• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Detection of chemical substances with epigenetic activity to protect environmental risk by the adverse outcome pathway approach

Research Project

Project/Area Number 15H01749
Research Category

Grant-in-Aid for Scientific Research (A)

Allocation TypeSingle-year Grants
Section一般
Research Field Environmental risk control and evaluation
Research InstitutionYokohama College of Pharmacy (2018)
National Institute for Environmental Studies (2015-2017)

Principal Investigator

Sone Hideko  横浜薬科大学, 薬学部, 教授 (60280715)

Co-Investigator(Kenkyū-buntansha) 伊藤 智彦  国立研究開発法人国立環境研究所, 環境リスク・健康研究センター, 主任研究員 (60391067)
桂 真理  東京大学, アイソトープ総合センター, 特任助教 (30436571)
藤渕 航  京都大学, iPS細胞研究所, 教授 (60273512)
大鐘 潤  明治大学, 農学部, 専任准教授 (50313078)
中尾 洋一  早稲田大学, 理工学術院, 教授 (60282696)
阿部 訓也  国立研究開発法人理化学研究所, バイオリソース研究センター, チームリーダー (40240915)
Research Collaborator Nansai Hiroko  
Kondo Masayo  
Suzuki Shinnosuke  
Otsuka Satoshi  
Project Period (FY) 2015-04-01 – 2019-03-31
Project Status Completed (Fiscal Year 2018)
Budget Amount *help
¥45,500,000 (Direct Cost: ¥35,000,000、Indirect Cost: ¥10,500,000)
Fiscal Year 2018: ¥9,490,000 (Direct Cost: ¥7,300,000、Indirect Cost: ¥2,190,000)
Fiscal Year 2017: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Fiscal Year 2016: ¥10,270,000 (Direct Cost: ¥7,900,000、Indirect Cost: ¥2,370,000)
Fiscal Year 2015: ¥15,470,000 (Direct Cost: ¥11,900,000、Indirect Cost: ¥3,570,000)
Keywordsエピジェネティック / 化学物質管理 / 影響評価 / 有害物質 / 幹細胞 / 毒性予測 / 放射線 / エピジェネティクス / in vitro / 予防対策 / 生殖発生毒性 / バイオインフォマティクス / 環境 / スクリーニング / 化学物質
Outline of Final Research Achievements

We developed a method to visually detect DNA methylation and histone modification as an index of epigenetic status using pluripotent stem cells like mouse ES and human iPS cells. Using this engineered cell lines, one hundred and thirty-five chemical substances were analyzed. Further epigenetic toxicity was detected by examining DNA methylation variation in the promoter region of the disease causing gene in detail by analysis of specific DNA sequences. The effect of irradiation on the differentiation of human iPS cells into retinal ganglion cells was also investigated. Further we have developed a method that can detect differences in epigenetic status during differentiation derived from undifferentiated stem cells. These results suggest that the rapid detection of epigenetic activity using pluripotent stem cells can detect initial events of exposures to chemicals and environmental factors and then predict the later effects.

Academic Significance and Societal Importance of the Research Achievements

エピジェネティック変異の検出は、生体が化学物質に曝露されゲノムで誘発される早期なかく乱イベントを検出するものである。未だ曝露・影響の実態が把握されていない化学物質は、環境中に多く存在する現状では、未然予防の観点からヒト健康影響や野生動物の健常な環境を確保するシステムの開発が不可欠である。特に、世代を受け継いで刻印される影響を有するであろう物質の把握のためには、DNA(CpG)メチル化、ヒストン修飾の2指標をエンドポイントとした簡易検出系の開発が必要である。このことが、毒性発現メカニズムを基軸としたシステムの開発につながり、精緻な化学物質管理に有用な情報が提供できる点が学術的に価値がある。

Report

(5 results)
  • 2018 Annual Research Report   Final Research Report ( PDF )
  • 2017 Annual Research Report
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (82 results)

All 2019 2018 2017 2016 2015

All Journal Article (31 results) (of which Int'l Joint Research: 5 results,  Peer Reviewed: 28 results,  Open Access: 20 results,  Acknowledgement Compliant: 3 results) Presentation (50 results) (of which Int'l Joint Research: 18 results,  Invited: 16 results) Patent(Industrial Property Rights) (1 results)

  • [Journal Article] Epigenetic Effects of Exposure to Insecticide on Early Differentiation of Mouse Embryonic Stem Cells2019

    • Author(s)
      Wang W, Otsuka S, Nansai H, Ito T, Abe K, Nakao Y, Ohgane J, Yoneda M, Sone H
    • Journal Title

      bioRxiv

      Volume: なし Pages: 628487-628487

    • DOI

      10.1101/628487

    • Related Report
      2018 Annual Research Report
  • [Journal Article] Xist/Tsix expression dynamics during mouse peri-implantation development revealed by whole-mount 3D RNA-FISH2019

    • Author(s)
      Shiura H, Abe K.
    • Journal Title

      Sci Rep.

      Volume: 9 Issue: 1 Pages: 3637-3637

    • DOI

      10.1038/s41598-019-38807-0

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Construction of a High-precision Chemical Prediction System Using Human ESCs2018

    • Author(s)
      山根順子,油谷幸代,今西哲,赤沼宏美,永野麗子,加藤毅,曽根秀子,大迫誠一郎,藤渕航
    • Journal Title

      YAKUGAKU ZASSHI

      Volume: 138 Issue: 6 Pages: 815-822

    • DOI

      10.1248/yakushi.17-00213-2

    • NAID

      130007382228

    • ISSN
      0031-6903, 1347-5231
    • Year and Date
      2018-06-01
    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Multiparameter Phenotypic Profiling in MCF-7 Cells for Assessing the Toxicity and Estrogenic Activity of Whole Environmental Water.2018

    • Author(s)
      Wang W, Tada M, Nakajima D, Sakai M, Yoneda M, Sone H
    • Journal Title

      Environ Sci Technol

      Volume: 52 Issue: 16 Pages: 9277-9284

    • DOI

      10.1021/acs.est.8b01696

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Stem Cell-Based Methods to Predict Developmental Chemical Toxicity2018

    • Author(s)
      Takahashi H, Qin XY, Sone H, Fujibuchi W
    • Journal Title

      Methods Mol Biol

      Volume: なし Pages: 475-483

    • DOI

      10.1007/978-1-4939-7899-1_21

    • ISBN
      9781493978984, 9781493978991
    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Expression of human mutant cyclin dependent kinase 4, Cyclin D and telomerase extends the life span but does not immortalize fibroblasts derived from loggerhead sea turtle (Caretta caretta).2018

    • Author(s)
      Fukuda T, Eitsuka T, Donai K, Kurita M, Saito T, Okamoto H, Kinoshita K, Katayama M, Nitto H, Uchida T, Onuma M, Sone H, Inoue-Murayama M, Kiyono T.
    • Journal Title

      Sci Rep

      Volume: 8 Issue: 1 Pages: 9229-9229

    • DOI

      10.1038/s41598-018-27271-x

    • NAID

      120006979734

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cell Type-Specific Survey of Epigenetic Modifications by Tandem Chromatin Immunoprecipitation Sequencing2018

    • Author(s)
      Mito Mari、Kadota Mitsutaka、Tanaka Kaori、Furuta Yasuhide、Abe Kuniya、Iwasaki Shintaro、Nakagawa Shinichi
    • Journal Title

      Scientific Reports

      Volume: 8 Issue: 1 Pages: 1143-1143

    • DOI

      10.1038/s41598-018-19494-9

    • NAID

      120006398777

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A simplified and efficient protocol for derivation and maintenance of high-quality mouse primed pluripotent stem cells using Wnt inhibition2018

    • Author(s)
      Kondo M, Sugimoto M, Abe K.
    • Journal Title

      Curr Protoc Stem Cell Biol.

      Volume: 46 Issue: 1

    • DOI

      10.1002/cpsc.60

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Female mice lacking Ftx lncRNA exhibit impaired X-chromosome inactivation and a microphthalmia-like phenotype.2018

    • Author(s)
      Hosoi Y, Soma M, Shiura H, Sado T, Hasuwa H, Abe K, Kohda T, Ishino F, Kobayashi S
    • Journal Title

      Nat Commun

      Volume: 9(1) Issue: 1 Pages: 4618-4618

    • DOI

      10.1038/s41467-018-06327-6

    • Related Report
      2018 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] RNA-FISH and Immunofluorescence of Mouse Preimplantation and Postimplantation Embryos2018

    • Author(s)
      Shiura H, Sakata, Abe K, Sado T.
    • Journal Title

      Methods Mol Biol.

      Volume: 1861 Pages: 161-176

    • DOI

      10.1007/978-1-4939-8766-5_13

    • ISBN
      9781493987658, 9781493987665
    • Related Report
      2018 Annual Research Report
    • Peer Reviewed
  • [Journal Article] ヒトES細胞を用いた高精度な化合物毒性予測2018

    • Author(s)
      山根順子,藤渕航
    • Journal Title

      谷本学校 毒性質問箱

      Volume: 20 Pages: 24-29

    • Related Report
      2018 Annual Research Report
  • [Journal Article] SCPortalen: human and mouse single-cell centric database2017

    • Author(s)
      Abugessaisa Imad、Noguchi Shuhei、Bottcher Michael、Hasegawa Akira、Kouno Tsukasa、Kato Sachi、Tada Yuhki、Ura Hiroki、Abe Kuniya、Shin Jay W、Plessy Charles、Carninci Piero、Kasukawa Takeya
    • Journal Title

      Nucleic Acids Research

      Volume: 46 Issue: D1 Pages: D781-D787

    • DOI

      10.1093/nar/gkx949

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Locus coeruleus input to hippocampal CA3 drives single-trial learning of a novel context2017

    • Author(s)
      Wagatsuma Akiko、Okuyama Teruhiro、Sun Chen、Smith Lillian M.、Abe Kuniya、Tonegawa Susumu
    • Journal Title

      Proceedings of the National Academy of Sciences

      Volume: 115 Issue: 2 Pages: 2-2

    • DOI

      10.1073/pnas.1714082115

    • Related Report
      2018 Annual Research Report 2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Genome-wide DNA methylation sequencing revealed that miR-663a is a novel epimutation candidate in CIMP- high endometrial cancer.2017

    • Author(s)
      Megumi Yanokura, Kouji Banno, Masataka Adachi, Daisuke Aoki, Kuniya Abe
    • Journal Title

      International Journal of Oncology

      Volume: - Issue: 6 Pages: 1934-1946

    • DOI

      10.3892/ijo.2017.3966

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Evidence of exposure to chemicals and heavy metals during pregnancy in Japanese women2017

    • Author(s)
      Maekawa Ryo、Ito Rie、Iwasaki Yusuke、Saito Koichi、Akutsu Kazuhiko、Takatori Satoshi、Ishii Rie、Kondo Fumio、Arai Yoshikazu、Ohgane Jun、Shiota Kunio、Makino Tsunehisa、Sugino Norihiro
    • Journal Title

      Reproductive Medicine and Biology

      Volume: 16 Issue: 4 Pages: 337-348

    • DOI

      10.1002/rmb2.12049

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Establishment of DNA methylation patterns of the <i>Fibrillin1</i> (<i>FBN1</i>) gene in porcine embryos and tissues2017

    • Author(s)
      Arai Y, Umeyama K, Takeuchi K, Okazaki N, Hichiwa N, Yashima S, Nakano K, Nagashima H, Ohgane J
    • Journal Title

      Journal of Reproduction and Development

      Volume: 63 Issue: 2 Pages: 157-165

    • DOI

      10.1262/jrd.2016-158

    • NAID

      130007314629

    • ISSN
      0916-8818, 1348-4400
    • Related Report
      2017 Annual Research Report 2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] ES細胞と遺伝子ネットワークを用いた機械学習による毒性予測システム2017

    • Author(s)
      橋弘樹、藤渕航
    • Journal Title

      医学のあゆみ

      Volume: 62 Pages: 1033-1034

    • Related Report
      2017 Annual Research Report
  • [Journal Article] Automated detection and tracking of cell clusters in time-lapse fluorescence microscopy images.2017

    • Author(s)
      Chang YH, Yokota H, Abe K, Tang CT, Tsai MD
    • Journal Title

      Journal of Medical and Biological Engineering

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Fluorescence microscopy image processing and visualization for analyzing cell kinematics, proliferation and attachment in mouse embryonic stem cell culture2017

    • Author(s)
      Chang YH, Yokota H, Kuniya Abe, Li CC, Tsai MD
    • Journal Title

      2016 IEEE 16th International Conference on Bioinformatics and Bioengineering (BIBE)

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Conserved role of Ovo in germline development in mouse and Drosophila.2017

    • Author(s)
      Hayashi, M., Shinozuka, Y., Shigenobu, S., Sato, M., Sugimoto, M., Ito, S., Abe, K., Kobayashi, S.
    • Journal Title

      Scientific Report

      Volume: 6 Issue: 1 Pages: 40056-40056

    • DOI

      10.1038/srep40056

    • NAID

      120007135169

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] CRISPR/Cas9-mediated genome editing in wild-derived mice: generation of tamed wild-derived strains by mutation of the a (nonagouti) gene2017

    • Author(s)
      Michiko Hirose, Ayumi Hasegawa, Keiji Mochida, Shogo Matoba, Yuki Hatanaka, Kimiko Inoue, Tatsuhiko Goto, Hideki Kaneda, Ikuko Yamada, Tamio Furuse, Kuniya Abe, Yoshihisa Uenoyama, Hiroko Tsukamura, Shigeharu Wakana, Arata Honda, and Atsuo Ogura
    • Journal Title

      Scientific Reports

      Volume: 7 Issue: 1 Pages: 42476-42476

    • DOI

      10.1038/srep42476

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Development of Enhanced Reduced Representation Bisulfite Sequencing Method for Single-cell Methylome Analysis2017

    • Author(s)
      Yamane J, Mori T, Taniyama N, Kobayashi K, Fujibuchi W.
    • Journal Title

      Genomics and Computational Biology

      Volume: 3(2) Issue: 2 Pages: 49-49

    • DOI

      10.18547/gcb.2017.vol3.iss2.e49

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Cellular dynamics of mouse trophoblast stem cells: Identification of a persistent stem cell type.2016

    • Author(s)
      Motomura K, Oikawa M, Hirose M, Honda A, Togayachi S, Miyoshi H, Ohinata Y, Sugimoto M, Abe K, Inoue K, Ogura A.
    • Journal Title

      Biology of Reproduction

      Volume: 94 Issue: 6 Pages: 122-122

    • DOI

      10.1095/biolreprod.115.137125

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Methylation Analysis of DNA Mismatch Repair Genes Using DNA Derived from the Peripheral Blood of Patients with Endometrial Cancer: Epimutation in Endometrial Carcinogenesis.2016

    • Author(s)
      Takeda T, Banno K, Yanokura M, Adachi M, Iijima M, Kunitomi H, Nakamura K, Iida M, Nogami Y, Umene K, Masuda K, Kobayashi Y, Yamagami W, Hirasawa A, Tominaga E, Susumu N, Aoki D
    • Journal Title

      Genes (Basel)

      Volume: 7 Issue: 10 Pages: 86-97

    • DOI

      10.3390/genes7100086

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Prediction of developmental chemical toxicity based on gene networks of human embryonic stem cells.2016

    • Author(s)
      Yamane J, Aburatani S, Imanishi S, Akanuma H, Nagano R, Kato T, Sone H, Ohsako S, Fujibuchi W.
    • Journal Title

      Nucleic Acids Research

      Volume: 44(12) Issue: 12 Pages: 5515-5528

    • DOI

      10.1093/nar/gkw450

    • NAID

      120005763870

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Effects of Chronic Low-Dose Radiation on Human Neural Progenitor Cells.2016

    • Author(s)
      Katsura M, Cyou-Nakamine H, Zen Q, Zen Y, Nansai H, Amagasa S, Kanki Y, Inoue T, Kaneki K, Taguchi A, Kobayashi M, Kaji T, Kodama T, Miyagawa K, Wada Y, Akimitsu N, Sone H.
    • Journal Title

      Sci Rep.

      Volume: 6 Issue: 1 Pages: 20027-20027

    • DOI

      10.1038/srep20027

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Prediction of Developmental Chemical Toxicity based on Gene Networks of Human Embryonic Stem Cells2016

    • Author(s)
      Yamane J, Aburatani S, Imanishi S, Akanuma H, Nagano R, Kato T, Sone H, Ohsako S and Fujibuchi W
    • Journal Title

      Nucleic Acids Research

      Volume: 未定

    • NAID

      120005763870

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Ultra-Deep Bisulfite Sequencing to Detect Specific DNA Methylation Patterns of Minor Cell Types in Heterogeneous Cell Populations: An Example of the Pituitary Tissue2016

    • Author(s)
      Arai Y, Fukukawa H, Atozi T, Matsumoto S, Hanazono Y, Nagashima H, and Ohgane J.
    • Journal Title

      PLoS One

      Volume: 11 Issue: 1 Pages: e0146498-e0146498

    • DOI

      10.1371/journal.pone.0146498

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] A genetically encoded FRET probe to detect intranucleosomal histone H3K9 or H3K14 acetylation using BRD4, a BET family member2016

    • Author(s)
      Nakaoka, S., Sasaki, K., Ito, A., Nakao, Y., and Yoshida, M.
    • Journal Title

      ACS Chem. Biol.

      Volume: 11 Issue: 3 Pages: 729-733

    • DOI

      10.1021/cb501046t

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Putative Epimutagens in Maternal Peripheral and Cord Blood Samples Identified Using Human Induced Pluripotent Stem Cells.2015

    • Author(s)
      Arai Y, Hayakawa K, Arai D, Ito R, Iwasaki Y, Saito K, Akutsu K, Takatori S, Ishii R, Hayashi R, Izumi S, Sugino N, Kondo F, Horie M, Nakazawa H, Makino T, Hirosawa M, Shiota K, Ohgane J.
    • Journal Title

      Biomed Res Int.

      Volume: 2015 Pages: 1-13

    • DOI

      10.1155/2015/876047

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] An epigenetic regulatory element of the Nodal gene in the mouse and human genomes2015

    • Author(s)
      Daisuke Arai, Koji Hayakawa, Jun Ohgane, Mitsuko Hirosawa, Yoichi Nakao, Satoshi Tanaka, Kunio Shiota
    • Journal Title

      Mechanisms of Development

      Volume: 136 Pages: 143-154

    • DOI

      10.1016/j.mod.2014.12.003

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] Air pollution exhibits multiple key characteristics of carcinogens2019

    • Author(s)
      曽根秀子
    • Organizer
      IUTOX
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Molecular characterizations of developing male germ cells and GS cell lines by single cell transcriptome analysis2019

    • Author(s)
      阿部訓也
    • Organizer
      The 4th URICAS Symposium, Penang
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Ectopic expression of Ctcfl/Boris in multipotent mouse embryoid body affects the embryonic differentiation program in vitro.2019

    • Author(s)
      Maisarah Ab Samad, Shinnosuke Suzuki, Kuniya Abe, Daruliza Kernain Mohd Azman, Shaharum Shamsuddin
    • Organizer
      International Congress on ageing, Penang
    • Related Report
      2018 Annual Research Report
    • Int'l Joint Research
  • [Presentation] エピジェネティック毒性の検出シスムに関する開発研究2018

    • Author(s)
      曽根秀子
    • Organizer
      第45回日本毒性学会学術年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 生殖・発生毒性とエピジェネティック制御2018

    • Author(s)
      曽根秀子
    • Organizer
      第35回生殖・発生毒性学東京セミナー
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] 多能性幹細胞を用いたエピジェネティック毒性物質スクリーニング2018

    • Author(s)
      大塚 悟史、南齋 ひろ子、伊藤 智彦、阿部 訓也、中尾 洋一、曽根 秀子
    • Organizer
      第45回日本毒性学会学術年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 多能性幹細胞を用いたエストロゲン様物質のエピジェネティック毒性に関する研究2018

    • Author(s)
      大塚 悟史、南齋 ひろ子、伊藤 智彦、中尾 洋一、曽根 秀子
    • Organizer
      第21回環境ホルモン学会研究発表会
    • Related Report
      2018 Annual Research Report
  • [Presentation] シングルセルRNA-Seq解析によるナイーブ型からプライム型への多能性幹細胞の変換過程における転写動態の解明2018

    • Author(s)
      田夛祐喜、浦大樹、Michael Boettcher、鈴木伸之介、Piero Carninci、 阿部訓也
    • Organizer
      日本遺伝学会第90回大会
    • Related Report
      2018 Annual Research Report
  • [Presentation] シングルセルRNA-Seqを用いたオスES細胞プライム化過程における遺伝子発現動態解析2018

    • Author(s)
      田夛祐喜、阿部訓也
    • Organizer
      第41回日本分子生物学会年会
    • Related Report
      2018 Annual Research Report
  • [Presentation] シングルセル技術を用いた多能性細胞・生殖細胞の分化遷移過程とそのエピゲノム制御の解析2018

    • Author(s)
      阿部訓也
    • Organizer
      生殖細胞のエピゲノムダイナミクスとその制御 成果取りまとめ公開シンポジウム
    • Related Report
      2018 Annual Research Report
  • [Presentation] DNA methylation as an epigenetic modifier of the FBN1 Transcription2018

    • Author(s)
      Ohgane J, Arai Y, Takeuchi K, Okazaki N, Yashima S, Nakano K, Umeyama K, Nagashima H
    • Organizer
      10th International Research Symposium on Marfan Syndrome and Related Disorders
    • Related Report
      2018 Annual Research Report
  • [Presentation] アリルごとのDNAメチル化に着目したハプロ不全優性遺伝病の発症機序解明に向けた新たな試み:ブタフィブリリン1 (FBN1)を例として2018

    • Author(s)
      新井良和、梅山一大、岡崎なつみ、隠地健斗、福川斐昭、高澤健、西野光一郎、長嶋比呂志、大鐘潤
    • Organizer
      第111回 日本繁殖生物学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] 神経前駆細胞分化の転写ネットワークに低線量放射線が与える変化と影響2018

    • Author(s)
      桂真理、戸澤英人、南斎ひろ子、小野久子、小林美佳、田口明糸、石川夕記子、興梠貴英、曽根秀子、和田洋一郎
    • Organizer
      第61回 日本放射線影響学会
    • Related Report
      2018 Annual Research Report
  • [Presentation] Effects of low dose radiation on developing human retinal ganglion cells from induced pluripotent stem cells2018

    • Author(s)
      桂真理
    • Organizer
      Stem Cell Congress 2018
    • Related Report
      2018 Annual Research Report
  • [Presentation] ヒト未分化細胞を用いた化合物安全性評価予測の実際2018

    • Author(s)
      藤渕航
    • Organizer
      第25回HAB研究機構学術年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] scChemRISC: A Japanese consortium for sharing chemical risk information assessed by gene networks of human stem cells and machine learning2018

    • Author(s)
      藤渕航
    • Organizer
      OPENTOX ASIA 2018
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] Deep learning approaches for toxicity prediction of drugs with small-scale gene expression data2018

    • Author(s)
      Hiroki Takahashi, Junko Yamane, Wataru Fujibuchi
    • Organizer
      OPENTOX ASIA 2018
    • Related Report
      2018 Annual Research Report
  • [Presentation] 幹細胞を用いた化学物質リスク情報共有化コンソーシアム(scChemRISC)の活動2018

    • Author(s)
      藤渕航
    • Organizer
      第45回日本毒性学会学術年会
    • Related Report
      2018 Annual Research Report
    • Invited
  • [Presentation] DNAメチル化によるブタMSTN遺伝子の組織特異的発現調節機構の解析2018

    • Author(s)
      隠地健斗、新井良和、長嶋比呂志、大鐘潤
    • Organizer
      第124回 日本畜産学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] DNAメチル化によるブタMSTN遺伝子の組織特異的発現調節機構の解析2018

    • Author(s)
      茂田遼平、新井良和、松成ひとみ、長嶋比呂志、大鐘潤
    • Organizer
      第124回 日本畜産学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 幹細胞を用いた化学物質リスク情報共有化コンソーシアムの紹介2018

    • Author(s)
      藤渕航
    • Organizer
      バイオチップコンソーシアム(JMAC)主催第103回ワーキンググループ会議
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] iPS細胞から分化中の網膜神経節細胞に対する各種ストレスの影響2017

    • Author(s)
      桂真理、南斎ひろ子、曽根秀子
    • Organizer
      第121回日本眼科学会総会
    • Place of Presentation
      東京国際フォーラム(東京)
    • Year and Date
      2017-04-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] ヒトES細胞を用いた高精度の化合物毒性予測システムの構築2017

    • Author(s)
      山根順子、油谷幸代、今西哲、赤沼宏美、加藤毅、曽根秀子、大迫誠一郎、藤渕航
    • Organizer
      日本薬学会第137年会
    • Place of Presentation
      仙台国際センター(宮城)
    • Year and Date
      2017-03-24
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] アリルごとのDNAメチル化状態に注目したエピジェネティクス解析の新たな試み2017

    • Author(s)
      大鐘潤、新井良和
    • Organizer
      日本農芸化学会年会
    • Place of Presentation
      京都女子大学(京都)
    • Year and Date
      2017-03-19
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Technology development for gene function analysis by CRISPR/Cas9 system2017

    • Author(s)
      Shinnosuke Suzuki and Kuniya Abe
    • Organizer
      4th World Congress of Reproductive Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Comprehensive single-cell analyses on developmental transitions in mouse pluripotent stem cells.2017

    • Author(s)
      Buttcher M, Ura H, Tada Y, Suzuki S, Carninci P, Abe K
    • Organizer
      Single Cell Genomics 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 2つの異なる多能性幹細胞状態を分けるエピジェネティックバリアー形成における新規DNAメチル化の役割2017

    • Author(s)
      阿部訓也
    • Organizer
      RIKEN・MARC・KMPC Mouse Workshop
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 2つの多能性状態であるナイーブ状態とプライム状態を分けるエピジェネティックバリアーにおけるDNAメチル化の役割2017

    • Author(s)
      浦大樹、鈴木伸之介、田夛祐喜、阿部訓也
    • Organizer
      日本遺伝学会第89回大会
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] iPS細胞から分化中の網膜神経節細胞に対する各種ストレスの影響 Effects of irradiations on proliferation and differentiation of retinal ganglion cells from induced pluripotent stem cells2017

    • Author(s)
      桂 真理、南齋ひろ子、曽根秀子
    • Organizer
      第121回日本眼科学会学術総会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 転写制御を介して低線量放射線が網膜神経節細胞の分化に与える影響2017

    • Author(s)
      桂 真理、戸澤英人、南斎ひろ子、小野久子、田口明糸、興絽貴英、曽根秀子、和田洋一郎
    • Organizer
      第60回 日本放射線影響学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] iPS細胞から網膜神経節細胞への分化に対する放射線影響 Radiation effects on differentiation of induced pluripotent stem cells to retinal ganglion cells2017

    • Author(s)
      桂 真理、戸澤英人、南齋ひろ子、小野久子、田口明糸、小林美佳、興梠貴英、高橋政代、和田洋一郎、曽根秀子
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phenotypic variation in the cloned pigs with heterozygous fibrillin-1 mutation.2017

    • Author(s)
      Kazuhiro Umeyama, Yoshikazu Arai, Kazuaki Nakano, Tooru Fukuda, Ikuma Umeki, Ayuko Uchikura, Yuri Kasai, Hitomi Matsunari, Masaki Nagaya, Masahito Watanabe, Jun Ohgane and Hiroshi Nagashima
    • Organizer
      4th World Congress of Reproductive Biology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of enhanced single-cell RRBS method toward 3D tissue reconstruction2017

    • Author(s)
      Junko Yamane, Tomoya Mori, Nobuko Taniyama, Kenta Kobayashi, Yoshiko Okamura, Wataru Fujibuchi
    • Organizer
      The 12th International Workshop on Advanced Genomics
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Development of Enhanced Reduced Representation Bisulfite Sequencing Method for Single-cell Methylome Analysis2016

    • Author(s)
      Yamane J, Mori T, Taniyama N, Kobayashi K, Fujibuchi W.
    • Organizer
      2ND CHALLENGES IN COMPUTATIONAL BIOLOGY: GENE EXPRESSION DATA ANALYSIS
    • Place of Presentation
      Institute of Molecular Biology(ドイツ、マインツ)
    • Year and Date
      2016-12-02
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Stem cell informatics: learning gene networks in human embryonic stem cells for predicting chemical effects on babies2016

    • Author(s)
      Fujibuchi W
    • Organizer
      2ND CHALLENGES IN COMPUTATIONAL BIOLOGY: GENE EXPRESSION DATA ANALYSIS
    • Place of Presentation
      Institute of Molecular Biology(ドイツ、マインツ)
    • Year and Date
      2016-12-01
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 研究の全体像 :ベイジアンネットワークと機械学習の組み合わせによる高精度化2016

    • Author(s)
      藤渕 航
    • Organizer
      CBI学会2016年大会
    • Place of Presentation
      タワーホール船堀(東京)
    • Year and Date
      2016-10-27
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 変異型fibrillin-1遺伝子を有するブタの上行大動脈の病理解析2016

    • Author(s)
      梅山一大、新井良和、中野和明、内倉鮎子、渡邊将人、松成ひとみ、齋藤正寛、木村徳宏、渡邉航太、堀内圭輔、北城雅照、有馬好美、サンペトラオルテア、小崎健次郎、佐谷秀行、松本守雄、長屋昌樹、大鐘潤、長嶋比呂志
    • Organizer
      日本脈管学会
    • Place of Presentation
      ホテル日航奈良(奈良)
    • Year and Date
      2016-10-13
    • Related Report
      2016 Annual Research Report
  • [Presentation] Germline Stem (GS)細胞における複数遺伝子の高効率機能解析技術の開発2016

    • Author(s)
      Suzuki S, Abe K
    • Organizer
      第109回日本繁殖生物学会大会
    • Place of Presentation
      麻布大学(神奈川)
    • Year and Date
      2016-09-16
    • Related Report
      2016 Annual Research Report
  • [Presentation] Comprehensive study on naive-to-primed stem cell conversion process by integration of single-cell transcriptomics and epigenomic analysis2016

    • Author(s)
      Ura H, Bottcher M, Suzuki S, Carninci P, Abe K
    • Organizer
      QBiC Symposium 2016
    • Place of Presentation
      理化学研究所生命システム研究センター(大阪)
    • Year and Date
      2016-09-06
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Visualization tools for epigenomics2016

    • Author(s)
      Abe K
    • Organizer
      The 5th RIKEN BRC - Nanjing University MARC Mouse Resource Workshop
    • Place of Presentation
      理化学研究所バイオリソースセンター(茨城)
    • Year and Date
      2016-07-25
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] エピジェネティック毒性物質の検出システムの開発2016

    • Author(s)
      曽根 秀子、阿部 訓也、中尾 洋一、大鐘 潤、桂 真理、藤渕 航、五十嵐 勝秀
    • Organizer
      第43回日本毒性学会学術年会
    • Place of Presentation
      ウインクあいち(愛知)
    • Year and Date
      2016-06-30
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] 第372回CBI学会講演会「システムバイオロジーの最新動向」2016

    • Author(s)
      藤渕 航
    • Organizer
      第372回CBI学会講演会
    • Place of Presentation
      東京大学山上会館(東京)
    • Year and Date
      2016-05-24
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Enhanced-scRRBS for Massive Single Cell Methylome Analysis Towards in silico 3D-Reconstructions of Mouse and Human Tissues.2015

    • Author(s)
      Yamane J, Kobayashi K, Taniyama N, FUJIBUCHI W.
    • Organizer
      2015環太平洋国際化学会議(PACIFICHEM2015)
    • Place of Presentation
      Honolulu, Hawaii, USA
    • Year and Date
      2015-12-18
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] New approach to study histone modification changes controlling biological phenomena by small molecules2015

    • Author(s)
      Nakao Y, Arai D, Kina Y, Kataoka R, Hayashi-Takanaka Y, Kimura H.
    • Organizer
      2015環太平洋国際化学会議(PACIFICHEM2015)
    • Place of Presentation
      Honolulu, Hawaii, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Marine natural products that control a specific set of histone modifications2015

    • Author(s)
      Arai D, Sakuma C, Hayashi-Takanaka Y, Kimura H, Nakao Y.
    • Organizer
      2015環太平洋国際化学会議(PACIFICHEM2015)
    • Place of Presentation
      Honolulu, Hawaii, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Isolation and structure elucidation of an active compound affecting histone modification from the marine sponge2015

    • Author(s)
      Machida K, Ishibashi N, Kataoka K, Arai D, Hayashi-Takanaka Y, Kimura H, Fusetani N, Nakao Y.
    • Organizer
      2015環太平洋国際化学会議(PACIFICHEM2015)
    • Place of Presentation
      Honolulu, Hawaii, USA
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] ヒト慢性骨髄性白血病由来細胞株MB-1のcobblestone area形成に対する海洋天然化合物の活性評価2015

    • Author(s)
      下本 哲平、新井大祐、永井麻美、加勢友香梨、浅野茂隆、中尾洋一
    • Organizer
      第38回 日本分子生物学会年会
    • Place of Presentation
      神戸
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] 基調講演『海洋毒・海洋生理活性物質の探索研究へのMSの応用』2015

    • Author(s)
      中尾洋一
    • Organizer
      第63回 質量分析総合討論会
    • Place of Presentation
      つくば
    • Year and Date
      2015-06-17
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] Effects of Low- Dose Radiation From Cs-137 on Normal Human Cell2015

    • Author(s)
      Nobuyoshi Akimitsu, Mari Katsura, Azusa Ishibashi, Hiromasa Nakamine, Kazuyuki Tao, Toshiyuki Kaji, Hideko Sone, Tatsuhiko Kodama, Kiyoshi Miyagawa, Youichirou Wada
    • Organizer
      ICRR 2015 (15th International Congress of Radiation Research)
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2015-05-26
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Effects of Low- and Middle- Dose Rate Radiation on Human Neural Precursor Cells2015

    • Author(s)
      Mari Katsura, Hiromasa Nakamine, Hideko Sone, Shota Amagasa, Toshiyuki Kaji, Kiyoshi Miyagawa, Youichirou Wada, Nobuyoshi Akimitsu
    • Organizer
      ICRR 2015 (15th International Congress of Radiation Research)
    • Place of Presentation
      Kyoto, Japan
    • Year and Date
      2015-05-26
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Patent(Industrial Property Rights)] 発明の名称:高血糖によるエピゲノム異常の抑制のための方法及び組成物2015

    • Inventor(s)
      中尾洋一、新井大祐、塩田邦郎、早川晃司
    • Industrial Property Rights Holder
      中尾洋一、新井大祐、塩田邦郎、早川晃司
    • Industrial Property Rights Type
      特許
    • Industrial Property Number
      2015-177459
    • Filing Date
      2015-09-09
    • Related Report
      2015 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2020-03-30  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi