• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Comprehensive study of chlorophyll metabolism based on enzyme identification

Research Project

Project/Area Number 15H04381
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant molecular biology/Plant physiology
Research InstitutionHokkaido University

Principal Investigator

TANAKA Ayumi  北海道大学, 低温科学研究所, 特任教授 (10197402)

Co-Investigator(Renkei-kenkyūsha) TAKABAYASHI ATSUSHI  北海道大学, 低温科学研究所, 助教 (90546417)
ITO HISASHI  北海道大学, 低温科学研究所, 助教 (50596608)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥18,070,000 (Direct Cost: ¥13,900,000、Indirect Cost: ¥4,170,000)
Fiscal Year 2017: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2016: ¥6,110,000 (Direct Cost: ¥4,700,000、Indirect Cost: ¥1,410,000)
Fiscal Year 2015: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Keywords色素体機能 / 光合成 / クロロフィル / 代謝
Outline of Final Research Achievements

Despite its importance, Mg-dechelatase that catalyzes the first step of chlorophyll degradation pathway was not identified. In this study, we found that Mg-dechelatase is encoded by SGR gene and the dechelating activity was successfully measured with the recombinant protein expressed in E. coli. We also found that substrate specificity differs between SGR1 and SGRL. By these studies, all major enzymes of the chlorophyll metabolic pathway were finally identified. Furthermore, it was revealed that SGR can catalyze not only free chlorophyll but also chlorophyll bound to protein, thus playing a central role in the degradation of chlorophyll-binding proteins and photosystems.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (54 results)

All 2018 2017 2016 2015 Other

All Journal Article (15 results) (of which Int'l Joint Research: 2 results,  Peer Reviewed: 15 results,  Open Access: 7 results,  Acknowledgement Compliant: 7 results) Presentation (35 results) (of which Int'l Joint Research: 7 results,  Invited: 7 results) Book (1 results) Remarks (3 results)

  • [Journal Article] Impairment of Lhca4, a subunit of LHCI, causes high accumulation of chlorophyll and the stay-green phenotype in rice2018

    • Author(s)
      Yamatani Hiroshi、Kohzuma Kaori、Nakano Michiharu、Takami Tsuneaki、Kato Yusuke、Hayashi Yoriko、Monden Yuki、Okumoto Yutaka、Abe Tomoko、Kumamaru Toshihiro、Tanaka Ayumi、Sakamoto Wataru、Kusaba Makoto
    • Journal Title

      J Exp Bot.

      Volume: 69 Issue: 5 Pages: 1027-1035

    • DOI

      10.1093/jxb/erx468

    • NAID

      120006466618

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access
  • [Journal Article] Mg-dechelation of chlorophyll a by Stay-Green activates chlorophyll b degradation through expressing Non-Yellow Coloring 1 in Arabidopsis thaliana2018

    • Author(s)
      Sato Tomoaki、Shimoda Yousuke、Matsuda Kaori、Tanaka Ayumi、Ito Hisashi
    • Journal Title

      Journal of Plant Physiology

      Volume: 222 Pages: 94-102

    • DOI

      10.1016/j.jplph.2018.01.010

    • NAID

      120006803940

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Deficiency of the Stroma-Lamellar Protein LIL8/PSB33 Affects Energy Transfer Around PSI in Arabidopsis2017

    • Author(s)
      Kato Yukako、Yokono Makio、Akimoto Seiji、Takabayashi Atsushi、Tanaka Ayumi、Tanaka Ryouichi
    • Journal Title

      Plant and Cell Physiology

      Volume: 58 Issue: 11 Pages: 2026-2039

    • DOI

      10.1093/pcp/pcx124

    • NAID

      120006533129

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] PCoM-DB Update: a Protein Co-Migration Database for photosynthetic organisms2017

    • Author(s)
      Takabayashi A, Takabayashi S, Takahashi K, Watanabe M, Uchida H, Murakami A, Fujita T, Ikeuchi M, Tanaka A
    • Journal Title

      Plant Cell Physiol.

      Volume: 58 Pages: pcw219-pcw219

    • DOI

      10.1093/pcp/pcw219

    • NAID

      120006374987

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Complete Chloroplast Genome Sequence of the Early-Divergent Green Alga Palmophyllum crassum2017

    • Author(s)
      Furukawa R, Kunugi M, Ihara K, Takabayashi A, Tanaka A
    • Journal Title

      Genome Announcements

      Volume: 5 Issue: 10

    • DOI

      10.1128/genomea.01745-16

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] The iron-sulfur cluster biosynthesis protein SUFB is required for chlorophyll synthesis, but not phytochrome signaling.2017

    • Author(s)
      Hu X, Page MT, Sumida A, Tanaka A, Terry MJ and Tanaka R
    • Journal Title

      Plant journal

      Volume: 89 Issue: 6 Pages: 1184-1194

    • DOI

      10.1111/tpj.13455

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] The SUFBC2D Complex is Required for the Biogenesis of All Major Classes of Plastid Fe-S Proteins2017

    • Author(s)
      Hu X, Kato Y, Sumida A, Tanaka A and Tanaka R
    • Journal Title

      Plant journal

      Volume: 90 Issue: 2 Pages: 235-248

    • DOI

      10.1111/tpj.13483

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] The non-Mendelian green cotyledon gene in soybean encodes a small subunit of Photosystem II.2017

    • Author(s)
      Kohzuma, K., Sato, Y., Ito, H., Okuzaki, A., Masuda, Y., Watanabe, M., Fukuoka, H., Yamatani, H., Kanazawa, A., Tabei, Y., Ikeuchi, M., Sakamoto, W., Tanaka, A., and Kusaba, M.
    • Journal Title

      Plant Physiology

      Volume: 173 Issue: 4 Pages: 2138-2147

    • DOI

      10.1104/pp.16.01589

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Chlorophyll a is a favorable substrate for Chlamydomonas Mg-dechelatase encoded by STAY-GREEN2016

    • Author(s)
      Matsuda Kaori、Shimoda Yousuke、Tanaka Ayumi、Ito Hisashi
    • Journal Title

      Plant Physiol Biochem

      Volume: 109 Pages: 365-373

    • DOI

      10.1016/j.plaphy.2016.10.020

    • NAID

      120006531975

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Arabidopsis STAY-GREEN , Mendel’s Green Cotyledon Gene, Encodes Magnesium-Dechelatase2016

    • Author(s)
      Shimoda Yousuke、Ito Hisashi、Tanaka Ayumi
    • Journal Title

      Plant Cell

      Volume: 28 Issue: 9 Pages: 2147-2160

    • DOI

      10.1105/tpc.16.00428

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Direct interaction with ACR11 is necessary for post-transcriptional control of GLU1-encoded ferredoxin-dependent glutamate synthase in leaves2016

    • Author(s)
      Takabayashi A, Niwata A, Tanaka A.
    • Journal Title

      Sci. Rep.

      Volume: - Issue: 1 Pages: 29668-29668

    • DOI

      10.1038/srep29668

    • NAID

      120005828479

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Simultaneous regulation of antenna size and photosystem I/II stoichiometry in Arabidopsis thaliana2016

    • Author(s)
      Jia Ting、Ito Hisashi、Tanaka Ayumi
    • Journal Title

      Planta

      Volume: 244 Issue: 5 Pages: 1041-1053

    • DOI

      10.1007/s00425-016-2568-5

    • NAID

      120006318735

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Evolution of Green Plants Accompanied Changes in Light-Harvesting Systems2016

    • Author(s)
      Kunugi M, Satoh S, Ihara K, Shibata K, Yamagishi Y, Kogame K, Obokata J, Takabayashi A and Tanaka A
    • Journal Title

      Plant and Cell Physiology

      Volume: - Issue: 6 Pages: 1231-1243

    • DOI

      10.1093/pcp/pcw071

    • NAID

      120006024384

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Chlorophyll b degradation by chlorophyll b reductase under high-light conditions.2015

    • Author(s)
      Sato R, Ito H and Tanaka A
    • Journal Title

      Photosynth. Res.

      Volume: 126 Issue: 2-3 Pages: 249-259

    • DOI

      10.1007/s11120-015-0145-6

    • NAID

      120005745376

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] The Chlorophyll b Reductase NOL Participates in Regulating the Antenna Size of Photosystem II in Arabidopsis Thaliana.2015

    • Author(s)
      Jia T, Ito H and Tanaka A
    • Journal Title

      Procedia Chemistry

      Volume: 14 Pages: 422-427

    • DOI

      10.1016/j.proche.2015.03.057

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] PSI-NPQ in higher plants2018

    • Author(s)
      Makio Yokono, Atsushi Takabayashi, Junko Kishimoto, Tomomichi Fujita, Masakazu Iwai, Akio Murakami, Seiji Akimoto, Ayumi Tanaka
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] The effect of chlorophyll degradation by SGR on senescence2018

    • Author(s)
      Ying Chen, Yousuke Shimoda, Ayumi Tanaka, Hisashi Ito
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] クロロフィル a の Mg を脱離する酵素 SGR の触媒機構解析2018

    • Author(s)
      小畑大地、田中 歩、伊藤 寿
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ヒメツリガネゴケの PSI-PSII 超複合体の解析2018

    • Author(s)
      古川 亮、横野牧生、秋本誠志、藤田知道、高林厚史、田中 歩
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] クロロフィル合成酵素と光化学系 II アセンブリ複合体は相互作用をしているのか?2018

    • Author(s)
      高橋小春、明賀史純、小澤真一郎、篠崎一雄、高橋裕一郎、田中 歩、高林厚史、田中亮一
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Intracellular location of β-carotene ketolase in Haematococcus pluvialis2018

    • Author(s)
      Hyunseok Lim, Samuel Koh, Hisashi Ito, Szilvia Nagy, Taichi Takasuka, Ayumi Tanaka, Yoshiki Nishimura, Ryouichi Tanaka
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] イネstay-green突然変異体dye1の分子遺伝学的解析2018

    • Author(s)
      山谷浩史、上妻馨梨、中野道治、高見常明、加藤裕介、林 依子、門田有希、奥本 裕、阿部知子、熊丸敏博、田中 歩、坂本 亘、草場 信
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] SGR によるクロロフィル分解が引き起こすジャスモン酸とエチレンの増加2018

    • Author(s)
      木村円香、松浦英幸、田中 歩、伊藤 寿
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Photoprotection mechanisms of the drought-tolerant Jatropha curcas plant2018

    • Author(s)
      Helena Sapeta, Makio Yokono, Atsushi Takabayashi, Yoshifumi Ueno, Seiji Akimoto, Junko Kishimoto, Ayumi Tanaka, M. Margarida Oliveira, Ryouichi Tanaka
    • Organizer
      第59回日本植物生理学会年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 緑色植物のPSI-PSII超複合体2017

    • Author(s)
      横野牧生、高林厚史、岸本純子、藤田知道、岩井優和、村上明男、秋本誠志、田中歩
    • Organizer
      第8回日本光合成学会年会およびシンポジウム
    • Related Report
      2017 Annual Research Report
  • [Presentation] Mg-dechelatase contributes to the formation and the degradation of photosystems.2017

    • Author(s)
      Ayumi Tanaka
    • Organizer
      Chloroplast Metabolism and Photosynthesis Meeting
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Photoprotection mechanisms of the drought-tolerant Jatropha curcas plant2017

    • Author(s)
      Helena Sapeta, Makio Yokono, Atsushi Takabayashi, Seiji Akimoto, Junko Kishimoto, Ayumi Tanaka, M. Margarida Oliveira, Ryouichi Tanaka
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Deficiency of the Stroma-lamellar Protein LIL8/PSB33 Affects the Dynamics of Light-harvesting Complexes and Energy Transfer around Photosystem I in Arabidopsis2017

    • Author(s)
      Yukako Kato, Makio Yokono, Seiji Akimoto, Atsushi Takabayashi, Ayumi Tanaka, Ryouichi Tanaka
    • Organizer
      Taiwan-Japan Plant Biology 2017
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] クロロフィル代謝の機能と進化2017

    • Author(s)
      田中 歩
    • Organizer
      第 25 回 「光合成セミナー2017:反応中心と色素系の多様性」
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] ストロマラメラに局在するLight-harvesting-likeタンパク質LIL8の機能解析。光合成に関する植物(シロイヌナズナ)の変異体を生化学的、分光学的に解析2017

    • Author(s)
      Yukako Kato, Makio Yokono, Seiji Akimoto, Atsushi Takabayashi, Ayumi Tanaka, Ryouichi Tanaka
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Intracellular localization of β-carotene ketolase in Haematococcus pluvialis2017

    • Author(s)
      Samuel Wee Han Koh, Hisashi Ito, Ayumi Tanaka, Yoshiki Nishimura, Ryouichi Tanaka
    • Organizer
      日本植物学会第81回大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] The role of chlorophyll metabolism in the formation and degradation of photosystems2017

    • Author(s)
      Ayumi Tanaka
    • Organizer
      8th Asia and Oceania Conference on Photobiology
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] The function of SGR in the formation and degradation of photosystem II in Chlamydomonas reinhardtii.2017

    • Author(s)
      Ying Chen, Yousuke Shimoda, Hisashi Ito, Ayumi Tanaka
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2016 Annual Research Report
  • [Presentation] クロロフィル b 過剰蓄積植物株における細胞死の解析2017

    • Author(s)
      古川亮、高林厚史、田中歩
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2016 Annual Research Report
  • [Presentation] 窒素代謝制御因子 ACR11の生理的機能の解析2017

    • Author(s)
      高林厚史、庭田章弘、永森彩奈、田中歩
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2016 Annual Research Report
  • [Presentation] 光化学系 II アセンブリー因子 HCF173および LIL6は光化学系 II の修復に関与するか?2017

    • Author(s)
      坂田啓、秋山雄希、高林厚史、明賀史純、篠崎一雄、田中歩、田中 亮一
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2016 Annual Research Report
  • [Presentation] SGRL は光阻害を抑制することで 黄化芽生えの緑化に寄与する2017

    • Author(s)
      小畑大地、下田洋輔、田中歩、伊藤寿
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2016 Annual Research Report
  • [Presentation] シロイヌナズナにおける ELIP の 機能解析2017

    • Author(s)
      秋山雄希、横野牧生、秋本誠志、田中歩、田中亮一
    • Organizer
      第58回日本植物生理学会年会
    • Related Report
      2016 Annual Research Report
  • [Presentation] クラミドモナスのクロロフィル分解酵素SGRの機能解析2016

    • Author(s)
      松田香織、下田洋輔、伊藤寿、田中歩
    • Organizer
      第57回日本植物生理学会大会
    • Place of Presentation
      岩手大学上田キャンパス(盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] グルタミン酸合成を制御するタンパク質複合体の解析2016

    • Author(s)
      庭田章弘、高林 厚史、田中歩
    • Organizer
      第57回日本植物生理学会大会
    • Place of Presentation
      岩手大学上田キャンパス(盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] 緑色植物における光捕集系の進化2016

    • Author(s)
      古川亮、功刀基、井原邦夫、高林 厚史、田中歩
    • Organizer
      第57回日本植物生理学会大会
    • Place of Presentation
      岩手大学上田キャンパス(盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] シロイヌナズナの SGR によるクロロフィル分解制御2016

    • Author(s)
      大野滉平、下田洋輔、伊藤寿、田中歩
    • Organizer
      第57回日本植物生理学会大会
    • Place of Presentation
      岩手大学上田キャンパス(盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] Is the iron-sulfur cluster biosynthesis protein SufB involved in chlorophyll synthesis and phytochrome signaling?2016

    • Author(s)
      Xueyun Hu, Mike T. Page, Ayumi Tanaka, Matthew J. Terry, Ryouichi Tanaka
    • Organizer
      第57回日本植物生理学会大会
    • Place of Presentation
      岩手大学上田キャンパス(盛岡市)
    • Year and Date
      2016-03-18
    • Related Report
      2015 Annual Research Report
  • [Presentation] Mg-dechelatase initiates chlorophyll degradation and controls the gene expression of chlorophyll metabolism.2016

    • Author(s)
      Ayumi Tanaka
    • Organizer
      International Symposium on Plant Signaling and Behavior 2016
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Acclimation of the photosynthetic apparatus.2016

    • Author(s)
      Ayumi Tanaka
    • Organizer
      17th International Congress on Photosynthesis Research
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] シロイヌナズナにおける高バイオマス変異体の解析2016

    • Author(s)
      佐藤 智亮、高林 厚史、田中 歩
    • Organizer
      第34回日本植物細胞分子生物学会(上田)大会
    • Related Report
      2016 Annual Research Report
  • [Presentation] マグネシウム脱離酵素による植物の発育と遺伝子発現制御2015

    • Author(s)
      田中 歩
    • Organizer
      第38回日本分子生物学会年会、第88回日本生化学会大会合同大会
    • Place of Presentation
      神戸ポートアイランド(神戸市)
    • Year and Date
      2015-12-01
    • Related Report
      2015 Annual Research Report
  • [Presentation] Identification of Mg-dechelatase essential for the degradation of photosystems.2015

    • Author(s)
      田中 歩
    • Organizer
      Yamada Conference International Symposium on Dynamics and Regulation of Photosynthesis
    • Place of Presentation
      奈良春日野国際フォーラム(奈良市)
    • Year and Date
      2015-10-29
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] 酵素によるクロロフィルからのMgの脱離について2015

    • Author(s)
      伊藤寿、下田洋輔、 松田香織、田中歩
    • Organizer
      第23回光合成セミナー
    • Place of Presentation
      龍谷大学(京都市)
    • Related Report
      2015 Annual Research Report
  • [Presentation] 葉緑体機能改変によるステイグリーン植物の創出2015

    • Author(s)
      田中 歩
    • Organizer
      2015年度生物工学会北日本支部仙台シンポジウム「北日本から世界に発信する環境保全のためのバイオテクノロジー」
    • Place of Presentation
      エル・パーク仙台(仙台市)
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Book] 光と生命の事典2016

    • Author(s)
      田中 歩
    • Total Pages
      436
    • Publisher
      朝倉書店
    • Related Report
      2015 Annual Research Report
  • [Remarks] 北海道大学低温科学研究所生物適応研究室

    • URL

      http://www.lowtem.hokudai.ac.jp/plantadapt/top-j.html

    • Related Report
      2017 Annual Research Report
  • [Remarks] 北海道大学低温科学研究所生物適応研究室

    • URL

      http://www.lowtem.hokudai.ac.jp/plantadapt/index.html

    • Related Report
      2016 Annual Research Report
  • [Remarks] 生物適応研究室HP

    • URL

      http://www.lowtem.hokudai.ac.jp/plantadapt/index.html

    • Related Report
      2015 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi