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Restoring DNA replication fork arrest within G-rich repetitive sequences by UP1 protein

Research Project

Project/Area Number 15570131
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Functional biochemistry
Research InstitutionNational Cancer Center (Research Institute)

Principal Investigator

FUKUDA Hirokazu  National Cancer Center (Research Institute), Biochemistry Division, Section Head, 生化学部酵素化学研究室, 室長 (60300943)

Co-Investigator(Kenkyū-buntansha) NAKAGAMA Hitoshi  National Cancer Center (Research Institute), Biochemistry Division, Chief, 生化学部, 部長 (30198030)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,700,000 (Direct Cost: ¥3,700,000)
Fiscal Year 2004: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2003: ¥2,300,000 (Direct Cost: ¥2,300,000)
KeywordsRepetive Sequences / Ouadruplex DNA / DNA Replication Fork / Minisatellite / Genomic Instability / Telomere / テロメア / ミニサテライ / 繰返しDNA
Research Abstract

DNA replication arrest at (CAGGG)n on a template plasmid could not been detected in an SV40 cell-free DNA replication system using extracts from 293 cells. It is possible that UP1 protein, a member of RecQ helicase family proteins, or any other factors in the extracts restored the replication arrest. It will be necessary to carry out similar experiments using extracts from the cells in which these factors are deficient or knocked down. There was no difference of the number of CGG repeat and chromosomal breaks between UP1-knocked-down HeLa cells and control cells. It is possible that leaky expression of UP1 or other UP1-like proteins compensated for the decrease in the amount of UP1 proteins. In order to clarify the functions of the hnRNP A3 protein, which was identified as another CAGGG repeat binding protein, we purified a recombinant protein from E.coli and examined the sequence-specificity of its DNA-binding. hnRNP A3 protein bound to d(CAGGG)n with a high affinity, and to telomeric d(TTAGGG)n repeats with a much higher affinity. In an in vitro DNA replication system using purified DNA polymerase and single-stranded DNA templates carrying (CAGGG)n or (TTAGGG)n repeats, hnRNP A3 proteins had an inhibitory effect on DNA synthesis within the repeats, contrary to UP1. hnRNP A3 protein was demonstrated in vitro to protect TTAGGG repeat from an attack of nucleases. We are now elucidating the effect of over-expression of hnRNP A3 on telomere-length in tet-on HeLa cells.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (7 results)

All 2005 2004 Other

All Journal Article (6 results) Publications (1 results)

  • [Journal Article] Up-regulation of hnRNP Al gene in sporadic human colorectal cancers2005

    • Author(s)
      Ushigome M 他6名
    • Journal Title

      International Journal of Oncology 26

      Pages: 635-640

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Up-regulation of hnRNP Al gene in sporadic human colorectal cancers2005

    • Author(s)
      Ushigome, M. et al.
    • Journal Title

      International Journal of Oncology 26

      Pages: 635-640

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Up-regulation of hnRNP A1 gene in sporadic human colorectal cancers2005

    • Author(s)
      Ushigome M 他6名
    • Journal Title

      International Journal of Oncology 26

      Pages: 635-640

    • Related Report
      2004 Annual Research Report
  • [Journal Article] LRP130, a single-stranded DNA/RNA-binding protein, localizes at the outer nuclear e and endoplasmic reticulum membrane, and interacts with mRNA in vivo2004

    • Author(s)
      Tsuchiya N 他5名
    • Journal Title

      Biochemical and Biophysical Research Communications 317

      Pages: 736-743

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] LRP130,a single-stranded DNA/RNA-binding protein, localizes at the outer nuclear and endoplasmic reticulum membrane, and interacts with mRNA in vivo.2004

    • Author(s)
      Tsuchiya, N. et al.
    • Journal Title

      Biochemical and Biophysical Research Communications 317

      Pages: 736-743

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] LRP130, a single-stranded DNA/RNA-binding protein, localizes at the outer nuclear and endoplasmic reticulum membrane, and interacts with mRNA in vivo2004

    • Author(s)
      Tsuchiya N 他5名
    • Journal Title

      Biochemical and Biophysical Research Communications 317

      Pages: 736-743

    • Related Report
      2004 Annual Research Report
  • [Publications] Hirokazu Fukuda: "DNA-binding activity of p100, a transcriptional coactivator, to single-stranded C-rich sequences"Proc.Japan Acad.. 79(B). 120-123 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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