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A development of oligonucleotide based DNA array for CYP2C9 genotyping for individual therapy in patients with valve replacement receiving warfarin therapy

Research Project

Project/Area Number 15590768
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Circulatory organs internal medicine
Research InstitutionIwate Medical University

Principal Investigator

NAKAI Kenji  Iwate Medical University, Laboratory Medicine, Associate Professor, 医学部, 助教授 (90146035)

Co-Investigator(Kenkyū-buntansha) IZUMOTO Hirishi  Iwate Medical University, Associate professor, 医学部, 講師 (10265150)
HABANO Wataru  Iwate Medical University, Assistant professor, 医学部, 講師 (50332979)
NAKAI Keiko  Iwate Medical University, Assistant professor, 医学部, 講師 (40227723)
MCRIYA Shogo  Nisshinbo Industries, Inc. Research & Development center, 研究開発センター201G, 主任研究員
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,400,000 (Direct Cost: ¥3,400,000)
Fiscal Year 2004: ¥1,300,000 (Direct Cost: ¥1,300,000)
Fiscal Year 2003: ¥2,100,000 (Direct Cost: ¥2,100,000)
KeywordsSNP / CYP2C9 genotype / anti-coagulation therapy / real-time PCR / OligoArrav / artificial valve replacement / warfarin / CYP2C9 / 個別化医療 / CYP2C9 遺伝子多型 / 薬物療法 / 人工弁 / DNAアレイ
Research Abstract

Title I. The clinical use of oli0onucleotide based DNA array for CYP2C9^*3 and CYP2C9^*2 L'enotvPin2 in patients receiving warfarin therapy
Abstract : The aim of this investigation was to verify the contribution of CYP2C9 single nucleotide polymorphisms (SNPs) in patients receiving warfarin to avoid side effects such as embolic and hemorrhagic events. The subjects consisted of 26 patients with valve replacements (19 aortic valve, 4 mitral valve, 3 aortic and mitral valve), who were receiving warfarin therapy. Genotyping of CYP2C9 gene SNPs was determined using a recently developed OligoARRAY system. The international normalized ratio (PT-1NR) was measured on an auto-analyzer system using ISI value of 1.15. The accuracy of genotyping CYP2C9 [CYP2C9^*2 mutant; C416T (Argl44Cys), CYP2C9^*3 mutant; ALO61C (Ile359Leu)] by the OligoARRAY was verified by direct sequencing. However, no mutant genotypes were found in any of these 26 patients. The PT-FNR values for patients with the wild genotype … More was 1.6 ±0.2 in the AVR group (n='19), 2±0.5 in the MVR group (n4), and 2.2±0.4 in the AVR&MVR group (n=3). The average warfarin dose was 2.8 ± 0.8 mg, 3 ± 0.7 mg, and 2.7±1.3 mg, respectively for these group. In conclusion, the OligoARRAY was found to be convenient for the reliable genotyping of CYP2C9, and has the potential for routine use in the clinic for detecting susceptible individuals prior to warfarin treatment.
Title II. Ethnic differences in CYP2C9^*2 (Ari'l44Cys) and CYP2C9^*3 (lle3S9Leu) 2enotvpes in Japanese and Israeli populations
Abstract : CYP2C9 contributes to the metabolism of a number of clinically important substrate drugs such as warfarin. In the present study, ethnic differences in the CYP2C9^*2 and CYP2C9^*3 allele distribution in Japanese and Israeli populations were evaluated a using newly developed oligonucleotide based DNA array (OligoArray^R). The population studied consisted of 147 Japanese and 388 Israeli donors (100 Ashkenazi Jews, 99 Yemenite Jews, 100 Moroccan Jews and 89 Libyan Jews). The CYP2C9^*2 [Argl44Cys (416 C>T), exon 3] and CYP2C9^*3 (Ile359Leu (1061 A>C), exon 7) genotypes were determined using an OligoArray^R. The frequencies of CYP2C9^*2 genotype (CC/CT+TT) was significantly lower in Japanese (1/0)(OR 0.02), and was higher in Libyan Jews (0.697/0.303) (OR 2.13; 95%CI 1.07-4.24) compared with those in Ashkenazi Jews (0.83/0.17), Yemenite Jews (0.899/0.101), Moroccan Jews (0.81/0.19). The frequencies of CYP2C9^*3 genotype (AA/AC±CC) was significantly lower in Japanese (0.986/0.014)(OR 0.08), and was higher in Libyan Jews (0.652/0.349) (OR 3.03; 95%CI 1.5-6.1) and Moroccan Jews (0.77/0.23)(OR 1.69; 95%CI 0.62-3.48) compaered with those in Ashkenazi Jews (0.83/0.17), Yemenite Jews (0.899/0.101). Thus, the CYP2C9^*2 (Argl44Cys) and CYP2C9^*3 (Ile359Leu) mutant were rare in the Japanese population, and showed different frequencies in the four Jewish ethnic groups examined. Less

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (11 results)

All 2005 2004 2003 Other

All Journal Article (7 results) Patent(Industrial Property Rights) (1 results) Publications (3 results)

  • [Journal Article] Ethnic Difference of Coronary Artery Disease-associated SNPs in Two Israeli Healthy Populations Using MALDI-TOF Mass Spectrometry2004

    • Author(s)
      Nakai K, Habano W, Nakai K, Fukushima N, Fujita T, Gurwitz D
    • Journal Title

      Life Sciences 75

      Pages: 1003-1010

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Clinical Significance Of CYP2C9 Gene Polymorphisms By Rapid Cycle Real-Time PCR In Patients Receiving Warfarin Therapy2004

    • Author(s)
      Nakai K, Izumoto H, Oshima Y, Tsuboi J, Kawazoe K
    • Journal Title

      日本循環器学会誌 68

      Pages: 448-448

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Ethnic Difference of Coronary Artery Disease-associated SNPs in Two Israeli Healthy Populations Using MALDI-TOF Mass Spectrometry.2004

    • Author(s)
      Nakai K, Habano W, Nakai K, Fukushima N, Fujita T, Gurwitz D
    • Journal Title

      Life Sciences 75

      Pages: 1003-1010

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Clinical Significance Of CYP2C9 Gene Polymorphisms By Rapid Cycle Real-Time PCR In Patients Receiving Warfarin Therapy.2004

    • Author(s)
      Nakai; K, Izumoto H, Oshima Y, Tsuboi J, Kawazoe K.
    • Journal Title

      Jpn Circ 68

      Pages: 448-448

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Clinical Significance Of CYP2C9 Gene Polymorphisms By Rapid Cycle Real-Time PCR In Patients Receiving Warfarin Therapy2004

    • Author(s)
      Nakai K, Izumoto H, Oshima Y, Tsuboi T, Kawazoe K
    • Journal Title

      日本循環器学会誌 68

      Pages: 448-448

    • Related Report
      2004 Annual Research Report
  • [Journal Article] リアルタイムPCR法によるCYP2C9遺伝子多型解析法の開発と民族間差異2003

    • Author(s)
      中居賢司, David Gurwitz
    • Journal Title

      J Cardiology 42

      Pages: 266-266

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] リアルタイムPCR法によるCYP2C9遺伝子多型解析法の開発と民族間差異2003

    • Author(s)
      中居賢司, David Gurwitz
    • Journal Title

      日本心臓病学会誌

    • Related Report
      2004 Annual Research Report
  • [Patent(Industrial Property Rights)] CYP2C9遺伝子および第XII因子遺伝子の一塩基多型を含む領域を同時に増幅するためのプライマーセット2005

    • Inventor(s)
      中居 賢司, 幅野 渉, 中居 恵子, 守屋 彰悟
    • Industrial Property Rights Holder
      日清紡績株式会社
    • Industrial Property Number
      2005-122128
    • Filing Date
      2005-04-20
    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] 中居賢司, David Gurwitz.: "リアルタイムPCR法によるCYP2C9遺伝子多型解析法の開発と民族間差異"日本心臓病学会誌. (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] 中居賢司, 泉本浩史, 他: "Clinical Significance Of CYP2C9 Gene Polymorphisms By Rapid Cycle Real-Time PCR In Patients Receiving Warfarin Therapy"Circulation J. 66. 448 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Nakai K, Habano W, Nakai K, Fukushima N, Fujita T, Gurwitz D: "Ethnic Difference of Coronary Artery Disease-associated SNPs in Two Israeli Healthy Populations Using MALDI-TOF Mass Spectrometry"Life Sciences. (In print). (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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