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Study on the mechanism of seed- and green plant-vernalization and development of green plant-vernalization type Chinese cabbage

Research Project

Project/Area Number 15H04433
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Science in genetics and breeding
Research InstitutionNiigata University

Principal Investigator

Keiichi Okazaki  新潟大学, 自然科学系, 教授 (20270936)

Co-Investigator(Kenkyū-buntansha) 深井 英吾  新潟大学, 自然科学系, 助教 (00570657)
柿崎 智博  国立研究開発法人農業・食品産業技術総合研究機構, 野菜花き研究部門, 主任研究員 (30547229)
藤本 龍  神戸大学, 農学研究科, 准教授 (60620375)
板橋 悦子  国立研究開発法人農業・食品産業技術総合研究機構, 野菜花き研究部門, 研究員 (70783273)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥16,770,000 (Direct Cost: ¥12,900,000、Indirect Cost: ¥3,870,000)
Fiscal Year 2017: ¥4,680,000 (Direct Cost: ¥3,600,000、Indirect Cost: ¥1,080,000)
Fiscal Year 2016: ¥5,070,000 (Direct Cost: ¥3,900,000、Indirect Cost: ¥1,170,000)
Fiscal Year 2015: ¥7,020,000 (Direct Cost: ¥5,400,000、Indirect Cost: ¥1,620,000)
Keywords春化 / キャベツ / ハクサイ / 遺伝子発現 / エピゲノム解析 / エピゲノム / RNA-seq / 育種学 / イントログレッション
Outline of Final Research Achievements

We characterized vernalization requirement of 49 strains of oilseed rape, and developed the F2 population of Isuzu-natane (low vernalization requirement) × synthetic B. napus (strong vernalization requirement ). In addition, we developed a line that was introduced the region containing BoFLC 2 region derived from cabbage into the top of chromosome 2 of Chinese cabbage. We showed that the differences of expression level of BrFLC 1/2/3 in cabbage and Chinese cabbage may be related to the diversity of vernalization requirement in cabbage and Chinese cabbage cultivars. The RNA-seq analysis revealed that long non coding RNA was expressed on BoFLC2 locus by low temperature treatment. Our developed Chinese cabbage line showed delay of flowering in the winter cropping pattern, compared with ordinary Chinese cabbage cultivars, indicating that it can be used as a breeding material.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (18 results)

All 2018 2017 2016

All Journal Article (4 results) (of which Int'l Joint Research: 1 results,  Peer Reviewed: 4 results,  Open Access: 1 results) Presentation (14 results) (of which Int'l Joint Research: 3 results)

  • [Journal Article] The role of FLOWERING LOCUS C in vernalization of Brassica: the importance of vernalization research in the face of climate change2017

    • Author(s)
      Shea, DJ. E. Itabashi, S. Takada, E. Fukai, T. Kakizaki, R. Fujimoto and K. Okazaki
    • Journal Title

      Crop Pasture Sci.

      Volume: 69 Issue: 1 Pages: 30-39

    • DOI

      10.1071/cp16468

    • NAID

      120006546779

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] IntroMap: a signal analysis based method for the detection of genomic introgressions2017

    • Author(s)
      D. J. Shea, M. Shimizu, N. Nishida, E. Fukai, T. Abe, R. Fubimoto and K. Okazaki
    • Journal Title

      BMC Genetics

      Volume: 18 Issue: 1 Pages: 101-101

    • DOI

      10.1186/s12863-017-0568-5

    • NAID

      120006380397

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Epigenetic regulation of agronomical traits in Brassicaceae2017

    • Author(s)
      Itabashi Etsuko、Osabe Kenji、Fujimoto Ryo、Kakizaki Tomohiro
    • Journal Title

      Plant Cell Reports

      Volume: 37 Issue: 1 Pages: 87-101

    • DOI

      10.1007/s00299-017-2223-z

    • NAID

      120006546777

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Development of primer sets that can verify the enrichment of histone modifications, and their application to examining vernalization-mediated chromatin changes in <i>Brassica rapa</i> L.2016

    • Author(s)
      Kawanabe, T., Osabe, K., Itabash, E., Okazaki, K., Dennis, E.S., and Fujimoto, R.
    • Journal Title

      Genes & Genetic Systems

      Volume: 91 Issue: 1 Pages: 1-10

    • DOI

      10.1266/ggs.15-00058

    • NAID

      130005165461

    • ISSN
      1341-7568, 1880-5779
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Presentation] Brassica rapaにおける春化経路関連遺伝子の機能解析2018

    • Author(s)
      西田 菜美子; 高田 紗都子; 板橋 悦子; 宮路 直実; 安田 剛志; 藤本 龍
    • Organizer
      園芸学会平成30年度春季大会, 近畿大学, 2018, 03, 口頭発表
    • Related Report
      2017 Annual Research Report
  • [Presentation] 結球野菜の開花調節機構に関する研究の現状と今後の展望について2018

    • Author(s)
      藤本 龍; 高田 紗都子; 西田 菜美子; 板橋 悦子; 安田 剛志; 柿崎 智博; 宇野 雄一
    • Organizer
      園芸学会平成30年度春季大会, 近畿大学, 2018, 03, 口頭発表 (テーマセッション)
    • Related Report
      2017 Annual Research Report
  • [Presentation] キャベツの緑体春化におけるFLOWERING LOCUS Cの役割2018

    • Author(s)
      板橋 悦子; 柿崎 智博; 吹野 伸子; 岡崎 桂一; 藤本 龍; 小原 隆由
    • Organizer
      園芸学会平成30年度春季大会, 近畿大学, 2018, 03, 口頭発表 (テーマセッション)
    • Related Report
      2017 Annual Research Report
  • [Presentation] LncRNA BrFLC2as in Brassica rapa differs from Arabidopsis thaliana COOLAIR,2018

    • Author(s)
      Shea Daniel; 高田 紗都子; 西田 菜美子; 板橋 悦子; 清水 元樹; 岡崎 桂一; 藤本 龍
    • Organizer
      日本育種学会第133回講演会, 九州大学, 2018, 03, ポスター発表
    • Related Report
      2017 Annual Research Report
  • [Presentation] Brassica oleracea FLC2 領域を移入交雑で導入したBrassica rapa の特性解析2017

    • Author(s)
      シェイ ダニエル、戸丸 祐貴、 板橋 悦子、宮﨑 俊夫、柿崎 智博、清水 元樹、藤本 龍、深井 英吾、岡崎 桂一
    • Organizer
      日本育種学会第132回講演会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Phenotyping and analysis of FLC2 expression in a hybrid introgressed Brassica rapa and its parental cultivar2017

    • Author(s)
      Shea DJ
    • Organizer
      KAAB International Symposium 2017, Niigata, Japan.
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Brassica rapa L.における春化によるFLCのエピジェネティックな修飾変化の系統間比較2017

    • Author(s)
      高田 紗都子; 板橋 悦子; 宮路 直実; 安田 剛志; 藤本 龍
    • Organizer
      園芸学会平成29年度秋季大会, 酪農学園大学, 2017, 09, 口頭発表
    • Related Report
      2017 Annual Research Report
  • [Presentation] IntroMap - A bioinformatics-based method for the detection of genomic regions of introgressive hybridization2016

    • Author(s)
      Shea DJ, Fukai E, Okazaki K
    • Organizer
      Brassica 2016, which combines the 20th Crucifer Genetics Conference, and the 19th Australian Research Assembly on Brassicas, 3 - 6 October 2016; Melbourne Australia, Poster presentation
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] The epigenetic regulation of FLC expression by vernalization in Brassica rapa L.2016

    • Author(s)
      Satoko Takada; Etsuko Itabashi; Naomi Miyaji; Takeshi Takasaki-Yasuda; Kenji Osabe; Elizabeth S. Dennis; Ryo Fujimoto
    • Organizer
      Brassica 2016, Oct, Melbourne Australia, Poster Presentation
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Brassica rapa L.の開花期の決定におけるFRIGIDAとFLOWERING LOCUS Cの役割2016

    • Author(s)
      高田 紗都子; 板橋 悦子; 宮路 直実; 安田 剛志; 藤本 龍
    • Organizer
      日本育種学会第130回講演会, 鳥取大学, 2016, 09, 口頭発表
    • Related Report
      2016 Annual Research Report
  • [Presentation] ハクサイにおけるエピゲノム解析2016

    • Author(s)
      藤本 龍; 高橋 聡史; 板橋 悦子; 鈴木 穣; 関 原明
    • Organizer
      日本育種学会第130回講演会, 鳥取大学, 2016, 09, 口答発表 (ワークショップ)
    • Related Report
      2016 Annual Research Report
  • [Presentation] Brassica rapa L.における開花関連遺伝子FRIGIDA の発現解析および全長配列の決定2016

    • Author(s)
      高田 紗都子; 板橋 悦子; 宮路 直実; 安田 剛志; 藤本 龍
    • Organizer
      園芸学会平成28年度秋季大会, 名城大学, 2016, 09, 口頭発表
    • Related Report
      2016 Annual Research Report
  • [Presentation] Brassica rapa L.における春化によるFLOWERING LOCUS C のエピジェネティックな転写制御について2016

    • Author(s)
      高田 紗都子; 板橋 悦子; 宮路 直実; 清水 元樹; 安田 剛志; 藤本 龍
    • Organizer
      園芸学会平成28年度秋季大会, 名城大学, 2016 ,09, ポスター発表
    • Related Report
      2016 Annual Research Report
  • [Presentation] Brassica rapa L.における春化経路関連遺伝子FLOWERING LOCUS C の発現解析およびエピジェネティックな転写制御について2016

    • Author(s)
      高田 紗都子; 板橋 悦子; 宮路 直美; 安田 剛志; 藤本 龍
    • Organizer
      平成28 年度園芸学会近畿支部兵庫大会, 神戸大学, 2016, 08, 口頭発表
    • Related Report
      2016 Annual Research Report

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Published: 2015-04-16   Modified: 2021-01-27  

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