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Development of a novel thermodynamical model for sinoatrial node pacemaker cells and bifurcation analysis of the model systems in terms of nonlinear dynamics.

Research Project

Project/Area Number 15590195
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General physiology
Research InstitutionKANAZAWA MEDICAL UNIVERSITY

Principal Investigator

KURATA Yasutaka  Kanazawa Medical University, Associate Professor, 医学部, 助教授 (00267725)

Co-Investigator(Kenkyū-buntansha) SHIBAMOTO Toshishige  Kanazawa Medical University, Professor, 医学部, 教授 (90178921)
OGURA Toshitsugu  Kanazawa Medical University, Associate Professor, 医学部, 講師 (10329378)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥2,300,000 (Direct Cost: ¥2,300,000)
Fiscal Year 2004: ¥1,000,000 (Direct Cost: ¥1,000,000)
Fiscal Year 2003: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywordssinoatrial node / ionic channels / ion transporters / nonlinear dynamical systems / Markovian state models / rate theory / computer simulations / bifurcation analysis
Research Abstract

On the basis of our classical Hodgkin-Huxley type model, we have first developed a novel thermodynamical model for sinoatrial node cells. For the development of the novel model, gating kinetics of ionic channels and dynamics of ion transports by Na^+-K^+ pump and Na^+/Ca^<2+> exchangers were described by time-homogeneous Markovian state models with state transition rate constants being formulated with single exponential functions based on Eyring's absolute reaction rate theory. Furthermore, the dynamics of binding and unbinding of antiarrhythmic drugs were incorporated to the base model. We have also developed the methods and computer programs to investigate bifurcation structures of model systems during changes in parameters. Based on bifurcation theory, we calculated equilibrium points, their stability, and dynamics of limit cycles. Exploring bifurcation structures of model systems allowed us to validate the mathematical models more accurately as well as to elucidate the dynamical me … More chanisms of pacemaker generation.
To validate the novel model as well as the classical model, we simulated spontaneous action potentials and ionic current dynamics, and also experimentally examined the effects of antiarrhythmic agents to block L-type Ca^<2+> (I_<Ca,L>) and delayed-rectifier K^+ (I_<Kr>) currents on SA node pacemaking. Moreover, we explored bifurcation structures of model cells during inhibitions of I_<Ca,L> or I_<Kr> by constructing bifurcation diagrams. Our findings are summarized as follows : 1)The novel model is superior to the classical model in mimicking the action potential change during I_<Kr> inhibition. 2)In both the models, blocking I_<Ca,L> or I_<Kr> caused cessation of pacemaker activity via a Hopf bifurcation where an EP was stabilized, suggesting that bifurcation structures of the model systems during I_<Ca,L> or I_<Kr> inhibitions are essentially the same. It was suggested that a classical Hodgkin-Huxley type model is still useful in exploring the mechanisms of pacemaker generation, and can be used for constructing whole heart models. Less

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (5 results)

All 2005 2003 Other

All Journal Article (4 results) Publications (1 results)

  • [Journal Article] Dynamical mechanisms of pacemaker generation in I_<KI>-downregulated human ventricular myocytes : insights from bifurcation analyses of a mathematical model2005

    • Author(s)
      Kurata Y, et al.
    • Journal Title

      Biophys J 89・4

      Pages: 2865-2887

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Dynamical mechanisms of pacemaker generation in I_<K1>-downregulated human ventricular myocytes : insights from bifurcation analyses of a mathematical model.2005

    • Author(s)
      Kurata Y, Hisatome I, Matsuda H, Shibamoto T.
    • Journal Title

      Biophys J 89(4)

      Pages: 2865-2887

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Roles of L-type Ca^<2+> and delayed-rectifier K^+ currents in sinoatrial node pacemaking : insights from stability and bifurcation analyses of a mathematical model2003

    • Author(s)
      Kurata Y, et al.
    • Journal Title

      Am J Physiol Heart Circ Physiol 285・6

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Roles of L-type Ca^<2+> and delayed-rectifier K^+ currents in sinoatrial node pacemaking : insights from stability and bifurcation analyses of a mathematical model.2003

    • Author(s)
      Kurata Y, Hisatome I, Imanishi S, Shibamoto T.
    • Journal Title

      Am J Physiol Heart Circ Physiol 285(6)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Kurata Y, et al.: "Roles of L-type Ca^<2+> delayed-rectifier K^+ currents in sinoatrial node pacemaking : insights from stability and bifurcation analyses of a mathematical model"Am J Physiol Heart Circ Physiol. 285. H2804-H2819 (2003)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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