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Improvement of ISH method for the detection of rare mRNAs in pathology archival tissues and establishment of its standard evaluation method

Research Project

Project/Area Number 15590315
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Human pathology
Research InstitutionKitasato University

Principal Investigator

SATO Yuichi  Kitasato University, School of Allied Health Sciences, Associate Professor, 医療衛生学部, 助教授 (30178793)

Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2005: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2004: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2003: ¥1,300,000 (Direct Cost: ¥1,300,000)
Keywordsin situ hybridization / formalin fixation / paraffin embedding / AMeX fixation / mRNA / beta 2-microglobulin / autocrine motility factor / glioblastoma / rapid ISH法 / insulin / glucagon / 組織マイクロアレイ / β2-microglobulin遺伝子 / 固定法 / 蛋白分解酵素
Research Abstract

The specific protein expression has been semi-quantitatively examined by immunostaining. No in situ hybridization (ISH) method to detect the expression of mRNAs semi-quantitatively has been reported. In this study, to examine the correlation of the fixation conditions and proteinase K treatment, house keeping gene such as beta-2-microglobulin (beta-2M) mRNA was detected by ISH method using one day to 16 days formalin-fixed and paraffin-embedded normal human tissues. As a result, the expression of beta-2M was most preserved in all but heart tissue fixed by formalin for one day. And the expression levels tend to be reduced during elongation of fixation time. Furthermore, optimal proteinase K treatments were different in each tissue that was fixed even if in the same conditions. We also demonstrate that the expression levels of tissue sections that stored at 4 C for a long time were decreased than those in tissue sections just after cutting. To raise detection sensitivity, the rapid ISH method using cRNA probes has been improved. Using this modified method, we were able detect insulin and glucagon mRNAs clearly within three hours. The rapid ISH with cRNA probes could have many applications in various research fields and clinical laboratories. The expressions of autocrine motility factor (AMF) and its receptor gp78 mRNA were detected in formalin-fixed and paraffin-embedded pathology archival high-grade astrocytoma tissues by the highly sensitive ISH method. The positive rate of AMF mRNA was significantly higher than in anaplastic astrocytomas. The overall survival of patients with AMF expression was significantly shorter than patients without AMF expression. In anaplastic astrocytomas, the overall survival of patients with AMF expression was also significantly shorter than patients without AMF expression. This study demonstrated that AMF is a poor prognostic factor in high-grade astrocytomas.

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (12 results)

All 2006 2005 2004 Other

All Journal Article (9 results) Publications (3 results)

  • [Journal Article] A rapid and higyhly sensitive in situ mRNA hybridization method with digoxigenin labeled cRNA probes2006

    • Author(s)
      Sato Y
    • Journal Title

      J Histotechnol 29・2(印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] expression of autocrine motility factor mRNA is a poor prognostic factor in high-grade astrocytoma2006

    • Author(s)
      Tanizaki Y
    • Journal Title

      Pathol Int (印刷中)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 病理組織検体ヲ用いたmRNA in situ hybridization.ホルマリン固定パラフィン包埋標本から遺伝子/発現はどこまで検索できるか?2006

    • Author(s)
      長塩 亮
    • Journal Title

      病理と臨床 24・2

      Pages: 475-181

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A rapid and highly sensitive in situ hybridization method with digoxigenin labeled cRNA probe2006

    • Author(s)
      Sato Y, Tsuchiya B, Nagashio R, Jiang S-X, Okayasu I
    • Journal Title

      J Histotechnol 29(2)(in press)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Expression of autocrine motility factor mRNA is a poor prognostic factor in high-grade astrocytoma2006

    • Author(s)
      Tanizaki Y, Sato Y, Oka H, Utsuki S, Kondo K, Miyajima Y, Nagashio R, Fujii K
    • Journal Title

      Pathol Int (in press)

    • NAID

      10020332156

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A rapid and highly sensitive in situ mRNA hybridization method with digoxigenin labeled cRNA probes2006

    • Author(s)
      Sato, Y
    • Journal Title

      J Histotechnol (印刷中)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Invasive meningioma is associated with a low expression of E-cadherin and β-catenin2005

    • Author(s)
      Utsuki S
    • Journal Title

      Clin Neuropathol 24

      Pages: 8-12

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Specific expression of platelet derived endothelial cell growth factor in submucosa of human colorectal cancer2004

    • Author(s)
      Nozawa, T
    • Journal Title

      Dis Colon Rectum 47

      Pages: 2093-2100

    • Related Report
      2004 Annual Research Report
  • [Journal Article] hASH1 expression is closely correlated with endocrine phenotype and differentiation extent in pulmonary neuroendocrine tumors2004

    • Author(s)
      Jiang, S-X
    • Journal Title

      Mod Pathol 17

      Pages: 222-229

    • Related Report
      2004 Annual Research Report
  • [Publications] Suzuki, T.: "The expression of pancreatic endocrine markers in centioacina cells of the normal and regenerating rat pancreas : then possible transformation to endocrine cells"Arch Histol Crtol. 66(4). 347-358 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Jiang, S-X: "hASH1 expression is closely correlated with endocrine phenotype and differentiation extent in pulmonary neuroendocrine tumors"Hum Pathol. (印刷中). (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nozawa, T.: "Specific expression of platelet-derived endothelial cell growth factor in submucosa of human colorectal cancer."Dis Colon Rectum. (印刷中). (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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