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Development of a method to examine the sensitivity of tissues and bacteria for drugs on the basis of direct and sensitive measurement of the concentration of oxygen

Research Project

Project/Area Number 15590485
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Laboratory medicine
Research InstitutionShiga University of Medical Science

Principal Investigator

ISHIDA Tetsuo  Shiga University of Medical Science, Medical Science, Associate professor, 医学部, 助教授 (10176191)

Co-Investigator(Kenkyū-buntansha) TANAKA Hiroyuki  Shiga University of Medical Science, Medical Science, Assistant professor, 医学部, 助手 (10293820)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,600,000 (Direct Cost: ¥3,600,000)
Fiscal Year 2004: ¥1,400,000 (Direct Cost: ¥1,400,000)
Fiscal Year 2003: ¥2,200,000 (Direct Cost: ¥2,200,000)
Keywordsoxygen measurement / oxygenase / enzyme column / frontal gel chromatography / catechol 2,3-dioxygenase / catechol / perfusion system / micro HPLC / 還流実験 / シリンジポンプ / 酵素の安定化 / 酸素電極
Research Abstract

1.We have developed a system to supply a buffer containing oxygen less than 1 μM. In this system, the oxygen molecules in the buffer contained in a syringe are consumed completely within several seconds by the oxygenation to 4-chlorocatechol (4-CC) catalyzed by catechol 2,3-dioxygenase (Mpc), then the buffer is supplied to a reaction vessel after passing through a column packed with both C18 and strong anion exchange gels which remove the remaining 4-CC and the enzymatic products.
2.Mpc-fixed gels maintaining a high enzyme activity over months have been produced. In the presence of 2-hydroxypyridine N-oxide, a potent competitive inhibitor, Mpc was reacted with TSKgel AF-Tresyl Toyopearl gels to give Mpc-fixed gels : a micro column (1.0 mm×30 mm) packed with the gel showed a sufficient activity to nearly complete the reaction of O_2 with 4-CC at a flow rate of 0.1 ml/min.
3.We have developed a system to supply a buffer containing 0-250 μM O_2. Using two syringe pumps, the air-saturated buffer and the buffer containing no oxygen (see 1.) were mixed in a defined ratio with a T joint. The concentration of O_2 in the buffer eluted from the system was confirmed by an oxygen electrode. Using the trap column only containing anion exchanger, the concentration of O_2 was successfully monitored by a UV-Vis monitor after passing through the micro Mpc column (see 2.).
4.Frontal gel chromatography(FGC) using a 100-μL amount of a protein-ligand mixture has been successfully performed. FGC allows us to obtain the binding curve for the interaction between a protein and ligands. Therefore, the present micro scale FGC opens the way for its application to functional characterization studies in the post-genom era.
5.Crystallization and preliminary X-ray diffraction studies of Mpc-2-HPNO complex have been carried out.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (5 results)

All 2004

All Journal Article (5 results)

  • [Journal Article] Quantitative structure-activity relationship for the cleavage of C3/C4-substituted catechols by a prototypal extradiol catechol dioxygenase with broad substrate specificity2004

    • Author(s)
      Ishida Tetsuo
    • Journal Title

      J.Biochem. 135

      Pages: 721-730

    • NAID

      10016200453

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] 非ヘム2価鉄イオン単核錯体を利用する酵素群:2-His-1-Carboxylate酵素のO_2を利用した多彩な反応2004

    • Author(s)
      石田哲夫
    • Journal Title

      化学と生物 42

      Pages: 430-432

    • NAID

      10016519108

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Quantitative structure-activity relationship for the cleavage of C3/C4-substituted catechols by a prototypal extradiol catechol dioxygenase with a broad substrate specificity.2004

    • Author(s)
      Tetsuo Ishida
    • Journal Title

      J.Biochem. 135

      Pages: 721-730

    • NAID

      10016200453

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Quantitative structure-activity relationship for the cleavage of C3/C4-subsituted catechols by a prototypal extradiol dioxygenase with broad substrate specificity.2004

    • Author(s)
      Ishida Tetsuo
    • Journal Title

      J.Biochem. 135

      Pages: 721-730

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 非ヘム2価鉄イオン単核錯体を利用する酵素群:2-His-1-carboxylate酵素のO_2を利用した多彩な反応2004

    • Author(s)
      石田哲夫
    • Journal Title

      化学と生物 42

      Pages: 430-432

    • NAID

      10016519108

    • Related Report
      2004 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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