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Studies on biosynthesis, biodegradation, and regulation mechanism γ-polyglutamic acid in Bacillus subtilis

Research Project

Project/Area Number 15580058
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Applied microbiology
Research InstitutionShizuoka university

Principal Investigator

TAHARA Yasutaka  Shizuoka univ., Agriculture, professor, 農学部, 教授 (30022320)

Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,800,000 (Direct Cost: ¥3,800,000)
Fiscal Year 2004: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2003: ¥2,500,000 (Direct Cost: ¥2,500,000)
Keywordsnatto / Bacillus subtilis / γ-polyglutamic acid / PGA-degrading enzyme / gene disruption / glutamate racemase / γ-glutamyltranspeptidase / endo-L-glutamylhydrolase / γ-gultamyltranspeptidase / end-γ-glutamylhydrolase / carboxypeptidase G / 合成オリゴPGA / Bucillus subtilis / PGAオペロン / PGA合成酵素 / ywtB / ywtB破壊株 / ywtB復帰株
Research Abstract

Among PGA operon (ywsC-ywtABC) involved in γ-polyglutamic acid biosynthesis in Bacillus subtilis, no production of PGA was observed in ΔywsC and ΔywtA strains, but ΔywtB strain producing a small amount of PGA with 100% L-Glu. However, the ΔywtB revertant produced PGA with 70 : 30 in ratio of D, L-Glu, which is same to that of the wild-type. There are two glutamate racemases, GIr and YrpC, in B. subtilis, of which the genes were disrupted in an attempt to make clear determination of D, L-glutamate in PGA. ΔywtB-ΔgIr-ΔyrpC strain produced PGA with only L-Glu as well as that of the wild type. These results, together with the fact that the purified YwsC is able to biosynthesizes ^<14>C-PGA only from ^<14>C-L-glutamate under presence of ATP and Mg^<2+>, suggest that YwtB should possess the activity of glutamate racemase for producing PGA heterogeneous with D, L-glutamate.
The structure of γ-polyglutamate-hydrolyzed product (F2) having about 2 kDa in molecular mass with D-glutamate and L-glutamate in an 80 : 20 ratio released by YwtD of B. subtilis was analyzed using γ-glutamyltranspeptidase, rat γ-glutamyl hydrolase and carboxypeptidase G. The analysis of the digested products showed the F2 product is an optically heterogeneous polymer consisting of D-γ-glutamate and L-γ-glutamate peptide units with D-glutamate in both sides, suggesting that the YwtD should be an unique endopeptidase that cleaves γ-glutamyl bond between D-and D-glutamate recognizing adjacent L-glutamate in the N-terminal side.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (7 results)

All 2003 Other

All Journal Article (5 results) Publications (2 results)

  • [Journal Article] Characterization of the Bacillus subtilis YwtD gene, whose product is involved in γ-polyglutamic acid degbradation2003

    • Author(s)
      Suzuki, T., Tahara, Y.
    • Journal Title

      J.Bacteriol. 185

      Pages: 2379-2382

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] γ-ポリグルタミン酸の合成酵素と分解酵素の構造と機能2003

    • Author(s)
      田原康孝
    • Journal Title

      酵素工学ニュース 50

      Pages: 6-13

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Structure and function of enzumes involved in biosynthesis and biodegradation of γ-polyglutamic acid in Bacillus subtilis2003

    • Author(s)
      Tahara, Y.
    • Journal Title

      Enzyme Engineering News (in Japanese) 50

      Pages: 6-13

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of γ-polyglutamic acid degradation by mammalian γ-glutamytranspeptidase

    • Author(s)
      Y.Tahara et al.
    • Journal Title

      FEMS Microbiol.Lett. (発表予定)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Structural studies on γ-polyglutamate-hydrolyzed product (F2) released by YwtD of Bacillus subtilis

    • Author(s)
      Y.Tahara et al.
    • Journal Title

      J.Bacteriol. (発表予定)

    • Related Report
      2004 Annual Research Report
  • [Publications] Y.Tahara et al.: "Production of γ-L-Polyglutamic Acid by Bacillus subtilis Mutant Defective in ywtB Gene Involved in Polyglutamic Acid Biosynthesis"Biosci.Biotechnol.Biochem.. (発表予定).

    • Related Report
      2003 Annual Research Report
  • [Publications] Y.Tahara et al.: "Structural Studies on γ-Polyglutamate-Hydrolyzed Product Released by YwtD of Bacillus subtilis"J.Bacteriol.. (発表予定).

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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