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Analysis of the gene network patterning the hindhtain in vertebrates.

Research Project

Project/Area Number 15570170
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Developmental biology
Research InstitutionSaitama University

Principal Investigator

YAMASU Kyo  Saitama University, Faculty of Science, Associate Professor, 理学部, 助教授 (60230439)

Co-Investigator(Kenkyū-buntansha) NIKAIDO Masataka  Saitama University, Faculty of Science, Assistant Professor, 理学部, 助手 (70344950)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,100,000 (Direct Cost: ¥3,100,000)
Fiscal Year 2004: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 2003: ¥1,600,000 (Direct Cost: ¥1,600,000)
Keywordsanimal development / brain formation / transcriptional regulation / vertebrate / anteroposterior axis / promoter analysis / zebrafish / mutant screening
Research Abstract

1.During the formation of hindbrain in zebrafish embryos, hoxb1b is expressed in the neural plate with its anterior boundary at the r3-r4 border, providing the positional information. In order to know the regulatory mechanism of hoxb1b transcription, I conducted the promoter analysis using gene transfer with GFP as a reporter. As a result, two regulatory regions were identified in the upstream DNA (-1.8 and -4.6 kb) which drove the GFP expression at late stages (somitogenesis) and two regulatory regions in the downstream DNA (+1.5 and +4.7) that drove GFP at earlier stages (gastrula). It also became clear that the downstream two regions mediate the responsiveness to retinoic acid that is known to pattern the hindbrain in vertebrate embryos.
2.gbx2 and fgf8 are both expressed in the primordial anterior hindbrain of the early neural plate and pattern the midbrain-hindbrain boundary region (MHB). I conducted the promoter analyses as for hoxb1b. For gbx2, the upstream region at -6.9 kb was shown to be sufficient for transcription in the anterior hindbrain and diencephalon, while two downstream regions of fgf8 at +10.6 and +15.1 kb could drive reporter expression in the anterior hindbrain in addition to the otic vesicle and optic stalk. Additional regulatory regions have also been identified in the flanking region of fgf8 that drove expression in a number of embryonic regions where fgf8 is expressed in embryos.
3.In order to identify regulatory genes that govern the brain formation without any bias, progeny fish of ENU-treated male fish were screened for anomalies in the embryonic brain as a pilot experiment, leading to establishment of several mutant lines showing abnormal phenotypes such as in the midbrain, dorsal diencephalon, and axis formation.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (14 results)

All 2005 2003 Other

All Journal Article (9 results) Book (1 results) Publications (4 results)

  • [Journal Article] Principles of Developmental Biology (by F. H. Wilts & S. C. Hake., W. W. Norton & Company, 2004)(Translation)2005

    • Author(s)
      Akasaka, Osumi, Yasugi (Part of translation by K. Yamasu)
    • Journal Title

      Tokyo Kagaku Dojin

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Principles of Developmental Biology (by F. H. Wilts & S. C. Hake., W. W. Norton & Company, 2004)(Translation)2005

    • Author(s)
      Akasaka, Osumi, and Yasugi (Part of translation by K. Yamasu)
    • Journal Title

      Tokyo Kagaku Dojin

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] gbx2 homeobox gene is required for the maintenance of the isthmic region in the zebrafish embryonic brain.2003

    • Author(s)
      H.Kikuta, M.Kanai, Y.Ito, K.Yamasu
    • Journal Title

      Developmental Dynamics 228

      Pages: 433-450

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of the upstream region that regulates the transcription of the gene for the precursor to EGF-related peptides, exogastrula-inducing peptides, of the sea urchin Anthocidaris crassispina.2003

    • Author(s)
      K.Horii, G.Suzuki, T.Suyemitsu, K.Yamasu
    • Journal Title

      Comparative Biochemistry and Physiology Part B Biochemistry and Molecular. Biology. 136

      Pages: 15-26

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Structure of the zebrafish fasciclin I-related extracellular matrix protein(βig-h3) and its characteristic expression during embryogenesis.2003

    • Author(s)
      Y.Hirate, H.Okamoto, K.Yamasu
    • Journal Title

      Gene Expression Patterns 3

      Pages: 331-336

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Function of a sea urchin egg Src family kinase in initiating Ca^<2+> release at fertilization.2003

    • Author(s)
      A.F.Giusti, F.J.O'Neill, K.Yamasu, K.R.Foltz, L.A.Jaffe
    • Journal Title

      Developmental Biology 256

      Pages: 367-378

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of the upstream region that regulates the transcription of the gene for the precursor to EGF-related peptides, exogastrula-inducing peptides, of the sea urchin Anthocidaris crassispina.2003

    • Author(s)
      K.Horii, G.Suzuki, T.Suyemitsu, K.Yamasu
    • Journal Title

      Comparative Biochemistry and Physiology Part B Biochemistry and Molecular.Biology. 136

      Pages: 15-26

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Structure of the zebrafish fasciclin I-related extracellular matrix protein (βig-h3) and its characteristic expression during embryogenesis.2003

    • Author(s)
      Y.Hirate, H.Okamoto, K.Yamasu
    • Journal Title

      Gene Expression Patterns 3

      Pages: 331-336

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Function of a sea urchin egg src family kinase in initiating Ca^<2+> release at fertilization.2003

    • Author(s)
      A.F.Giusti, F.J.O'Neill, K.Yamasu.K.R.Foltz, L.A.Jaffe
    • Journal Title

      Developmental Biology 256

      Pages: 367-378

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Principles of Developmental Biology2005

    • Author(s)
      F.H.Wilt, S.C.Hake(赤坂, 大隈, 八杉監訳, 弥益分担訳)
    • Publisher
      W.W.Norton & Company(東京化学同人)(印刷中)
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] H.Kikuta, M.Kanai, Y.Ito, K.Yamasu: "gbx2 homeobox gene is required for the maintenance of the isthmic region in the zebrafish embryonic brain."Developmental Dynamics. 228. 433-450 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] K.Horii, G.Suzuki, T.Suyemitsu, K.Yamasu: "Characterization of the upstream region that regulates the transcription of the gene for the precursor to EGF-related peptides, exogastrula-inducing peptides, of the sea urchin Anthocidaris crassispina."Comparative Biochemistry and Physiology Part B Biochemistry and Molecular.Biology.. 136. 15-26 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Y.Hirate, H.Okamoto, K.Yamasu: "Structure of the zebrafish fasciclin I-related extracellular matrix protein (big-h3) and its characteristic expression during embryogenesis."Gene Expression Pattrns. 3. 331-336 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.F.Giusti, F.J.O'Neill, K.Yamasu, K.R.Foltz, L.A.Jaffe: "Function of a sea urchin egg src family kinase in initiating Ca^<2+> release at fertilization."Developmental Biology. 256. 367-378 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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