Integrative sensory evolution in primates revealed by population genetic analysis of olfactory, taste, and color vision receptor genes
Project/Area Number |
15H02421
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Research Category |
Grant-in-Aid for Scientific Research (A)
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Allocation Type | Single-year Grants |
Section | 一般 |
Research Field |
Physical anthropology
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Research Institution | The University of Tokyo |
Principal Investigator |
KAWAMURA Shoji 東京大学, 大学院新領域創成科学研究科, 教授 (40282727)
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Co-Investigator(Kenkyū-buntansha) |
今井 啓雄 京都大学, 霊長類研究所, 准教授 (60314176)
手島 康介 九州大学, 理学研究院, 助教 (20447593)
太田 博樹 北里大学, 医学部, 准教授 (40401228)
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Co-Investigator(Renkei-kenkyūsha) |
TOUHARA Kazushige 東京大学, 大学院農学生命科学研究科, 教授 (00280925)
SUZUKI Yutaka 東京大学, 大学院新領域創成科学研究科, 教授 (40323646)
HASEBE Mitsuyasu 基礎生物学研究所, 生物進化研究部門, 教授 (40237996)
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Research Collaborator |
MATSUMOTO Akiko
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Project Period (FY) |
2015-04-01 – 2018-03-31
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Project Status |
Completed (Fiscal Year 2017)
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Budget Amount *help |
¥40,430,000 (Direct Cost: ¥31,100,000、Indirect Cost: ¥9,330,000)
Fiscal Year 2017: ¥12,090,000 (Direct Cost: ¥9,300,000、Indirect Cost: ¥2,790,000)
Fiscal Year 2016: ¥12,090,000 (Direct Cost: ¥9,300,000、Indirect Cost: ¥2,790,000)
Fiscal Year 2015: ¥16,250,000 (Direct Cost: ¥12,500,000、Indirect Cost: ¥3,750,000)
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Keywords | 霊長類 / 感覚受容遺伝子 / 野生集団 / 遺伝的多型 / 適応進化 / 国際情報交換 / 分子・遺伝 / 感覚進化 / 色覚 / ケミカルセンス |
Outline of Final Research Achievements |
Primates are generally regarded as vision-oriented animals. However, this notion is questioned by recent studies and requires further investigation. New World monkeys (NWMs) are particularly suitable for understanding the interplay of different senses in evolutionary and ecological contexts because of their diversity in color vision and diets. Here, by employing targeted capture and massively parallel (Next Generation) sequencing methods, we studied the entire gene repertoire of olfactory receptors (ORs) as well as bitter (TAS2Rs) and umami/sweet (TAS1Rs) taste receptors from NWMs with diverse color vision types and feeding habits. The number of intact and defective OR genes appeared to differ only slightly among taxa, whereas genetic composition differed considerably among species by repeated gain and loss of OR genes throughout phylogeny. These results depict a feature of active turnaround of gene contents in the evolution of primate chemical sensors.
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Report
(4 results)
Research Products
(99 results)
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[Journal Article] The allele frequency of ALDH2*Glu504Lys and ADH1B*Arg47His for the Ryukyu islanders and their history of expansion among East Asians2017
Author(s)
Koganebuchi, K., Haneji, K., Toma, T., Joh, K., Soejima, H., Fujimoto, K., Ishida, H., Ogawa, M., Hanihara, T., Harada, S., Kawamura, S. and *Oota, H.
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Journal Title
American Journal of Human Biology
Volume: 29
Issue: 2
Pages: 1-14
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
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[Journal Article] Howler monkey foraging ecology suggests convergent evolution of routine trichromacy as an adaptation for folivory2017
Author(s)
*Melin, A. D., Khetpal, V., Matsushita, Y., Zhou, K., Campos, F. A., Welker, B. and Kawamura, S.
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Journal Title
Ecology and Evolution
Volume: 7
Issue: 5
Pages: 1421-1434
DOI
Related Report
Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
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[Journal Article] Female sociality and sexual conflict shape offspring survival in a Neotropical primate2017
Author(s)
*Kalbitzer, U., Bergstrom, M. L., Carnegie, S. D., Wikberg, E. C., Kawamura, S., Campos, F. A., Jack, K. M. and Fedigan, L. M.
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Journal Title
Proceedings of the National Academy of Sciences of the United States of America
Volume: 114
Issue: 8
Pages: 1892-1897
DOI
Related Report
Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
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[Journal Article] Inbreeding avoidance and female mate choice shape reproductive skew in capuchin monkeys (Cebus capucinus imitator)2017
Author(s)
*Wikberg, E. C., Jack, K. M., Fedigan, L. M., Campos, F. A., Yashima, A. S., Bergstrom, M. L., Hiwatashi, T., Kawamura, S.
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Journal Title
Molecular Ecology
Volume: 26
Issue: 2
Pages: 653-667
DOI
Related Report
Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
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[Journal Article] Variation in ligand responses of the bitter taste receptors TAS2R1 and TAS2R4 among New World monkeys.2016
Author(s)
K. Tsutsui, M. Otoh, K. Sakurai, N. Suzuki-Hashido, T. Hayakawa, T. Misaka, Y. Ishimaru, F. Aureli, A. D. Melin, *S. Kawamura, *H. Imai.
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Journal Title
BMC Evolutionary Biology
Volume: 16
Issue: 1
Pages: 208-208
DOI
NAID
Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Spectral sensitivity of guppy visual pigments reconstituted in vitro to resolve association of opsins with cone cell types2016
Author(s)
*Kawamura, S., Kasagi, S., Kasai, D., Tezuka, A., Shoji, A., Takahashi, A., Imai, H. and Kawata, M.
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Journal Title
Vision Research
Volume: 127
Pages: 67-73
DOI
Related Report
Peer Reviewed / Open Access / Acknowledgement Compliant
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[Journal Article] Euarchontan opsin variation brings new focus to primate origins2016
Author(s)
*Melin, A. D., Wells, K., Moritz, G. L., Kistler, L., Orkin, J. D., Timm, R. M., Bernard, H., Lakim, M. B., Perry, G. H., Kawamura, S. and *Dominy, N. J.
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Journal Title
Molecular Biology and Evolution, 33 (4):
Volume: 33
Issue: 4
Pages: 1029-1041
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Related Report
Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Amino acid residues of bitter taste receptor TAS2R16 that determine sensitivity in primates to b-glycosides2016
Author(s)
H. Imai, N. Suzuki-Hashido, Y. Ishimaru, T. Sakurai, L. Yin, W. Pan, M. Ishiguro, K. Masuda, K. Abe, T. Misaka, and H. Hirai
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Journal Title
Biophysics and Physicobiology
Volume: 未定
Related Report
Peer Reviewed / Int'l Joint Research
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[Journal Article] Retinoic acid signaling regulates differential expression of the tandemly-duplicated long wavelength-sensitive cone opsin genes in zebrafish2015
Author(s)
5.Mitchell, D. M., Stevens, C. B., Frey, R. A., Hunter, S. S., Ashino, R., Kawamura, S. and Stenkamp, D. L.
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Journal Title
PLoS Genetics
Volume: 11
Issue: 8
Pages: e1005483-e1005483
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Peer Reviewed / Open Access / Int'l Joint Research
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[Journal Article] Rapid Expansion of Phenylthiocarbamide Non-Tasters among Japanese Macaques.2015
Author(s)
Suzuki-Hashido, N., Hayakawa, T., Matsui, A., Go, Y., Ishimaru, Y., Misaka, T., Abe, K., Hirai, H., Satta, Y., and Imai, H.
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Journal Title
PLoS ONE
Volume: 22
Issue: 7
Pages: e0132016-e0132016
DOI
NAID
Related Report
Peer Reviewed / Open Access
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[Presentation] Red-green colour vision increases fruit intake rates of wild capuchins (Cebus capucinus imitator)2017
Author(s)
Melin, A. D., Chiou, K. L., Walco, E. R., Kawamura, S. and Fedigan, L. M.
Organizer
Canadian Association for Physical Anthropology 45th Annual Meeting, Matrix Hotel, Edmonton, Alberta, Canada, October 25th - 28th
Related Report
Int'l Joint Research
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[Presentation] Divergent evolution of olfactory and taste receptor repertoire in New World monkeys with diverse color vision types and feeding habits2017
Author(s)
Kawamura, S., Naoi, T., Hayashi, M., Ashino, R., Niimura, Y., Touhara, K., Imai, H., Veilleux, C. C., Garrett, E. C., Melin, A. D.
Organizer
Annual Meeting of the Society for Molecular Biology and Evolution 2017 (SMBE 2017), JW Marriott hotel, Austin, USA, July 2nd - 6th
Related Report
Int'l Joint Research
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[Presentation] Functional and behavioral analysis of primate bitter and sweet taste receptors2017
Author(s)
Hiroo Imai, Nami Suzuki-Hashido, Emiko Nishi, Takashi Hayakawa, Hirohisa Hirai, Laurentia Purba, Kanthi Widayati, Bambang Suryobroto
Organizer
The 16th International Symposium on Molecular and Neural Mechanisms of Taste and Olfactory Perception, November 3-4, 2017, Fukuoka
Related Report
Int'l Joint Research / Invited
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[Presentation] Behavioral ecology and sensory genomics of white-faced capuchin monkeys (Cebus capucinus) in a comparative context2016
Author(s)
Melin, A. D., Orkin, J. D., Garrett, E. C., Montague, M. J., Bankoff, R., Perry, G., Warren, W. C. and Kawamura, S.
Organizer
Joint meeting of the International Primatological Society and the American Society of Primatologists
Place of Presentation
Navy Pier, Chicago, USA
Year and Date
2016-08-21
Related Report
Int'l Joint Research
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[Presentation] Parallel dispersal and its effect on the kin composition of wild white-faced capuchin (Cebus capucinus) groups in Costa Rica2016
Author(s)
Wikberg, E. C., Campos, F. A., Sato, A., Bergstrom, M. L., Hiwatashi, T., Jack, K. M., Fedigan, L. M. and Kawamura, S.
Organizer
Joint meeting of the International Primatological Society and the American Society of Primatologists
Place of Presentation
Navy Pier, Chicago, USA
Year and Date
2016-08-21
Related Report
Int'l Joint Research
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[Presentation] Infant survival in relation to female social bonds and alpha male replacements in wild white-faced capuchin monkeys2016
Author(s)
Kalbitzer, U., Bergstrom, M. L., Carnegie, S. D., Kawamura, S., Wikberg, E. C., Campos, F. A. and Fedigan, L. M.
Organizer
Joint meeting of the International Primatological Society and the American Society of Primatologists
Place of Presentation
Navy Pier, Chicago, USA
Year and Date
2016-08-21
Related Report
Int'l Joint Research
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[Presentation] Color vision and age affect fruit foraging rates of wild white-faced capuchins (Cebus capucinus) in sector Santa Rosa2016
Author(s)
Walco, E. R., Chiou, K. L., Kawamura, S., Fedigan, L. M. and Melin, A. D.
Organizer
Joint meeting of the International Primatological Society and the American Society of Primatologists
Place of Presentation
Navy Pier, Chicago, USA
Year and Date
2016-08-21
Related Report
Int'l Joint Research
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[Presentation] 野生ジャワルトンの苦味受容体遺伝子の多様性解析2016
Author(s)
鈴木―橋戸南美, Takashi Hayakawa, Laurentia Henrieta Permita Sari Purba, Sarah Nila, Kanthi Arum Widayati, Bambang Suryobroto, Hiroo Imai
Organizer
第60回プリマーテス研究会
Place of Presentation
犬山市
Year and Date
2016-01-30
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[Presentation] Howler monkey foraging ecology suggests convergent evolution of routine trichromacy as an adaptation for folivory2015
Author(s)
Khetpal, V., Welker, B., Matsushita, Y., Kawamura, S. and Melin, A. D.
Organizer
Midwest Primate Interest Group Conference
Place of Presentation
Fontbonne University, St. Louis, Missouri
Year and Date
2015-10-09
Related Report
Int'l Joint Research
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[Presentation] Sensory ecology of wild capuchins: Integrating fruit signals, nutrition, and foraging behavior2015
Author(s)
Melin, A. D., Shirasu, M., Matsushita, Y., Venkataraman, V., Rothman, J. M., Touhara, K. and Kawamura, S.
Organizer
The 17th Annual Meeting of the Society for Evolutionary Studies, Japan: Symposium "Sensory genetics, ecology and evolution of primates"
Place of Presentation
Chuo University Korakuen Campus, Tokyo
Year and Date
2015-08-20
Related Report
Int'l Joint Research
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[Presentation] Variation of absorption spectrum and gene expression pattern of red opsins under different light environments and its effect on behavioral spectral sensitivity in guppies, Poecilia reticulata2015
Author(s)
Sakai, Y., Kasagi, S., Kawamura, S., Ohtsuki, H. and Kawata, M.
Organizer
15th congress of the European Society for Evolutionary Biology
Place of Presentation
The University of Lausanne, Lausanne, Switzerland
Year and Date
2015-08-10
Related Report
Int'l Joint Research
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[Presentation] Prevalence of dichromacy and anomalous trichromacy in a wild population of spider monkeys (Ateles geoffroyi) in Yucatan, Mexico2015
Author(s)
Pablo-Rodríguez, M., Matsushita, Y., Schaffner, C. M., Aureli, F., Hernández-Salazar, L. T. and Kawamura, S.
Organizer
The 5th Mexican Congress of Primatology
Place of Presentation
USBI, Boca del Río, Veracruz, Mexico
Year and Date
2015-06-29
Related Report
Int'l Joint Research
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