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Functional Analysis of the mutated ion-channel gene in severe myoclonic epilepsy in infancy

Research Project

Project/Area Number 15591110
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Pediatrics
Research InstitutionOKAYAMA UNIVERSITY

Principal Investigator

OUCHIDA Mamoru  Okayama University, Graduate School of Medicine and Dentistry, Molecular Genetics, Associate Professor, 大学院・医歯学総合研究科, 助教授 (80213635)

Co-Investigator(Kenkyū-buntansha) OHMORI Iori  Okayama University Hospital, Child Neurology, Medical staff, 医学部・歯学部附属病院, 医員
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2004: ¥1,500,000 (Direct Cost: ¥1,500,000)
Fiscal Year 2003: ¥2,000,000 (Direct Cost: ¥2,000,000)
KeywordsEpilepsy / Mutation / ion-channel
Research Abstract

Severe myoclonic epilepsy in infancy(SMEI) is a malignant infant-onset epileptic syndrome with febrile seizures. We analyzed the voltage-gated sodium channel α1-subunit (SCN1A) gene, β1-subunit (SCN1B) gene and γ-aminobutyric acid _A receptor γ2-subunit (GABRG2) gene in DNAs from peripheral blood cells of patients with SMEI and patients with other types of epilepsy. Mutations of the SCN1A gene were detected in 83% of the patients with SMEI, although none with other types of epilepsy. The mutations included deletion, insertion, missense and nonsense mutations. We could not find any mutations of the SCN1B and GABRG2 genes in all patients. Our data suggested that the SCN1A mutations were significantly correlated with SME (p<0.0001).
We cloned the wild type SCN1A cDNA, made the mutant type cDNAs by PCR-based mutagenesis, and constructed the SCN1A cDNA expression plasmids with Lumio-tag at the C-terminal region. When the expression plasmids were transfected into human embryonic kidney 293 cells, we found that some kinds of mutant forms are localized on cell membrane. The result suggests that the mutant forms of SCN1A may function dominant-negatively in the presence of the wild type SCN1A on the cell membrane.
We found two alternative isoforms of SCN1A mRNA in human brain tissues, when we were cloning the cDNA for the expression system. Our analyses revealed that the isoforms loss the gate region of ion-channel, and that many mutations we detected had occurred in the region of SCN1A. These results suggest that the alternative isoforms also may negatively function for wild type of sodium ion-channel, like as a kind of mutant form.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (21 results)

All 2004 Other

All Journal Article (13 results) Publications (8 results)

  • [Journal Article] Establishment and characterization of a biphasic synovial sarcoma cell line, SYO-1.2004

    • Author(s)
      Kawai A.
    • Journal Title

      Cancer Letters 204

      Pages: 105-113

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Positive correlation between allelic loss at chromosome 14q24-31 and poor prognosis of patients with renal cell carcinoma.2004

    • Author(s)
      Kaku H.
    • Journal Title

      Urology 64

      Pages: 176-181

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Aberrant promoter methylation in human DAB2 interactive protein (hDAB2IP) gene in breast cancer.2004

    • Author(s)
      Dote H
    • Journal Title

      Clinical Cancer Research 10

      Pages: 2082-2089

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Tumor-specific exon creation of the HELLS/SMARCA6 gene in non-small cell lung cancer.2004

    • Author(s)
      Yano M
    • Journal Title

      International Journal Cancer. 112

      Pages: 8-13

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Prevalent hyper-methylation of the CDH13 gene promoter in malignant B cell lymphomas.2004

    • Author(s)
      Ogama Y
    • Journal Title

      International Journal of Oncology 25

      Pages: 685-691

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Aberrant promoter methylation of human DAB2 interactive protein (hDAB2IP) gene in lung cancers.2004

    • Author(s)
      Yano M
    • Journal Title

      International Journal Cancer 113

      Pages: 59-66

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Positive correlation between allelic loss at chromosome 14q24- 31 and poor prognosis of patients with renal cell carcinoma.2004

    • Author(s)
      Kaku H.
    • Journal Title

      Urology 64

      Pages: 176-181

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Aberrant promoter methylation in human DAB2 interactive protein (hDAB2IP) gene in breast cancer.2004

    • Author(s)
      Dote H.
    • Journal Title

      Clinical Cancer Research 10

      Pages: 2082-2089

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Tumor-specific exon creation of the HELLS/SMARCA6 gene in non-small cell lung cancer.2004

    • Author(s)
      Yano M.
    • Journal Title

      International Journal of Cancer 112

      Pages: 8-13

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Prevalent hyper-methylation of the CDH13 gene promoter in malignant B cell lymphomas.2004

    • Author(s)
      Ogama Y.
    • Journal Title

      International Journal Oncology 25

      Pages: 685-691

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] Aberrant promoter methylation of human DAB2 interactive protein (hDAB2IP) gene in lung cancers.2004

    • Author(s)
      Yano M.
    • Journal Title

      International Journal of Cancer 113

      Pages: 59-66

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Tumor-specific exon creation of the HELLS/SMARCA6 gene in non-small cell lung cancer.2004

    • Author(s)
      Yano M.
    • Journal Title

      International Journal of Cancer. 112

      Pages: 8-13

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Aberrant promoter methylation of human DAB2 interactive protein (hDAB2IP) gene in lung cancers.2004

    • Author(s)
      Yano M.
    • Journal Title

      International Journal of Cancer. 113

      Pages: 59-66

    • Related Report
      2004 Annual Research Report
  • [Publications] Ohmori, I.: "Is phenotype difference in severe myoclonic epilepsy in infancy related to SCN1A mutants?"Brain and Development. 25. 488-493 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Ohtsuka, Y.: "Paroxysmal movement disorders in severe myoclonic epilepsy in infancy."Brain and Development. 25. 406-410 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Beder, B.L.: "Genome-wide analyses on loss of heterozygosity in head and neck squamous cell carcinomas."Laboratory Investigation. 83. 99-105 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Morimoto, Y.: "Splicing isoform of SYT-SSX fusion protein accelerates transcriptional activity and cell proliferation."Cancer Letters. 199. 35-43 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Toyooka, S.: "Detection of codon 61 point mutations of the K-ras gene in lung and colorectal cancers by enriched PCR"Oncology Reports. 10. 1455-1459 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Koyama, M.: "Activated proliferation of B-cell lymphomas/leukemias with the SHP1 gene silencing by aberrant CpG methylation."Laboratory Investigation. 83. 1849-1858 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Morimoto, Y.: "Single nucleotide polymorphism in fibroblast growth factor receptor 4 at codon 388 is associated with prognosis in high-grade soft tissue sarcoma."Cancer. 98. 2245-2250 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawai, A.: "Establishment and characterization of a biphasic synovial sarcom cell line. SYO-1."Cancer Letters. 204. 105-113 (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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