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Roles of APGubiquitylation-like modification during differentiation and maintenance of neuronal cells.

Research Project

Project/Area Number 15590254
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field General medical chemistry
Research InstitutionJUNTENDO UNIVERSITY

Principal Investigator

ISEI Tanida  JUNTENDO UNIVERSITY, SCHOOL OF MEDICINE, DEPARTMENT OF BIOCHEMISTRY, ASSISTANT PROFESSOR, 医学部, 講師 (30296868)

Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2004: ¥1,700,000 (Direct Cost: ¥1,700,000)
Fiscal Year 2003: ¥1,800,000 (Direct Cost: ¥1,800,000)
KeywordsAUTOPHAGY / UBIQUITYLATION-LIKE / ATG / APG gene / MAP-LC3 / GABARAP / GATE-16 / 3rd Cell Death / DIFFERENTIATION TO NEURON / タンパク質分解 / APG10 / ATG10 / APG7 / ATG7 / APG遣伝子
Research Abstract

ATG-ubiquitylation-like modification is essential for autophagy in yeast, plant, and mammals. ATG7 is a key enzyme essential for the reaction. We generated a conditional knock-out mouse of ATG7 Mouse liver lacking Atg7 resulted in a severe hepatomegaly with inflammation, leading to a loss of viability under starvation. During generating the conditional mouse, we showed that human Atg4B is an unique cysteine protease for carboxyl cleavage of LC, GABARAP, and GATE-16, and is delipidating enzyme for LC3-and GABARAP-phospholipid conjugate. Furthermore, we showed that human LC3 is an authentic modifier mediated by human Atg7 and Atg3. We also found a novel Ufml Ubl-modification system in mammals. In addition, we investigated several aspects of ATG-conjugation systems; Strauctural analysis of LC3 by NMR, Role of Rab7 in autophagy, and tissue-distribution of modified forms of LC3, GABARAP, and GATE-16. Now, we are generating a brain-specific ATG7-knockout mouse that will be a definitive tool for analyses of relations between autophagy and neurodegenerative diseases

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (32 results)

All 2005 2004 Other

All Journal Article (22 results) Book (2 results) Publications (8 results)

  • [Journal Article] Lysosomal turnover, but not a cellular level, of endogenous LC3 is a marker for autophagy.2005

    • Author(s)
      Tanida et al.
    • Journal Title

      Autophagy (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice2005

    • Author(s)
      Komatsu et al.
    • Journal Title

      Journal of Cell Biology (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Solution structure of microtubule-associated protein light chain 3 and identification of its functional subdomains2005

    • Author(s)
      Kouno et al.
    • Journal Title

      Journal of Biological Chemistry (In press)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Lysosomal turnover, but not a cellular level, of endogenous LC3 is a marker for autophagy.2005

    • Author(s)
      Tanida et al.
    • Journal Title

      Autophagy (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice2005

    • Author(s)
      Komatsu et al.
    • Journal Title

      Journal of Cell Bioligy (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Solution structure of microtubule-associated protein light chain 3 and identification of its functional subdomains2005

    • Author(s)
      Kouno et al.
    • Journal Title

      Journal of Biological Chemistry (in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] HsAtg4B/HsApg4B/autophagin-1 cleaves the carboxyl termini of three human Atg8 homologues and delipidates microtubule-associated protein light chain 3- and GABA_A receptor-associated protein-phospholipid conjugates.2004

    • Author(s)
      Tanida et al.
    • Journal Title

      Journal of Biological Chemistry 279・35

      Pages: 36268-36276

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Role for Rab7 in maturation of late autophagic Vacuoles2004

    • Author(s)
      Jager et al.
    • Journal Title

      Journal of Cell Science 117・20

      Pages: 4837-4848

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Human LC3/MAP1LC3B is cleaved at its carboxyl terminal Met^<121> to expose Gly^<120> for lipidation and targeting to autophagosomal membranes.2004

    • Author(s)
      Tanida et al.
    • Journal Title

      Journal of Biological Chemistry 279・46

      Pages: 47704-47710

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] ^1H,^<13>C, and ^<15>N resonance assignments of human microtubule-associated protein light chain-3.2004

    • Author(s)
      Kouno et al.
    • Journal Title

      Journal of Biomolecular NMR 29・3

      Pages: 415-416

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] LC3 conjugation system in mammalian autophagy2004

    • Author(s)
      Tanida et al.
    • Journal Title

      International Journal of Biochemistry and Cell Biology 36・12

      Pages: 2503-2518

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] novel protein-conjugating system for Ufm1, a ubiquitin-fold modifier2004

    • Author(s)
      Komatsu et al.
    • Journal Title

      EMBO Journal 23・9

      Pages: 1977-1986

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] HsAtg4B/HsApg4B/autophagin-1 cleaves the carboxyl termini of three human Atg8 homologues and delipidates microtubule-associated protein light chain 3- and GABA_A receptor-associated protein-phospholipid conjugates.2004

    • Author(s)
      Tanida et al.
    • Journal Title

      Journal of Biological Chemistry 279/35

      Pages: 36268-36276

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Role for Rab7 in maturation of late autophagic vacuoles2004

    • Author(s)
      Jager et al.
    • Journal Title

      Journal of Cell Science 117/20

      Pages: 4837-4848

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Human LC3/MAP1LC3B is cleaved at its carboxyl terminal Met^<121> to expose Gly^<120> for lipidation and targeting to autophagosomal membranes.2004

    • Author(s)
      Tanida et al.
    • Journal Title

      Journal of Biological Chemistry 279/46

      Pages: 47704-47710

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] ^1H, ^<13>C, and ^<15>N resonance assignments of human microtubule-associated protein light chain-3.2004

    • Author(s)
      Kouno et al.
    • Journal Title

      Journal of Biomolecular NMR 29/3

      Pages: 415-416

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] LC3 conjugation system in mammalian autophagy2004

    • Author(s)
      Tanida et al.
    • Journal Title

      International Jurnal of Biochemistry and Cell Biology 36/12

      Pages: 2503-2518

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] novel protein-conjugating system for Ufml, a ubiquitin-fold modifier.2004

    • Author(s)
      Komatsu et al.
    • Journal Title

      EMBO Journal 23/9

      Pages: 1977-1986

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Chapter 22: Autophagy and Neuromuscular Diseases2004

    • Author(s)
      Ueno et al.
    • Journal Title

      Autophagy, LANDES BIOSCIENCE (Klionsky Eds) Chapter 22

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Role for Rab7 in maturation of late autophagic vacuoles2004

    • Author(s)
      Jager et al.
    • Journal Title

      Journal of Cell Science 117・20

      Pages: 4837-4848

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Human LC3/MAP1LC3B is cleaved at its carboxyl terminal Met^<121> to expose Gly^<120> for lipidation and targeting to autophagosomal membranes2004

    • Author(s)
      Tanida et al.
    • Journal Title

      Journal of Biological Chemistry 279・46

      Pages: 47704-47710

    • Related Report
      2004 Annual Research Report
  • [Journal Article] ^1H, ^<13>C, and ^<15>N resonance assignments of human microtubule-associated protein light chain-3.2004

    • Author(s)
      Kouno et al.
    • Journal Title

      Journal of Biomolecular NMR 29・3

      Pages: 415-416

    • Related Report
      2004 Annual Research Report
  • [Book] Autophagy(Chapter 22 : Autophagy and Neuromuscular Diseases)2004

    • Author(s)
      Ueno et al.(Klionsky Eds)
    • Total Pages
      309
    • Publisher
      LANDES BIOSCIENCE
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Book] Autophagy (Chapter 22: Autophagy and Neuromuscular Diseases)2004

    • Author(s)
      Ueno et al.(Klionsky Eds)
    • Total Pages
      309
    • Publisher
      LANDES BIOSCIENCE
    • Related Report
      2004 Annual Research Report
  • [Publications] Tanida, I., Komatsu, M., Ueno, T., Kominami, E.: "GATE-16 and GABARAP are authentic modifiers mediated by Apg7 and Apg3."Biochemical and Biophysical Research Communications. 300. 637-644 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Yamazaki-Sato H, Tanida I, Ueno T, Kominami E: "The carboxyl terminal 17 amino acids within Apg7 are essential for Apg8 lipidation, but not for Apg12 conjugation."FEBS Letters. 551. 71-77 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nemoto T, Tanida I, Tanida-Miyake E, Minematsu-Ikeguchi N, Yokota M, Ohsumi M, Ueno T, Kominami E.: "The mouse APG10 homologue, an E2-like enzyme for Apg12p conjugation, facilitates MAP-LC3 modification."Journal of Biological Chemistry. 278. 39517-39526 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Asanuma K, Tanida I, Shirato I, Ueno T, Takahara H, Nishitani T, Kominami E, Tomino Y: "MAP-LC3, a promising autophagosomal marker, is processed during the differentiation and recovery of podocytes from PAN nephrosis."FASEB Journal. 17. 1165-1167 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 谷田 以誠, 木南 英紀: "オートファジーにおけるApg7タンパク質活性化酵素"生体の科学. 54. 521-527 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 谷田 以誠: "腎障害とLC3ユビキチン様修飾"実験医学. 22. 311-318 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Tanida, I., Ueno, T., Kominami, E.: "LC3 conjugation system in mammalian autophagy"International Journal of Boichemistry and Cell Bioligy. in press. (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ueno.T,.Tanida.I., Kominami, E.: ""Autophagy and Nueromuscular Disease" in Autophagy, Klionsky, D.J.Eds."Eurekah.com Landes Bioscience. 264-286 out of 311 (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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