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Characterization of the metal binding site of rhamnogalacturonan II from plant cell walls

Research Project

Project/Area Number 15580053
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant nutrition/Soil science
Research InstitutionNational Agriculture and Bio-oriented Research Organization

Principal Investigator

MATSUNAGA Toshiro  National Agricultural Research Center for Kyushu Okinawa Region, Chief, 生物系特定産業技術研究機構・九州沖縄農業研究センター, 研究室長 (20355647)

Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2004: ¥600,000 (Direct Cost: ¥600,000)
Fiscal Year 2003: ¥800,000 (Direct Cost: ¥800,000)
Keywordsrhamnogalacturonan II / lanthanoid / size-exclusion HPLC / ICP-MS / plant cell-wall polysaccharide / boron
Research Abstract

Rhamnogalacturonan II (RG-II) is a structurally complex pectic polysaccharide isolated from vascular plant cell walls, and is composed of a backbone of galacturonic acid (GalA) residues and four side chains of diverse glycosyl residues. Recently, a dimeric RG-II - borate complex (dRG-II-B) in which a borate-diol ester (1:2) cross-links two monomeric RG-II (mRG-II) was isolated from pectinase digests of plant cell walls. It has been shown that RG-II is covalently linked to homogalacturonan, a major component of pectin in plant cell walls, and that dRG-II-B formation contributes to stabilization of the cell walls. These studies have demonstrated that the primary function of boron, an essential microelement for plants, is to covalently cross-link wall pectin by dRG-II-B formation, and thereby to contribute to the strength and integrity of the cell walls. The dRG-II-B complex contains specific metals, such as Ca, Sr, Ba, and Pb. However, the function of metal ions bound to dRG-II-B has not … More been established. In the present study, the metal contents of RG-II and its partial hydrolysates that were treated with metal ions were determined by size-exclusion high-performance liquid chromatography / inductively coupled plasma mass spectrometry (SE-HPLC/ICP-MS) to understand the RG-II's affinity and binding site for metals.
The partially hydrolyzed mRG-II (sugar beet and red wine) was treated with La^<3+>, and then analyzed by SE-HPLC/RI and SE-HPLC/ICP-MS to determine the contribution of each side chain of mRG-II to form a lanthanoid binding site. The amount and molecular weight of the mRG-II major peak gradually decreased with intensification of the hydrolysis treatment, which accompanied a decrease in the amount of La bound to the major peak. In the lower molecular weight region, no mRG-II fragment complexed with La was observed. These results indicate that the La binding site in mRG-II can be attributed not to a single glycosyl residue and side chain, but to an assembly of side chains and a GalA backbone. Less

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (15 results)

All 2005 2004 2003 Other

All Journal Article (12 results) Publications (3 results)

  • [Journal Article] Effects of boron deficiency in cell suspension cultures of Populus alba L.2005

    • Author(s)
      K.Kakegawa, T.Ishii, T.Matsunaga
    • Journal Title

      Plant Cell Rep. 23

      Pages: 573-578

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] 植物におけるホウ素必須性の機構と進化的起源2005

    • Author(s)
      松永俊朗, 石井忠
    • Journal Title

      日本土壌肥料学雑誌 76

      Pages: 223-228

    • NAID

      110004734813

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Mechanism and evolutionary origin of boron essentiality in plants2005

    • Author(s)
      T.Matsunaga, T.Ishii
    • Journal Title

      Jpn.J.Soil Sci.Plant Nutr. 76

      Pages: 223-228

    • NAID

      110004734813

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 植物におけるホウ素必須性の機構と進化的起源2005

    • Author(s)
      松永俊朗, 石井忠
    • Journal Title

      日本土壌肥料学雑誌 76(印刷中)

    • NAID

      110004734813

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Occurrence of the primary cell wall polysaccharide rhamnogalacturonan II in pteridophytes, lycophytes, and bryophytes : Implications for the evolution of vascular plants.2004

    • Author(s)
      T.Matsunaga, T.Ishii, S.Matsumoto, M.Higuchi, A.Darvill, P.Albersheim, M.A.O'Neill
    • Journal Title

      Plant Physiol. 134

      Pages: 339-351

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of metal binding properties of rhamnogalacturonan II from plant cell walls by size-exclusion HPLC/ICP-MS2004

    • Author(s)
      T.Matsunaga, T.Ishii
    • Journal Title

      Anal.Sci. 20

      Pages: 1389-1393

    • NAID

      10013657249

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] ホウ素による植物細胞壁構造の安定化2004

    • Author(s)
      松永俊朗, 石井忠
    • Journal Title

      植調 38

      Pages: 343-352

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Occurrence of the primary cell wall polysaccharide Rhamnogalacturonan II in pteridophytes, lycophytes, and bryophytes: Implications for the evolution of vascular plants2004

    • Author(s)
      T.Matsunaga, T.Ishii, S.Matsumoto, M.Higuchi, A.Darvill, P.Albersheim, M.A.O'Neill
    • Journal Title

      Plant Physiol. 134

      Pages: 339-351

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of metal binding properties of Rhamnogalacturonan II from plant cell walls by size-exclusion HPLC/ICP-MS2004

    • Author(s)
      T.Matsunaga, T.Ishii
    • Journal Title

      Anal.Sci. 20

      Pages: 1389-1393

    • NAID

      10013657249

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 植物体内でのホウ素の化学形態と動態・機能2003

    • Author(s)
      松永俊朗, 石井忠
    • Journal Title

      季刊肥料 96

      Pages: 64-70

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 植物細胞壁形成におけるペクチン多糖ラムノガラクツロナンII-ホウ酸複合体の機能2003

    • Author(s)
      石井忠, 松永俊朗
    • Journal Title

      Cellulose Commun. 10

      Pages: 160-164

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Function of rhamnogalacturonan II - borate complex in plant cell wall formation2003

    • Author(s)
      T.Ishii, T.Matsunaga
    • Journal Title

      Cellulose Commun. 10

      Pages: 160-164

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] 松永俊朗, 石井忠: "植物体内でのホウ素の化学形態と動態・機能"季刊肥料. 96. 64-70 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 石井忠, 松永俊朗: "植物細胞壁形成におけるペクチン多糖ラムノガラクツロナンII-ホウ酸複合体の機能"Cellulose Commun.. 10(4). 160-164 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] T.Matsunaga, T.Ishii, S.Matsumoto, M.Higuchi, A.Darvill, P.Albersheim, M.A.O'Neill: "Occurrence of the primary cell wall polysaccharide rhamnogalacturonan II in pteridophytes, lycophytes, and bryophytes : Implications for the evolution of vascular plants."Plan Physiol.. 134. 339-351 (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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