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Biological significance of unmethylated DNA in human testicular cancer.

Research Project

Project/Area Number 15591682
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field Urology
Research InstitutionDepartment of Urology, Faculty of Medicine, Shiga University of Medical Science

Principal Investigator

NARITA Mitsuhiro (2004)  Shiga University of Medical Science, Department of Urology, Research Assistant, 医学部, 助手 (00263046)

川上 享弘 (2003)  滋賀医科大学, 医学部, 助手 (90346023)

Co-Investigator(Kenkyū-buntansha) OKAMOTO Keisei  Shiga University of Medical Science, Department of Urology, Research Assistant, 医学部, 助手 (50303780)
OKADA Yusaku  Shiga University of Medical Science, Department of Urology, Professor, 医学部, 教授 (20127062)
SAKANO Yuji  Shiga University of Medical Science, Department of Urology, Research Assistant, 医学部, 助手 (00346016)
杉原 洋行  滋賀医科大学, 医学部, 助教授 (30171169)
成田 充弘  滋賀医科大学, 医学部, 助手 (00263046)
Project Period (FY) 2003 – 2004
Project Status Completed (Fiscal Year 2004)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2004: ¥1,600,000 (Direct Cost: ¥1,600,000)
Fiscal Year 2003: ¥1,900,000 (Direct Cost: ¥1,900,000)
Keywordstesticular cancer / methylation / X chromosome / XIST / 癌遺伝子 / 癌感受性遺伝子 / エピジェネテイックス / 腫瘍マーカー
Research Abstract

In this project we found testicular germ-cell tumors(TGCTs) carry unique epigenetic profiles : The DNAs of TGCTs are relatively unmethylated in comparison with those of other somatic tissue derived cancer. Furthermore, we developed a novel DNA tumor marker for testicular germ cell tumors(TGCTs) that is based on the unmethylated DNA profile of a neoplasm.
We have shown that XIST expression in TGCTs is not associated with the methylation of X-linked genes and is therefore mechanistically distinct from the XIST expression in female inactive X chromosomes. Thus, supernumerical X chromosomes in TGCTs were predominantly hypomethylated and active regardless of XIST expression (J.Urol 2003 ).
We have reported that aberrant methylation at the promoter of tumor related genes are common in testicular lymphomas, but not in TGCTs (GCC 2003).
These data suggest that DNA of TGCTs may be ubiquitously regulated as unmethylated.
Thus, it appears difficult to create a methylation-based DNA marker for TGCTs. Alternatively, we hypothesized that unmethylated DNA regions specific for TGCTs, if they exist, could be used as potential DNA markers. Among various genes, we have focused on the XIST gene, which is solely expressed in germ cells among male organs. Unmethylated XIST DNA fragments only exist in female PBLs, but not in male PBLs. We have detected unmethylated XIST DNA fragments in TGCT tissues and matching plasma samples from the patients with TGCTs (Lancet). We also clarified methylation profiles of TGCTs in several cancer testis antigen(CTA) genes (GCC 2005). Mechanisms for maintaining DNA free from methylation in TGCTs are under investigation in comparison with those in primordeal germ cells.

Report

(3 results)
  • 2004 Annual Research Report   Final Research Report Summary
  • 2003 Annual Research Report
  • Research Products

    (21 results)

All 2005 2004 2003 2002 Other

All Journal Article (16 results) Publications (5 results)

  • [Journal Article] Distinctive epigenetic phenotype of cancer testis antigen genes among seminomatous and non-seminomatous testicular germ cell tumors.2005

    • Author(s)
      Zhang C, Kawakami T, Okamoto K et al.
    • Journal Title

      Genes, Chromosomes and Cancer 23

      Pages: 104-112

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Distinctive epigenetic phenotype of cancer testis antigen genes among seminomatous and non-seminomatous testicuiar germ cell tumors.2005

    • Author(s)
      Zhang C, Kawakami T, Okada Y, Okamoto K Genes
    • Journal Title

      Chromosomes and Cancer 43

      Pages: 104-112

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Distinctive epigenetic phenotype of cancer testis antigen genes among seminomatous and non-seminomatous testicular germ cell tumors.2005

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      Genes, Chromosomes and Cancer (in press)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] XIST unmethylated DNA fragments in male-derived plasma as a tumor marker for testicular cancer.2004

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      LANCET 363

      Pages: 40-42

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Annual Research Report 2004 Final Research Report Summary
  • [Journal Article] The MET proto-oncogene is not a major target for the gain of chromosome 7 in Testicular Germ Cell Tumors of adolescents.2004

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      Virchows Archive 444

      Pages: 480-481

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Characterization of loss-of-inactive X in Klinefelter syndrome and female derived cancer cells.2004

    • Author(s)
      Kawakami T, Zhang C, Taniguchi T, Kim CJ, Okada Y, Sugihara H, Hattori T, Reeve AE, Ogawa O, Okamoto K.
    • Journal Title

      ONCOGENE 23

      Pages: 6163-6163

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] XIST unmethylated DNA fragments in male-derived plasma as a tumour marker for testicuiar cancer.2004

    • Author(s)
      Kawakami, T., Okamoto, K., Ogawa, O.Okada, Y.
    • Journal Title

      Lancet 363

      Pages: 40-40

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The MET proto-oncogene is not a major target for the gain of chromosome 7 in testicuiar germ-cell tumors of adolescents.2004

    • Author(s)
      Kawakami, T., Okamoto, K, Sugihara, H.Hattori, T.Reeve, A.E., Ogawa, O.Okada, Y.
    • Journal Title

      Virchows Arch 444

      Pages: 480-480

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Multipoint methylation analysis indicates distinctive patterns of methylation among testicular germ cell tumors and testicular malignant lymphomas.2003

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      Genes, Chromosomes and Cancer 38

      Pages: 97-101

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Multipoint methylation analysis indicates a distinctive epigenetic phenotype among testicuiar germ cell tumors and testicular malignant lymphomas.2003

    • Author(s)
      Kawakami, T., Okamoto, K., Kataoka A, Koizumi S, Iwaki H, Sugihara H, Reeve AE, Ogawa O, Okada Y.
    • Journal Title

      Genes Chromosomes Cancer 38

      Pages: 97-97

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Multipoint methylation and expression analysis of tumor suppressor genes in human renal cancer cells.2003

    • Author(s)
      Kawakami, T., Okamoto, K., Ogawa, O., Okada Y.
    • Journal Title

      Urology 61

      Pages: 226-226

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] The Roles of Supemumerical X chromosomes and XIST expression in Testicular Germ Cell Tumors.2003

    • Author(s)
      Kawakami T, Okamoto K, Sugihara H, Hattori T, Reeve AE, Ogawa O, Okada Y
    • Journal Title

      J Urol 169

      Pages: 1546-1552

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Journal Article] Multipoint methylation analysis indicates distinctive patterns of methylation among2003

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      Genes, Chromosomes and Cancer 38

      Pages: 97-101

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The roles of supernumerical X chromosomes and XIST expression in testicular germ cell tumors2003

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      J. Urol 169

      Pages: 1546-1552

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Multipoint methylation and expression analysis of tumor suppressor Genes in human renal cancer cell2003

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      Urology 61

      Pages: 226-230

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The roles of supernumerical X chromosomes and XIST expression in testicular germ cell tumors2002

    • Author(s)
      Kawakami T, Okamoto K et al.
    • Journal Title

      J.Urol 169

      Pages: 1546-1552

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2004 Final Research Report Summary
  • [Publications] Kawakami et al.: "XIST unmethylated DNA fragments in male-derived plasma as a tumor marker for testicular cancer"The LANCET. 363. 40-42 (2004)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawakami et al.: "Multipoint methylation analysis indicates distinctive patterns of methylation among testicular germ cell tumors and testicular malignant lymphomas"Genes, Chromosomes and Cancer. 38. 97-101 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawakami et al.: "The roles of supemumerical X chromosomes and XIST expression in testicular germ cell tumors"Journal of Urology. 169. 1546-1552 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawakami et al.: "Multipoint methylation and expression analysis of tumor suppressor genes in human renal cancer cells"Urology. 60. 226-230 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] Kawakami et al.: "The MET proto-oncogene is not a major target for the gain chromosome 7 in Testicular Germ Cell Tumors of adolescents"Virchows Archiv. in press. (2004)

    • Related Report
      2003 Annual Research Report

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Published: 2003-04-01   Modified: 2016-04-21  

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