• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Pathogenicity of viroid - circular RNA pathogen; Analysis of destructive effects of viroid infection on a host miRNA/gene expression network

Research Project

Project/Area Number 15H04455
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Plant protection science
Research InstitutionHirosaki University

Principal Investigator

SANO Teruo  弘前大学, 農学生命科学部, 教授 (30142699)

Co-Investigator(Kenkyū-buntansha) 種田 晃人  弘前大学, 理工学研究科, 准教授 (70332492)
葛西 厚史  弘前大学, 農学生命科学部, 研究員 (80633982)
Research Collaborator Jaroslav Matoušek  Institute of Plant Molecular Biology, Biology Centre ASCR v.v.i
Adkar Purushothama CR  Université de Sherbrooke, RNA Group/Groupe ARN
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥16,900,000 (Direct Cost: ¥13,000,000、Indirect Cost: ¥3,900,000)
Fiscal Year 2017: ¥3,380,000 (Direct Cost: ¥2,600,000、Indirect Cost: ¥780,000)
Fiscal Year 2016: ¥3,640,000 (Direct Cost: ¥2,800,000、Indirect Cost: ¥840,000)
Fiscal Year 2015: ¥9,880,000 (Direct Cost: ¥7,600,000、Indirect Cost: ¥2,280,000)
Keywordsウイロイド / RNAサイレンシング / DCL2 / DCL4 / miR398a-3p / SOD1 / CCS1 / マイクロRNA / 遺伝子発現ネットワーク / 環状RNA / ジベレリンβ水酸化酵素 / AGO2 / RDR6 / 形質転換トマト
Outline of Final Research Achievements

We analyzed adverse effects of viroid infection upon the network of host gene expression and found that accumulation of a viroid-specific small RNA derived from the position 39-59 of PSTVd genome caused down-regulation of callose synthase gene (CalS11-like) expression through RNA silencing pathway. We also developed novel viroid-resistant tobacco plants expressing viroid-specific small RNAs and identified a key nucleotide which attenuates PSTVd pathogenicity.
RNAi-mediated down-regulation of DCL2 and DCL4 made tomato plants susceptible to viroid infection. The plants infected with PSTVd produced severe systemic necrosis and died 3 to 4 months after infection, in which the expression level of CCS1, SOD1, and miR398 was abnormally elevated.
Although plants generate reactive oxygen species by fundamental innate immunity to counteract viroid infection, it became clear that abnormality in RNA silencing mechanism disturbs the defense mechanism and intensifies disease symptoms.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (41 results)

All 2018 2017 2016 2015 Other

All Int'l Joint Research (4 results) Journal Article (12 results) (of which Int'l Joint Research: 9 results,  Peer Reviewed: 11 results,  Open Access: 4 results,  Acknowledgement Compliant: 5 results) Presentation (24 results) (of which Int'l Joint Research: 7 results,  Invited: 5 results) Book (1 results)

  • [Int'l Joint Research] 中国農業科学院植物保護研究所(中国)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] 植物科学研究所(チェスケ・ブジェロビッチ)(チェコ)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] Institute of Plant Molecular Biology(チェコ)

    • Related Report
      2015 Annual Research Report
  • [Int'l Joint Research] Universite de Sherbrooke(Canada)

    • Related Report
      2015 Annual Research Report
  • [Journal Article] ICTV Consortium ICTV Virus Taxonomy Profile: Avsunviroidae2018

    • Author(s)
      Di Serio D, Li S-F, Matousek J, Owens RA, Pallas V, Randles JW, Sano T, Verhoeven JThJ, Vidalakis G, Flores R
    • Journal Title

      J Gen Virol

      Volume: 99

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] A point-mutation of Coleus blumei viroid 1 switches the potential to transmit through seed2018

    • Author(s)
      Tsushima T, Sano T
    • Journal Title

      J Gen Virol.

      Volume: 99 Issue: 3 Pages: 393-401

    • DOI

      10.1099/jgv.0.001013

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Molecular diversity among viroids infecting chrysanthemum in India2017

    • Author(s)
      Adkar-Purushothama CR, Chennappa G, Poornachandra Rao K, Sreenivasa MY, Maheshwar PK, Nagendra Prasad MN, Sano T.
    • Journal Title

      Virus Genes

      Volume: 53 Pages: 636-642

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Global transcriptomic changes induced by infection of cucumber (Cucumis sativus L.) with mild and severe variants of hop stunt viroid2017

    • Author(s)
      Xia CJ, Li SF, Hou WY, Fan ZF, Xiao H, Lu MG, Sano T and Zhang ZX
    • Journal Title

      Front. Microbiol.

      Volume: 8 Pages: 2427-2427

    • DOI

      10.3389/fmicb.2017.02427

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Characterization of host-dependent mutations of Apple fruit crinkle viroid replicating in newly identified experimental hosts suggests maintenance of stem-loop structures in the left-hand half of the molecule is important for replication2017

    • Author(s)
      Suzuki T, Fujibayashi M, Hataya T, Taneda A, He Y-H, Tsushima T, Duraisamy GS, Siglova K, Matousek J, Sano T
    • Journal Title

      J Gen Virol

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Propagation and some physiological effects of Citrus bark cracking viroid and Apple fruit crinkle viroid in multiple infected hop (Humulus lupulus L.)2017

    • Author(s)
      Matousek J, Siglova K, Jakze J, Radisek S, Brass Joseph RJ, Tsushima T, Gucek T, Duraisamy GS, Sano T and Steger G
    • Journal Title

      J Plant Physiol

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Int'l Joint Research
  • [Journal Article] Symptoms and molecular characterization of apple dimple fruit viroid isolates from apples in Japan2017

    • Author(s)
      Kasai H, Ito T, Sano T
    • Journal Title

      J Gen Pl Pathol

      Volume: 印刷中

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Viral pathogens occurring in fig-mosaic diseased trees in Greece2016

    • Author(s)
      Kaponi MS, Vellios EK, Fillipou KS, Sano T
    • Journal Title

      PSJ Plant Virus Disease Workshop Report (special edition)

      Volume: 12 Pages: 30-42

    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Journal Article] Small RNA derived from the virulence modulating region of the Potato spindle tuber viroid silences callose synthase genes of tomato plants2015

    • Author(s)
      Adkar-Purushothama, C.R., C. Brosseau, T. Giguere, T. Sano, P. Moffett, J.P. Perreault
    • Journal Title

      The Plant Cell

      Volume: 27 Issue: 8 Pages: 2178-2194

    • DOI

      10.1105/tpc.15.00523

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] Analysis of small RNA production patterns among the two potato spindle tuber viroid variants in tomato plants2015

    • Author(s)
      Adkar-Purushothama, C.R., J.P. Perreault, T. Sano
    • Journal Title

      Genomics Data

      Volume: 6 Pages: 65-66

    • DOI

      10.1016/j.gdata.2015.08.008

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research / Acknowledgement Compliant
  • [Journal Article] RNAi mediated inhibition of viroid infection in transgenic plants expressing viroid-specific small RNAs derived from various functional domains2015

    • Author(s)
      Charith Raj Adkar-Purushothama, Atsushi Kasai, Kohei Sugawara, Hideki Yamamoto, Yuto Yamazaki, Ying-Hong He, Nobuyuki Takada, Hideki Goto, Sahori Shindo, Takeo Harada and Teruo Sano
    • Journal Title

      Scientific reports

      Volume: 5 Issue: 1 Pages: 17949-17949

    • DOI

      10.1038/srep17949

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Open Access / Int'l Joint Research
  • [Journal Article] Molecular dissection of a dahlia isolate of potato spindle tuber viroid inciting a mild symptoms in tomato2015

    • Author(s)
      Tsushima D, Tsushima T, Sano T.
    • Journal Title

      Virus Research

      Volume: 214 Pages: 11-18

    • DOI

      10.1016/j.virusres.2015.12.018

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Presentation] ウイロイド感染植物の矮化・葉巻症状に関連する宿主遺伝子の解析2018

    • Author(s)
      鈴木貴大、林勇作、菅原康平、藤林美里、葛西厚史、佐野輝男
    • Organizer
      平成30年度日本植物病理学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] トマトのRDR6はジャガイモやせいもウイロイド(PSTVd)の初期増殖と茎頂分裂組織内部への侵入を抑制する2018

    • Author(s)
      直井崇、畑谷達児、葛西厚史、佐野輝男
    • Organizer
      平成30年度日本植物病理学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] Variation, molecular structure and pathogenicity of viroid - a non-coding RNA pathogen2017

    • Author(s)
      Sano T
    • Organizer
      ISF/ISHI-Veg Meetings, Osaka, TKP Shin-Osaka Business Center
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] ジャガイモやせいもウイロイドのトマトに対する弱毒性を特徴づける塩基変異の評価2017

    • Author(s)
      対馬大希、佐野輝男
    • Organizer
      平成29年度日本植物病理学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] リンゴゆず果ウイロイドホップ分離株及びカキ分離株のトマトでの病原性解析2017

    • Author(s)
      鈴木貴大、藤林美里、種田晃人、畑谷達児、佐野輝男
    • Organizer
      平成29年度日本植物病理学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] トマトのDCL2とDCL4はジャガイモやせいもウイロイド(PSTVd)の初期増殖と病徴発現を抑制する2017

    • Author(s)
      池田翔、葛西厚史、種田晃人、奥田真生、鈴木貴大、佐野輝男
    • Organizer
      平成29年度日本植物病理学会大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] リンゴゆず果ウイロイドホップ分離株のトマトにおける病原性解析2017

    • Author(s)
      鈴木貴大、藤林美里、畑谷達児、佐野輝男
    • Organizer
      平成29年度日本植物病理学会東北部会
    • Related Report
      2017 Annual Research Report
  • [Presentation] ウイロイド感染で生じる壊疽症状について2017

    • Author(s)
      佐野輝男、鈴木貴大、藤林美里
    • Organizer
      平成29年度日本植物病理学会東北部会
    • Related Report
      2017 Annual Research Report
  • [Presentation] リンゴさび果ウイロイドの草本宿主植物に関する再検討2016

    • Author(s)
      鈴木貴大, 藤林美里, 山本英樹, 赫英紅, 佐野輝男
    • Organizer
      平成28年度日本植物病理学会東北部会
    • Place of Presentation
      福島市コラッセふくしま
    • Year and Date
      2016-09-29
    • Related Report
      2016 Annual Research Report
  • [Presentation] ジャガイモやせいもウイロイドの病原性に影響を及ぼす左末端及び病原性領域内の塩基変異の分析2016

    • Author(s)
      対馬大希, 畑谷達児, 佐野輝男
    • Organizer
      平成28年度日本植物病理学会東北部会
    • Place of Presentation
      福島市コラッセふくしま
    • Year and Date
      2016-09-29
    • Related Report
      2016 Annual Research Report
  • [Presentation] ジャガイモやせいもウイロイド-ダリア株の左末端及び病原性領域の塩基変異と病原性比較分析2016

    • Author(s)
      対馬大希, 佐野輝男
    • Organizer
      平成28年度日本植物病理学会大会
    • Place of Presentation
      岡山市、岡山コンベンションセンター
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] RNAiでRNAサイレンシングキー因子遺伝子発現をノックダウンした形質転換トマト系統のウイロイド感受性の分析2016

    • Author(s)
      佐野輝男, 葛西厚史, 菅原康平, 成田和子, 八木竜也, 池田翔, 奥田真生, 林勇作, 直井崇, 藤林美里
    • Organizer
      平成28年度日本植物病理学会大会
    • Place of Presentation
      岡山市、岡山コンベンションセンター
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] リンゴゆず果ウイロイドカキおよびホップ分離株の草本性植物での遺伝的安定性の解析2016

    • Author(s)
      鈴木貴大, 藤林美里, 畑谷達児, 佐野輝男
    • Organizer
      平成28年度日本植物病理学会大会
    • Place of Presentation
      岡山市、岡山コンベンションセンター
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] 人工組換え実験によるコリウスブルメイウイロイド-1及び-5の分子内ループの機能解析2016

    • Author(s)
      対馬太郎, 齊藤瑠衣, 佐野輝男
    • Organizer
      平成28年度日本植物病理学会大会
    • Place of Presentation
      岡山市、岡山コンベンションセンター
    • Year and Date
      2016-03-21
    • Related Report
      2015 Annual Research Report
  • [Presentation] リンゴくぼみ果ウイロイド(ADDFVd)とリンゴに感染する他の2種既知ウイロイドとのリンゴにおける発現病徴の比較2016

    • Author(s)
      伊藤伝,佐野輝男
    • Organizer
      第69回北日本病害虫研究発表会
    • Place of Presentation
      札幌市、北海道立道民活動センタービル かでる2・7
    • Year and Date
      2016-02-28
    • Related Report
      2015 Annual Research Report
  • [Presentation] ウイロイド-ノンコーディングRNA病原-の分子構造と病原性2016

    • Author(s)
      佐野輝男
    • Organizer
      日本生物工学会東北支部
    • Place of Presentation
      弘前大学農学生命科学部
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] ジャガイモやせいもウイロイド-ダリア株の弱毒性を特徴づける変異の解析2015

    • Author(s)
      対馬大希,佐野輝男
    • Organizer
      平成27年度日本植物病理学会東北部会
    • Place of Presentation
      仙台市、東北大学
    • Year and Date
      2015-09-28
    • Related Report
      2015 Annual Research Report
  • [Presentation] リンゴゆず果ウイロイド(AFCVd)ホップ、カキ分離株の感染性比較解析2015

    • Author(s)
      鈴木貴大,Park Chanhwhan,藤林美里,畑谷達児,Lim Hyoun-Sub,佐野輝男
    • Organizer
      平成27年度日本植物病理学会東北部会
    • Place of Presentation
      仙台市、東北大学
    • Year and Date
      2015-09-28
    • Related Report
      2015 Annual Research Report
  • [Presentation] Analysis of genetic stability and seed transmission of Coleus blumei viroid 1 variants with different internal loop structures2015

    • Author(s)
      Tsushima, T., T. Sano
    • Organizer
      International Conference on Viroids and Viroid-Like RNAs
    • Place of Presentation
      Ceske Budejovice, Czech Republic
    • Year and Date
      2015-06-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Molecular characterization of mulberry small circular RNA: a new species with a nature of satellite RNA showing hammerhead and new hairpin-like ribozyme activity2015

    • Author(s)
      Li, S., Q. Lu, K. Sagawa, B. Navarro, F. Di Serio, T. Sano, T. Tsushima, Y. Kuai, W. Wang, Z. Wu, L. Xie
    • Organizer
      International Conference on Viroids and Viroid-Like RNAs
    • Place of Presentation
      Ceske Budejovice, Czech Republic
    • Year and Date
      2015-06-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Systemic accumulation and pathogenicity of Potato spindle tuber viroid is associated with the correlation between the right-hand half and the left-hand half of the molecule2015

    • Author(s)
      Tsushima, D., T. Sano
    • Organizer
      International Conference on Viroids and Viroid-Like RNAs
    • Place of Presentation
      Ceske Budejovice, Czech Republic
    • Year and Date
      2015-06-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Propagation characteristics of hop isolate of Citrus bark cracking viroid and its compatibility to other viroids during primary infections of Humulus lupulus cv. Osvald's 722015

    • Author(s)
      Matousek, J.,K. Siglova, J. Jakse, S. Radisek, R. Piernikarczyk, T. Gucek, G. Duraisamy, P. Svoboda, T. Sano, G. Steger
    • Organizer
      International Conference on Viroids and Viroid-Like RNAs
    • Place of Presentation
      Ceske Budejovice, Czech Republic
    • Year and Date
      2015-06-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Transgenic Nicotiana benthamiana expressing viroid-specific small RNAs derived from hotspot regions of various functional domains delays Potato spindle tuber viroid infection2015

    • Author(s)
      Adkar-Purushothama, C.R., A. Kasai, K. Sugawara, H. Yamamoto, Y. Yamazaki, Y-H. He, N. Takada, H. Goto, S. Shindo, T. Harada, T. Sano
    • Organizer
      International Conference on Viroids and Viroid-Like RNAs
    • Place of Presentation
      Ceske Budejovice, Czech Republic
    • Year and Date
      2015-06-25
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] Viroids and Viroid Diseases in Asia2015

    • Author(s)
      Sano, T., T. Tsushima, D. Tsushima, M. Fujibayashi, T. Suzuki, C.R. Adkar-Purushothama, S. Li
    • Organizer
      23rd International conference on virus and other graft transmissible diseases of fruit crops
    • Place of Presentation
      Morioka, Japan
    • Year and Date
      2015-06-08
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Book] Hop stunt viroid, Chapter 19, pp.119-210. in Viroids and Satellites (Eds. Hadidi, A. et al.)2017

    • Author(s)
      Hataya T, Tsushima T, Sano T.
    • Total Pages
      716
    • Publisher
      Academic Press
    • Related Report
      2017 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2022-10-19  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi