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Directed evolution of squalene-converting biosynthetic pathways

Research Project

Project/Area Number 15H04189
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biofunction/Bioprocess
Research InstitutionChiba University

Principal Investigator

Umeno Daisuke  千葉大学, 大学院工学研究院, 准教授 (00400812)

Co-Investigator(Kenkyū-buntansha) 河合 繁子  千葉大学, 大学院工学研究院, 助教 (40638920)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥17,810,000 (Direct Cost: ¥13,700,000、Indirect Cost: ¥4,110,000)
Fiscal Year 2017: ¥3,770,000 (Direct Cost: ¥2,900,000、Indirect Cost: ¥870,000)
Fiscal Year 2016: ¥3,900,000 (Direct Cost: ¥3,000,000、Indirect Cost: ¥900,000)
Fiscal Year 2015: ¥10,140,000 (Direct Cost: ¥7,800,000、Indirect Cost: ¥2,340,000)
Keywords合成生物学 / 進化分子工学 / スクリーニング / トリテルペン / オキシドスクアレン / 環化酵素 / 応用微生物 / バイオテクノロジー / 生物・生体工学 / 酵素反応 / 生体分子 / 微生物 / 生体機能利用 / 進化 / スクアレン / ホペン / スクアラン / ライブラリ / セレクション
Outline of Final Research Achievements

All of the > 30,000 trierpenoinds are synthesized via squalene. To start accessing those structurally and functionally diverse compounds, we have developed a novel screening system to visualize squalene consumption. By using this as a screening principle, we have identified activity mutants of squalene cyclizing enzymes, enabling efficient microbial synthesis of cyclic triterpenoids. By combining these mutant enzymes with pathways for squalene-like molecules, we succeeded in establishing pathways toward numbers of novel compounds that have not been previously reported.

Report

(2 results)
  • 2017 Final Research Report ( PDF )
  • 2015 Annual Research Report
  • Research Products

    (8 results)

All 2016 2015

All Journal Article (4 results) (of which Peer Reviewed: 2 results,  Open Access: 2 results) Presentation (4 results) (of which Invited: 4 results)

  • [Journal Article] Evolutionary design of choline-inducible and choline-repressive T7-based induction systems.2016

    • Author(s)
      Ike K, Arasawa Y, Koizumi S, Mihashi S, Kawai-Noma S, Kyoichi S, Umeno D
    • Journal Title

      ACS Synthetic Biology

      Volume: 4 Issue: 12 Pages: 1352-1360

    • DOI

      10.1021/acssynbio.5b00107

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] 香料の合成生物学2016

    • Author(s)
      古林真衣子,梅野太輔
    • Journal Title

      香料

      Volume: 267 Pages: 21-29

    • NAID

      40020781828

    • Related Report
      2015 Annual Research Report
  • [Journal Article] テルペノイド酵素の進化デザイン2016

    • Author(s)
      岩嵜美希,梅野太輔
    • Journal Title

      化学と生物

      Volume: 9

    • Related Report
      2015 Annual Research Report
  • [Journal Article] Production of squalene by squalene synthases and their truncated mutants in Escherichia coli.2015

    • Author(s)
      Katabami, A, Li, L., Iwasaki, M., Furubayashi, M., Saito, K., Umeno, D
    • Journal Title

      J. Bioscience Bioengin

      Volume: 119 Issue: 2 Pages: 165-171

    • DOI

      10.1016/j.jbiosc.2014.07.013

    • NAID

      110009922576

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] テルペノイド生合成経路の進化分子工学2016

    • Author(s)
      梅野太輔
    • Organizer
      農芸化学会2016大会シンポジウム
    • Place of Presentation
      札幌
    • Year and Date
      2016-03-28
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 進化工学による非天然カロチノイド創製2016

    • Author(s)
      梅野太輔
    • Organizer
      日本学術振興会産学協力研究委員会「地球環境・食糧・資源のための植物バイオ第160委員会」
    • Place of Presentation
      京都
    • Year and Date
      2016-03-04
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 人工代謝経路「進化」による非天然カロテノイドのシリーズ生産2015

    • Author(s)
      梅野太輔
    • Organizer
      第67回 日本生物工学会
    • Place of Presentation
      鹿児島
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 遺伝子制御ネットワークの進化デザイン2015

    • Author(s)
      梅野太輔
    • Organizer
      藍藻ゲノム研究会
    • Place of Presentation
      東京大学
    • Year and Date
      2015-07-25
    • Related Report
      2015 Annual Research Report
    • Invited

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Published: 2015-04-16   Modified: 2022-11-04  

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