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Analysis of evolution and phylogeny of snakes of Trimeresurus genus in the southwestern islands of Japan based on structural information of venom-gland isozymes

Research Project

Project/Area Number 15570089
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Biodiversity/Systematics
Research InstitutionSojo University

Principal Investigator

OHNO Motonori  Sojo University, Dept of Applied Life Science, Professor, 工学部, 教授 (30038434)

Co-Investigator(Kenkyū-buntansha) CHIJIWA Takahito  Sojo University, Dept of Applied Life Science, Lecturer, 工学部, 講師 (30331060)
HATTORI Shosaku  University of Tokyo, Institute of Medical Science, Associate Professor, 医科学研究所, 助教授 (00164864)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,200,000 (Direct Cost: ¥3,200,000)
Fiscal Year 2004: ¥1,200,000 (Direct Cost: ¥1,200,000)
Fiscal Year 2003: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsSnakes of Trimeresurus genus / Southwestern islands of Japan / Evolution / Phylogeny / Phospholipase A_2 isozymes / Amino acid sequence / cDNA cloning / cDNA / 南西諸島・台湾 / 第四紀陸橋
Research Abstract

1. Interisland mutation of Trimeresurus flavoviridis venom phospholipase A_2 (PLA_2) isozymes.
The venoms of T.flavoviridis snakes from Amami-Oshima, Tokunoshima and Okinawa islands contain basic [Asp^<49>]PLA_2s called PLA-B', PLA-B and PL-Y, respectively. They have 1-4 amino acid substitutions that are considered due to occurrence of interisland mutation under isolated environments. A neurotoxic PLA_2 isolated from Amami-Oshima T.flavoviridis venom was named PLA-N. Tokunoshima T.flavoviridis venom also contained this isozyme but Okinawa T.flavoviridis venom contains one amino acid-substituted homolog, called PLA-N(O). This is also a example of interisland mutation. It is speculated that Okiawa island first splitted from the original island and then the rest was disunited into Amami-Oshima and Tokunoshima.
2. Evolution and phylogeny of snakes of Trimeresurus genus in the southwestern islands of Japan
Two novel PLA_2 isozymes with Arg at position 49 ([Arg^<49>]PLA_2) were isolated from T.elegans venom and named TeBP(R)-I and TeBP(R)-II. They are polymorphic at position 3, Val for TeBP(R)-I and lle for TeBP(R)-II. A cDNA encoding [Asp49]PLA_2 called TePLA_2 was cloned from its venom gland. A neutral [Asp49]PLA_2 was purified to homogeneity from T.tokarensis venom. However, production of its venom gland cDNA library failed. A phylogenetic tree was constructed for venom PLA_2 isozymes of Trimeresurus genus, except for T.tokarensis, in the southwestern islands of Japan. In the branch of [Lys49]PLA_2-type group, TeBP(R)-I and TeBP(R)-II of T.elegans are much closer to TmK49PLA_2 of T.mucrosquamatus than TfBPI and TfBPI of T.flavoviridis. In PLA2-type group, TePLA_2 is closer to TmPLA_2 than TfPLA2. Thus, T.elegans is the species closer to T.mucrosquamatus than T.flavoviridis. In addition, it is clearly noted that T.okinavensis and T.gramineus are the species fairly distant from T.flavoviridis, T.elegans and T.mucrosquamatus.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (16 results)

All 2005 2004 2003 Other

All Journal Article (14 results) Publications (2 results)

  • [Journal Article] Molecular diversity and accelerated evolution of C-type lectin-like proteins2005

    • Author(s)
      Ogawa et al.
    • Journal Title

      Toxicon 45

      Pages: 1-14

    • Related Report
      2004 Annual Research Report
  • [Journal Article] ハブ毒を科学する-機能の多様性と加速進化2004

    • Author(s)
      上田直子, 千々岩崇仁, 大野素徳
    • Journal Title

      化学と生物 42

      Pages: 687-693

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] ハブ毒を科学する一機能の多様性と加速進化2004

    • Author(s)
      上田直子, 千々岩崇仁, 大野素徳
    • Journal Title

      化学と生物 42

      Pages: 687-693

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Interisland evolution of Trimeresurus flavoviridis venom phospholipase A_2 isozymes2003

    • Author(s)
      Chijiwa, T.et al.
    • Journal Title

      Journal of Molecular Evolution 56

      Pages: 286-293

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Necrosis and regeneration of the skeletal muscle without a marked hemorrhage induced in the rat by envenomation of Trimeresurus flavoviridis venom and its components, phospholipase A_2 isozymes2003

    • Author(s)
      Kitano, M.et al.
    • Journal Title

      The Progress Report of the 2000 and 2001 Survey of the Research Project "Social Hemostasis of Small Islands in an Island Zone" Occasional Papers 38

      Pages: 105-111

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Prevention of muscle necrosis induced in rats after envenomation of Trimeresurus flavoviridis (Amami-Oshima island) venom and its compoents, phospholipase A_2 isozymes2003

    • Author(s)
      Kitano, M.et al.
    • Journal Title

      The Annals of Kagoshima University Dental School 23

      Pages: 15-24

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Interisland mutation of a novel phospholipase A_2 from Trimeresurus flavoviridis venom and evolution of Crotalinae group II phospholipases A_22003

    • Author(s)
      Chijiwa, T.et al.
    • Journal Title

      Journal of Molecular Evolution 57

      Pages: 547-554

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular evolution of myotoxic phospholipases A_2 from snake venom2003

    • Author(s)
      Ohno, M.et al.
    • Journal Title

      Toxicon 42

      Pages: 841-854

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Interisland evolution of Trimeresurus flavoviridis venom phospholipase A_2 isozymes2003

    • Author(s)
      Chijiwa, T., Yamaguchi, Y., Ogawa, T., Deshimaru, M., Nobuhisa, I., Nakashima, K., Oda-Ueda, N., Fukumaki, Y., Hattori, S., Ohno, M.
    • Journal Title

      Journal of Molecular Evolution 56

      Pages: 286-293

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Prevention of muscle necrosis induced in rats after envenomation of Trimeresurus flavoviridis (Aamami-Oshima island) venom and Its components, phospholipase A_2 isozymes2003

    • Author(s)
      Kitano, M., Yoshida, A., Hattori, S., Ohno, M.
    • Journal Title

      The Annals of Kagoshima University Dental School 23

      Pages: 15-24

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Necrosis and regeneration of the skeletal muscle without a marked hemorrhage induced in the rat by envenomation of Trimeresurus flavoviridis venom and its components, phospholipase A_2 isozymes2003

    • Author(s)
      Kitano, M., Hirano, M., Ishihara, T., Hashima, T., Umemura, E., Yoshida, A., Hattori, S., Ueda, N., Ohno, M.
    • Journal Title

      The Progress Report of the 2000 and 2001 Survey of the Research Project "Social Homeostasis of Small Islands in an Island Zone" Occasional Papers 38

      Pages: 105-112

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Interisland mutation of a novel phospholipase A_2 from Trimeresurus flavoviridis venom and evolution of Crotalinae group II phospholipases A_22003

    • Author(s)
      Chijiwa, T., Hamai, S., Tsubouchi, S., Ogawa, T., Deshimaru, M., Oda-Ueda, N., Hattori, S., Kihara, H., Tsunasawa, S., Ohno, M.
    • Journal Title

      Journal of Molecular Evolution 57

      Pages: 547-554

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Molecular evolution of myotoxic phospholipases A_22003

    • Author(s)
      Ohno, M., Chijiwa, T., Oda-Ueda, N., Ogawa, T., Hattori, S.
    • Journal Title

      Toxicon 42

      Pages: 841-854

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] ハブ毒を科学する.多様な生理機能と加速進化2003

    • Author(s)
      上田直子, 千々岩崇仁, 大野素徳
    • Journal Title

      化学と生物 42

      Pages: 687-693

    • NAID

      10016520015

    • Related Report
      2004 Annual Research Report
  • [Publications] Chijiwa et al.: "Interisland Evolution of Trimeresurus flavoviridis Venom Phospholipase A_2 Isozymes"Journal of Molecular Evolution. 56. 286-293 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] CHijiwa et al.: "Interisland Mutation of a Novel Phospholipse A_2 from Trimeressurus flavoviridis Venom and Evolution of Crotalinae Group II Phospholipases A_2"Journal of Molecular Evolution. 57. 546-554 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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