science and Technology (2004)
Kyoto University (2003)

Principal Investigator

KAWAI Yasushi  Nagahama Institute of Bio-Science and Technology, Associate Professor, バイオサイエンス学部, 助教授 (20240830)

Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2004: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2003: ¥2,800,000 (Direct Cost: ¥2,800,000)
KeywordsChiral Compound / Absolute Configuration / X-Ray Crystallography / Anomalous Dispersion Effect / Chiral Ketone / Crystalline Agent
Research Abstract

Chiral ketones are versatile intermediates of natural products and seen in the structure of biologically active compounds such as terpenes, pheromones, and so on. However, few studies are found in the literature for the direct method to determine the absolute configurations of these chiral ketones. X-Ray crystallographic analysis is the only method to determine the absolute configuration of a molecule. The anomalous dispersion effect of a heavy atom must be used for the determination of the absolute configuration. Hydrazines are well-known to be good crystalline agents for ketones. Thus, a phenylhydrazine derivative having a halogen atom is employed as a crystalline agent. We designed and synthesized some hydrazines as crystalline agents, and found that 2-chloro-4,6-dinitrophenyihydrazine is the useful crystalline agent for various chiral ketones. 2-Chooro-4,6-dinitroaniline is a weak base because of two nitro groups and a chlorine atom, so that diazotization does not occur with a conv … More entional way. Therefore, the aniline dissolved in hot acetic add was diazotized with nitrosyl sulfate prepared from sodium nitrite and sulfuric acid, and iodinated with potassium iodide to afford 1-chloro-2-iodo-3,5-dinitrobenzene. It was stirred with hydrazine monohydrate in methanol at room temperature to give the desired hydrazine. The reaction of the hydrazine and a chiral ketone gave the single crystal suitable for X-ray crystallographic analysis. The crystal structure and absolute configuration of the corresponding hydrazone was determined using the anomalous dispersion effect of a chlorine atom. The absolute configurations were successfully determined by Flack parameter and intensities comparison of Bijvoet pairs. This is the simple and direct method and the potential of this methodology was clearly demonstrated. 2-Chloro-4,6-dinitrophenylhdrazine is a useful crystalline agent for the absolute configuration determination. This method can be applied to terpenes and pheromones, and is helpful for the determination of the absolute configuration of various chiral ketones. Less

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (15 results)

All 2005 2004 2003 Other

All Journal Article (13 results) Publications (2 results)

  • [Journal Article] Chlorodinitrophenylhydrazine, a Useful Crystalline Agent for Absolute Configuration Determination of Various Chiral Ketones2005

    • Author(s)
      Yasushi Kawai
    • Journal Title

      Tetrahedron 61・21

      Pages: 5049-5055

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Synthesis, structure, and electrochemical properties of biferrocenes annulated with 1,2-dithiin and 1,2-ditiin 1,1-dioxides2005

    • Author(s)
      Noriyoshi Nagahora
    • Journal Title

      Tetrahedron Letters 46・24

      Pages: 4157-4160

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Generation and Structure Determination of 5,6-Bis(methylthio)-4,7-diethylbenzo[1,2,3]trithiole Dication MBT(2+)2005

    • Author(s)
      Takeshi Kimura
    • Journal Title

      Heteroatom Chemistry 16・2

      Pages: 111-120

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Chlorodinitrophenylhydrazine, a Useful Crystalline Agent for Absolute Configuration Determination of Various Chiral Ketones2005

    • Author(s)
      Yasushi Kawai
    • Journal Title

      Tetrahedron 61

      Pages: 5049-5055

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Synthesis, structure, and electrochemical properties of biferrocenes annulated with 1,2-dithiin and 1,2-ditiin 1,1-dioxides2005

    • Author(s)
      Noriyoshi Nagahora
    • Journal Title

      Tetrahedron Letters 46

      Pages: 4157-4160

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Generation and Structure Determination of 5,6-Bis(methylthio)-4,7-diethylbenzo[1,2,3]trithiole Dication MBT(2+)2005

    • Author(s)
      Takeshi Kimura
    • Journal Title

      Heteroatom Chemistry 16

      Pages: 111-120

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Chlorodinitrophenylhydrazine, a Useful Crystalline Agent for absolute Configuration Determination of Various Chiral Ketones2005

    • Author(s)
      Yasushi Kawai
    • Journal Title

      Tetrahedron (印刷中)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Preparation of Phthalocyanines with Eight Benzylchalcogeno Substituents from 5,6-Dibromo-4,7-diethylbenzo[1,2,3]trichalcogenoles2004

    • Author(s)
      Takeshi Kimura
    • Journal Title

      The Journal of Organic Chemistry 69・14

      Pages: 4716-4723

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Preparation of Phthalocyanines with Eight Benzylchalcogeno Substituents from 5,6-Dibromo-4,7-diethylbenzo[1,2,3] trichalcogenoles2004

    • Author(s)
      Takeshi Kimura
    • Journal Title

      The Journal of Organic Chemistry 69

      Pages: 4716-4723

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The chemistry of zerumbone. Part 5: Structural transformation of the dimethylamine derivative2003

    • Author(s)
      Takashi Kitayama
    • Journal Title

      Tetrahedron 59・26

      Pages: 4857-4866

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Design of Reversible Low Redox Potential Systems Using Five-membered Tricharcogenaheterocycles Containing Heavy Chalcogens ; Sulfur, Selenium, and Tellurium2003

    • Author(s)
      Noriyoshi Nagahora
    • Journal Title

      Bulletin of the Chemical Society of Japan 76・5

      Pages: 1043-1054

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The chemistry of zerumbone. Part 5 : Structural transformation of the dimethylamine derivative2003

    • Author(s)
      Takashi Kitayama
    • Journal Title

      Tetrahedron 59

      Pages: 4857-4866

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Design of Reversible Low Redox Potential Systems Using Five-membered Tricharcogenaheterocycles Containing Heavy Chalcogens ; Sulfur, Selenium, and Tellurium2003

    • Author(s)
      Noriyoshi Nagahora
    • Journal Title

      Bulletin of the Chemical Society of Japan 76

      Pages: 1043-1054

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Takashi Kitayama: "The chemistry of zerumbone. Part5: Structural transformation of the dimethylamine derivative"Tetrahedron. 59・26. 4857-4866 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Noriyoshi Nagahora: "Design of Reversible Low Redox Potential Systems Using Five-membered Tricharcogenaheterocycles Containing Heavy Chalcogens ; Sulfur, Selenium, and Tellurium"Bulletin of the Chemical Society of Japan. 76・5. 1043-1054 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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