• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Unstructured Multi-Grid method and the efficient implementation technique on parallel machines

Research Project

Project/Area Number 15607005
Research Category

Grant-in-Aid for Scientific Research (C)

Allocation TypeSingle-year Grants
Section一般
Research Field 計算科学
Research InstitutionUniversity of Tokyo

Principal Investigator

OYANAGI Yoshio  The University of Tokyo, Graduate School of Information Science and Technology, Professor, 大学院・情報理工学系研究科, 教授 (60011673)

Co-Investigator(Kenkyū-buntansha) SUDA Reiji  The University of Tokyo, Graduate School of Information Science and Technology, Associate Professor, 大学院・情報理工学系研究科, 助教授 (40251392)
NISHIDA Akira  The University of Tokyo, Graduate School of Information Science and Technology, Research Associate, 大学院・情報理工学系研究科, 助手 (60302808)
Project Period (FY) 2003 – 2005
Project Status Completed (Fiscal Year 2005)
Budget Amount *help
¥3,500,000 (Direct Cost: ¥3,500,000)
Fiscal Year 2005: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2004: ¥900,000 (Direct Cost: ¥900,000)
Fiscal Year 2003: ¥1,700,000 (Direct Cost: ¥1,700,000)
KeywordsLinear Equation / Multi-Grid method / Conjugate Gradient Method / Preconditioning / Parallelization / Vectorization / Load balance / Network / 共役傾斜法 / 偏微分方程式 / 線形方程式 / 反復解法 / 並列処理 / 領域分割 / 異方性問題 / データ構造 / ベクトル計算機 / 偏微分方程式解法 / 代数的マルチグリッド法 / 格納方法
Research Abstract

Efficient preconditioning for Conjugate Gradient method requires parallelization and good acceleration of convergence. These two things are often incompatible. Thus, the authors proposed the Multi-Grid preconditioning, which satisfies both of two things, and have demonstrated the efficiency of the method.
In this study, we considered the problems with unstructured grids and with a big anisotropy. SA-AMG method, which is one of the multi-grid methods, calculates the smaller matrix and reaches the convergence efficiently utilizing that smaller matrix. But the SA-AMG method's efficiency deteriorates for anisotropic problems. The authors have shown that the smaller matrix creation method based on domain border information enables the method efficient convergence.
We also studied the vectorization of the SA-AMG method for the implementation technique. Three matrix multiplications occupy the most calculation cost. For vectorization of this part, we tested various combinations of sparse matrix … More data structures and demonstrated the method based on the JDS and the CRS data structures is the most efficient for 3-Dimentional elastic problems. For another related study of the implementation technique, the authors created the re-distribution and re-ordering library for distributed sparse matrix. This library offers the frame work of the dynamic re-distribution and re-ordering, and enables those things easily.
For other study of basic parallel implementation technique, the authors have studied the redistribution scheduling problem for finite sized multi-master divisible load problem. By identification of some parameters the authors showed that the simulation duplicates the behavior of the real system. We have also studied data distribution problem of the parallel molecular dynamics, and researched the best data distribution method in the case that the communication band-width and latency between computer nodes are not uniform. It is a challenge for the future to apply these basic techniques for parallel implementation of multi-grid method on various computer platforms. Less

Report

(4 results)
  • 2005 Annual Research Report   Final Research Report Summary
  • 2004 Annual Research Report
  • 2003 Annual Research Report
  • Research Products

    (54 results)

All 2006 2005 2004 2003 Other

All Journal Article (48 results) Publications (6 results)

  • [Journal Article] 有限サイズのmulti-master divisible load問題に対する再分散スケジュールアルゴリズム2006

    • Author(s)
      須田礼仁, 富さやか
    • Journal Title

      情報処理学会研究報告 2006(20)

      Pages: 109-114

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Evaluation of Parallel Aggregate Creation Orders : Smoothed Aggregation Algebraic Multigrid Method2005

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      IFIP International Federation for Information Processing 172

      Pages: 99-122

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Annual Research Report 2005 Final Research Report Summary
  • [Journal Article] Parallel Matrix Distribution Library for Sparse Matrix Solvers2005

    • Author(s)
      A.Fujii, R.Suda, A.Nishida
    • Journal Title

      Proceedings of The 8th International Conference on High Performance Computing in Asia Pacific Region (HPC Asia 2005)

      Pages: 213-219

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Multi-master divisible loadの漸近最適スケジューリングの実機への実装2005

    • Author(s)
      富さやか, 須田礼仁
    • Journal Title

      社団法人情報処理学会研究報告 HPC 103(7) IPSJ SIG Technical lReport

    • NAID

      110002952247

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Multi-master divisible loadモデルに対する漸近最適スケジューリングの評価2005

    • Author(s)
      富さやか, 須田礼仁
    • Journal Title

      社団法人情報処理学会研究報告HPC HPC 102(9) IPSJ SIG Technical lReport 2005(57)

      Pages: 51-62

    • NAID

      110002950900

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 2次元列ベース分割によるヘテロ型クラスタのためのLU分解2005

    • Author(s)
      三森 慶卓, 須田 礼仁
    • Journal Title

      社団法人情報処理学会研究報告 HPC 103(22) IPSJ SIG Technical lReport

    • NAID

      110002952262

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] ヘテロ型クラスタのための2次元列ベース分割における通信スケジューリングと分割の最適化2005

    • Author(s)
      三森 慶卓, 須田 礼仁
    • Journal Title

      社団法人情報処理学会研究報告 HPC 102(10) IPSJ SIG Technical lReport

    • NAID

      110002950901

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Network-aware Data Mapping on Parallel Molecular Dynamics2005

    • Author(s)
      Y.Hourai, A.Nishida, Y.Oyanagi
    • Journal Title

      Proc. Of 11^<th> International Conference on Parallel and Distributed Systems (ICPAD2005)

      Pages: 126-132

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The Multi-Grid Preconditioned Conjugate Gradient Method2005

    • Author(s)
      Y.Oyanagi
    • Journal Title

      2005 International Conference on Scientific Computing and Differential Equations (SciCADE2005)

      Pages: 6-6

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] AMG Preconditioned Conjugate Gradient Type Methods for Nonsymmetric Eigenproblems2005

    • Author(s)
      西田 晃
    • Journal Title

      Twelfth Copper Mountain Conference on Multigrid Methods

      Pages: 30-30

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evaluation of Parallel Aggregate Creation Orders : Smoothed Aggregation Algebraic Multigrid Method2005

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      IFIP International Federation for Information Processing (Springer) Vol.172

      Pages: 99-122

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Asymptotically optimum scheduling of multi-master divisible load problems evaluated on actual machines2005

    • Author(s)
      S.Tomi, R.Suda
    • Journal Title

      IPSJ SIG Technical Report HPC 103(7)

    • NAID

      110002952247

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Evaluation of asymptotically optimum scheduling algorithms for multi-master divisible load model2005

    • Author(s)
      S.Tomi, R.Suda
    • Journal Title

      IPSJ SIG Technical Report HPC 102(9)

    • NAID

      110002950900

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] LU Decomposition for Heterogeneous Clusters Using Two-Dimensional Column-Based Data Distributional Column-Based Data Distribution2005

    • Author(s)
      Y.Mimori, R.Suda
    • Journal Title

      IPSJ SIG Technical Report HPC 103(22)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Scheduling of Communication and Optimization of Data Distribution on Two-Dimensional Column-Based Distribution for Heterogeneous Clusters2005

    • Author(s)
      Y.Mimori, R.Suda
    • Journal Title

      IPSJ SIG Technical Report HPC 102(10)

    • NAID

      110002950901

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Network-aware Data Mapping on Parallel Molecular Dynamics2005

    • Author(s)
      Y.Hourai, A.Nishida, Y.Oyanagi
    • Journal Title

      Proceedings Of 11th International Conference on Parallel and Distributed Systems (ICPAD2005)

      Pages: 126-132

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The Multi-Grid Preconditioned Conjugate Gradient Method2005

    • Author(s)
      Y.Oyanagi
    • Journal Title

      International Conference on Scientific Computing and Differential Equations (SciCADE2005)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] AMG Preconditioned Conjugate Gradient Type Methods for Nonsymmetric Eigenproblems2005

    • Author(s)
      A.Nishida
    • Journal Title

      Twelfth Copper Mountain Conference on Multigrid Methods April

      Pages: 3-8

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Netwoark-aware Data Mapping on Parallel Molecular Dynamics2005

    • Author(s)
      Y.Hourai, A.Nishida, Y.Oyanagi
    • Journal Title

      Proc. Of 11^<th> International Conference on Parallel and Distributed Systems (ICPADS2005)

      Pages: 126-132

    • Related Report
      2005 Annual Research Report
  • [Journal Article] The Multi-Grid Preconditioned Conjugate Gradient Method2005

    • Author(s)
      Y.Oyanagi
    • Journal Title

      2005 International Conference on Scientific Computing and Differenctial Equations (SciCADE2005)

      Pages: 6-6

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Fast Spherical Harmonic Transform with the Generalized Fast Multipole Method2005

    • Author(s)
      R.Suda
    • Journal Title

      2005 International Conference on Scientific Computing and Differenctial Equations (SciCADE2005)

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Multi-master divisible loadモデルに対する前金最適スケジューリングの評価2005

    • Author(s)
      富さやか, 須田礼仁
    • Journal Title

      情報処理学会研究報告 2005(57)

      Pages: 51-62

    • Related Report
      2005 Annual Research Report
  • [Journal Article] ヘテロ型クラスタのための2次元列ベース分割における通信スケジュールと分割の最適化2005

    • Author(s)
      三森慶卓, 須田礼仁
    • Journal Title

      情報処理学会研究報告 2005(81)

      Pages: 37-42

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Multi-master divisible loadの漸近最適スケジューリングの実機への実装2005

    • Author(s)
      富さやか, 須田礼仁
    • Journal Title

      情報処理学会研究報告 2005(81)

      Pages: 37-42

    • NAID

      110002952247

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 2次元列ベース分割によるヘテロ型クラスタのためのLU分解2005

    • Author(s)
      三森慶卓, 須田礼仁
    • Journal Title

      情報処理学会研究報告 2005(81)

      Pages: 127-132

    • NAID

      110002952262

    • Related Report
      2005 Annual Research Report
  • [Journal Article] 高速直交変換ルーチンFXTPACKの球面調和関数変換における高性能実装と性能評価2005

    • Author(s)
      須田礼仁
    • Journal Title

      情報処理学会研究報告 2005(97)

      Pages: 31-36

    • Related Report
      2005 Annual Research Report
  • [Journal Article] Vectorized Algebraic Multigrid Algorithm for Unstructured Finite Element Problems.2004

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi.
    • Journal Title

      Proceedings of 6th International Meeting on High Performance Computing for Computational Science (VECPAR2004), Poster Presentation, June 28-30, Valencia.

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The Evaluation of The Aggregate Creation Orders : Smoothed Aggregation Algebraic MultiGrid Method.2004

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi.
    • Journal Title

      Proceedings of International Symposium on High Performance Computational Science and Engineering (HPCSE-04) (CDROM)

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Optimal Broadcast Scheduling on Tree-structured Networks2004

    • Author(s)
      Y.Hourai, A.Nishida, Y.Oyanagi
    • Journal Title

      IPSJ Transactions on Advanced Computing Systems Vol. 44, No. SIG3

      Pages: 100-108

    • NAID

      10012691545

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 非線形最適化問題としての固有値解法 : 最適化手法の適用と評価2004

    • Author(s)
      西田 晃
    • Journal Title

      2004年日本応用数理学会年会予稿集

      Pages: 220-221

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 大規模固有値問題への並列AMG前処理付共役勾配法の適用と評価2004

    • Author(s)
      西田 晃
    • Journal Title

      情報処理学会研究報告 2004(20)

      Pages: 205-210

    • NAID

      110002774623

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 非対称固有値問題への並列AMG前処理付共役勾配法の適用と評価2004

    • Author(s)
      西田 晃
    • Journal Title

      情報処理学会研究報告 2004(81)

      Pages: 85-90

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Vectorized Algebraic Multigrid Algorithm for Unstructured Finite Element Problems2004

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      Proceedings of 6th International Meeting on High Performance Computing for Computational Science (VECPAR2004), Poster Presentation, June (Valencia)

      Pages: 28-30

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] The Evaluation of The Aggregate Creation Orders : Smoothed Aggregation Algebraic MultiGrid Method2004

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      Proceedings of International Symposium on High Performance Computational Science and Engineering (HPCSE-04) (CDROM)

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Eigenvalue Problems as Nonlinear Optimization : Application and Evaluation of Optimization Methodologies2004

    • Author(s)
      A.Nishda
    • Journal Title

      Proceedings of the 2004 annual conference of the Japan Society for Industrial Applied Mathematics

      Pages: 220-221

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Performance Evaluation of Parallel AMG Preconditioned Conjugate Gradient Methods for Large Scale Eigenproblems2004

    • Author(s)
      A.Nishda
    • Journal Title

      IPSJ SIG Notes 2004(20)

      Pages: 205-210

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Parallel AMG Preconditioned Conjugate Residual Methods for Nonsymmetric Eigenproblems and its Evaluation2004

    • Author(s)
      A.Nishda
    • Journal Title

      IPSJ SIG Notes (in Japanese) 2004(81)

      Pages: 85-90

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Optimal Broadcast Scheduling on Tree-structured Networks2004

    • Author(s)
      Y.Hourai, A.Nishida, Y.Oyanagi
    • Journal Title

      IPSJ Transactions on Advanced Computing and Systems. Vol.44, No.SIG3

      Pages: 100-108

    • NAID

      10012691545

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Optimal Broadcast Scheduling in Tree-structured Networks,2004

    • Author(s)
      Y.Hourai, A.Nishida, Y.Oyanagi
    • Journal Title

      IPSJ Transactions on Advanced Computing Systems Vol.44, No.SIG 3(ACS5)

      Pages: 100-108

    • NAID

      10012691545

    • Related Report
      2004 Annual Research Report
  • [Journal Article] The Evaluation of The Aggregate Creation Orders : Smoothed Aggregation Algebraic MultiGrid Method2004

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      Proceedings of the International Symposium on High Performance Computational Science and Engineering (CD-ROM)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Vectorized Algebraic Multigrid Algorithm for Unstructured Finite Element Problems2004

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      Proceedings of the 6th Internarional Meeting on High Performance Computing fir Computiational Science (poster)

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Stability analysis of the fast Legendre transform algorithm based on the fast multipole method2004

    • Author(s)
      R.soda
    • Journal Title

      Proe. Estonian Acad. Sci. Phys. Math 50, 2

      Pages: 107-115

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 非対称固有値問題への並列AMG前処理付共役残差法の適用と評価2004

    • Author(s)
      西田晃
    • Journal Title

      情報処理学会研究報告 2004, 81

      Pages: 85-90

    • NAID

      110002914116

    • Related Report
      2004 Annual Research Report
  • [Journal Article] 非線形最適化問題としての固有値解法:最適化手法の適用と評価2004

    • Author(s)
      西田晃
    • Journal Title

      日本応用数理学会年会予稿集

      Pages: 220-221

    • Related Report
      2004 Annual Research Report
  • [Journal Article] Smoothed Aggregation MG法の異方性問題への対応と評価2003

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi.
    • Journal Title

      先進的計算基盤システムシンポジウム(SACSIS2003),

      Pages: 137-144

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] 大規模固有値問題への前処理付共役勾配法の適用と評価2003

    • Author(s)
      西田 晃
    • Journal Title

      2003年日本応用数理学会年会予稿集

      Pages: 326-327

    • Description
      「研究成果報告書概要(和文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] Improvement evaluation of Smoothed Aggregation MG for anisotropic problems2003

    • Author(s)
      A.Fujii, A.Nishida, Y.Oyanagi
    • Journal Title

      Proceedings of Symposium on Advanced Computing Systems Infrastructures

      Pages: 137-144

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Journal Article] A Short Survey of Applications and Evaluations of Preconditioned Conjugate Gradient Method for Large Scale Eigenvalue Problems2003

    • Author(s)
      A.Nishida
    • Journal Title

      Proceedings of the 2003 annual conference of the Japan Society for Industrial Applied Mathematics

      Pages: 326-327

    • Description
      「研究成果報告書概要(欧文)」より
    • Related Report
      2005 Final Research Report Summary
  • [Publications] A.Nishida, Y.Oyanagi: "Performance Evaluation of Low Level Multithreaded BLAS Kernels on Intel Processor based cc-NUMA Systems"Lecture Notes in Computer Science, Vol.2858. 500-510 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Nukada, A.Nishida, Y.Oyanagi: "Parallel Implementation of FFT Algorithm on Distributed Shared Memory Architecture and its Optimization"IPSJ Transaction on Advanced Computing Systems. Vol.44, No.SIG6. 1-8 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Fujii, A.Nishida, Y.Oyanagi: "Parallel AMG Algorithm by Domain Decomposition"IPSJ Transaction on Advanced Computing Systems. Vol.44, No.SIG6. 9-17 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Fujii, A.Nishida, Y.Oyanagi: "Improvement and evaluation of Smoothed Aggregation MG for anisotropic problems"Proceedings of Symposium on Advanced Computing Systems and Infrastructures. 137-144 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Nukada, A.Nishida, Y.Oyanagi: "Parallel Implementation of FFT Algorithm on Distributed Shared Memory Architecture and its Optimization"Proceedings of High Performance Computing Symposium 2003. 63-70 (2003)

    • Related Report
      2003 Annual Research Report
  • [Publications] A.Fujii, A.Nishida, Y.Oyanagi: "Parallel AMG Algorithm by Domain Decomposition"Proceedings of High Performance Computing Symposium 2003. 83-90 (2003)

    • Related Report
      2003 Annual Research Report

URL: 

Published: 2003-04-01   Modified: 2016-04-21  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi