• Search Research Projects
  • Search Researchers
  • How to Use
  1. Back to previous page

Chemically reactive oligonucleotides for site-specific modification of RNA and artificial RNA editing

Research Project

Project/Area Number 15H04633
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Chemical pharmacy
Research InstitutionKyushu University

Principal Investigator

Sasaki Shigeki  九州大学, 薬学研究院, 教授 (10170672)

Co-Investigator(Renkei-kenkyūsha) TANIGUCHI Yosuke  九州大学, 大学院薬学研究院, 准教授 (00452714)
FUCHI Yasufumi  九州大学, 大学院薬学研究院, 助教 (40748795)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥17,160,000 (Direct Cost: ¥13,200,000、Indirect Cost: ¥3,960,000)
Fiscal Year 2017: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2016: ¥5,200,000 (Direct Cost: ¥4,000,000、Indirect Cost: ¥1,200,000)
Fiscal Year 2015: ¥6,760,000 (Direct Cost: ¥5,200,000、Indirect Cost: ¥1,560,000)
Keywords遺伝子発現制御 / RNA / DNA / 人工核酸 / オリゴヌクレオチド / 部位特異的RNA修飾 / 薬学 / 有機化学 / 核酸 / 分子認識 / 選択的化学修飾 / 官能基転移 / 官能基転移反応
Outline of Final Research Achievements

This study was aimed at the development of the oligodeoxynucleotides to selectively modify RNA with a high base- and sequence selectivity, and their application to regulate gene the translation.As a result, a selective acylation of the 2’-hydroxy group of the RNA molecules has been achieved by the reactive oligonucleotide incorporating a new nucleobase analog as a catalyst of the acyl transfer.In addition, new nucleoside analogs have been contracted with the indolin skeleton, which were incorporated into the oligonucleotides for the selective acylation of the amino group of RNA bases by the activation of photo-irradiation.n order to evaluate the effect of the modification of RNA base, non-cell translation system has been established based on the use of synthesized mRNA, in which produced peptides are easily analyzed by gel-analysis as well as MS measurement. In conclusion, this study has successfully established oligonucleotide basis for the artificial regulation of gene expression.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (52 results)

All 2018 2017 2016 2015 Other

All Journal Article (10 results) (of which Peer Reviewed: 9 results,  Open Access: 1 results,  Acknowledgement Compliant: 8 results) Presentation (36 results) (of which Int'l Joint Research: 9 results,  Invited: 6 results) Book (4 results) Remarks (2 results)

  • [Journal Article] Luminescent europium sensors for specific detection of 8-oxo-dGTP by time-gated fluorescence2018

    • Author(s)
      Fuchi Yasufumi、Fukuda Takashi、Sasaki Shigeki
    • Journal Title

      Bioorganic & Medicinal Chemistry

      Volume: 印刷中 Issue: 12 Pages: 3254-3260

    • DOI

      10.1016/j.bmc.2018.04.052

    • Related Report
      2017 Annual Research Report
    • Peer Reviewed
  • [Journal Article] DNA cleavage at the AP site via β-elimination mediated by the AP site-binding ligands2016

    • Author(s)
      Yukiko S. Abe, Shigeki Sasaki
    • Journal Title

      Bioorganic & Medicinal Chemistry

      Volume: 24 Issue: 4 Pages: 910-914

    • DOI

      10.1016/j.bmc.2016.01.016

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access / Acknowledgement Compliant
  • [Journal Article] Recognition and detection of 8-oxo-rG in RNA using the DNA/OMeRNAchimera probes containing fluorescent adenosine-diazaphenoxazine analogue2016

    • Author(s)
      Koga Yohie, Taniguchi Yosuke, Kikukawa Yoshiya, Sasaki Shigeki
    • Journal Title

      Bioorg. Med. Chem.

      Volume: 24 Issue: 6 Pages: 1308-1313

    • DOI

      10.1016/j.bmc.2016.02.001

    • Related Report
      2016 Annual Research Report 2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Efficient Thymidine-Selective DNA Interstrand Photo-activated Crosslinking by the 6-Thioguanine Connected <i>via</i> an Ethylene-Linker to the 2′-Deoxyribose Unit2016

    • Author(s)
      Nishioka Takamasa, Oshiro Ikuya, Onizuka Kazumitsu, Taniguchi Yosuke and Sasaki S
    • Journal Title

      Chemical and Pharmaceutical Bulletin

      Volume: 64 Issue: 9 Pages: 1315-1320

    • DOI

      10.1248/cpb.c16-00310

    • NAID

      130005261564

    • ISSN
      0009-2363, 1347-5223
    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Synthetic Receptor Molecules for Selective Fluorescent Detection of 8-oxo-dGTP inAqueous Media2016

    • Author(s)
      Fuchi Yasufumi, Fukuda Takashi, Sasaki Shigeki
    • Journal Title

      Org. Biomol. Chem.

      Volume: 14 Issue: 33 Pages: 7949-7955

    • DOI

      10.1039/c6ob01485b

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Aminopyridinyl-pseudodeoxycytidine derivatives selectively stabilize antiparalleltriplex DNA with multiple CG inversion sites2016

    • Author(s)
      Okamura Hidenori, Taniguchi Yosuke, Sasaki Shigeki
    • Journal Title

      Angew. Chem. Int. Ed.

      Volume: 128 Issue: 40 Pages: 12633-12637

    • DOI

      10.1002/ange.201606136

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Enhancement of TFO Triplex Formation by Conjugation with Pyrene <i>via</i> Click Chemistry2015

    • Author(s)
      Taniguchi Y, Tomizaki A, Matsueda N, Okamura H, Sasaki S
    • Journal Title

      Chemical and Pharmaceutical Bulletin

      Volume: 63 Issue: 11 Pages: 920-926

    • DOI

      10.1248/cpb.c15-00570

    • NAID

      130005105722

    • ISSN
      0009-2363, 1347-5223
    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Stabilization of the i-motif structure by the intra-strand cross-link formation.2015

    • Author(s)
      K. Kikuta, H. Piao, J. Brazier, ,Y. Taniguchi, K.Onizuka, F. Nagatsugi, S. Sasaki
    • Journal Title

      Bioorg. Med. Chem. Lett.

      Volume: 25 Issue: 16 Pages: 3307-3310

    • DOI

      10.1016/j.bmcl.2015.05.064

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed
  • [Journal Article] Site-specific modification of the 6-amino group ofadenosine in RNA by an inter-strand functionality-transfer reaction using an S-functionalized-4-thiothymidine2015

    • Author(s)
      Oshiro I. Jitsuzaki D. Onizuka K. Nishimoto A. Taniguchi Y. and Sasaki S
    • Journal Title

      ChemBioChem,

      Volume: 16 Issue: 8 Pages: 1190-1198

    • DOI

      10.1002/cbic.201500084

    • Related Report
      2015 Annual Research Report
    • Peer Reviewed / Acknowledgement Compliant
  • [Journal Article] Strong Positive Cooperativity in Binding to the A3T3 Repeat by Hoechst 33258Derivatives Attaching the Quinoline Units at the end of a Branched Linker2015

    • Author(s)
      Koda H., Brazier J., Onishi I., Sasaki S.
    • Journal Title

      Bioorg. Med. Chem

      Volume: 23 Issue: 15 Pages: 4583-4590

    • DOI

      10.1016/j.bmc.2015.05.056

    • Related Report
      2015 Annual Research Report
    • Acknowledgement Compliant
  • [Presentation] 光誘起能をもつRNAアシル化反応の検討2018

    • Author(s)
      菊田 健司 Jan BARTA 谷口 陽祐 佐々木 茂貴
    • Organizer
      日本薬学会大138年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] RNA糖部2'位OH基を配列特異的に修飾する人工核酸の開発2018

    • Author(s)
      北﨑 健太郎 高崎 隼颯 谷口 陽祐 佐々木 茂貴
    • Organizer
      日本薬学会大138年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] クロスリンクを RNA 部位特異的に形成する人工核酸の開発と翻訳制御の検討2017

    • Author(s)
      菊田健司, 谷口 陽祐, 佐々木 茂貴
    • Organizer
      日本薬学会第137回年会
    • Place of Presentation
      仙台市
    • Year and Date
      2017-03-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] 長鎖 mRNA に対する部位特異的化学修飾を利用した翻訳制御の評価2017

    • Author(s)
      松本卓也, 大城郁也, 實崎大地, 谷口 陽祐, 佐々木 茂貴
    • Organizer
      日本薬学会第137回年会
    • Place of Presentation
      仙台市
    • Year and Date
      2017-03-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] ゲノム標的化学の展開による機能性分子の創成2017

    • Author(s)
      佐々木 茂貴
    • Organizer
      日本薬学会第137年会
    • Place of Presentation
      仙台市
    • Year and Date
      2017-03-25
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] RNA 部位特異的化学修飾能を持つ官能基転移核酸の開発と遺伝情報制御法への応用2017

    • Author(s)
      大城郁也, 松本卓也, 實崎大地, 谷口 陽祐, 佐々木 茂貴
    • Organizer
      日本薬学会第137回年会
    • Place of Presentation
      仙台市
    • Year and Date
      2017-03-25
    • Related Report
      2016 Annual Research Report
  • [Presentation] 糖部 2' 位 OH 基を配列特異的に修飾する人工核酸の開発2017

    • Author(s)
      北﨑健太郎 高崎隼颯 谷口陽祐 佐々木茂貴
    • Organizer
      第34回日本薬学会九州支部大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] An Attempt to Photo-induced RNA Acetylation by Oligonucleotides Containing 1-Acetyl-7-nitroindolines2017

    • Author(s)
      Kenji Kikuta  Jan Barta  Yosuke Taniguchi  Shigeki Sasaki
    • Organizer
      The 1st Annual Meeting of Japan Society of Nucleic Acids Chemistry
    • Related Report
      2017 Annual Research Report
    • Int'l Joint Research
  • [Presentation] 誘起反応性アルキル架橋剤を用いたmRNAのアンチセンス阻害と i-motifの安定化2017

    • Author(s)
      菊田健司 朴海順  John Brazier 鬼塚和光  永次史  谷口陽祐  佐々木茂貴
    • Organizer
      日本核酸医薬学会第3回年会
    • Related Report
      2017 Annual Research Report
  • [Presentation] RNA糖部2'位のOH基を位置特異的に修飾する人工核酸の開発2017

    • Author(s)
      北﨑健太郎 高崎隼颯 谷口陽祐 佐々木茂貴
    • Organizer
      第54回化学関連支部合同九州大会
    • Related Report
      2017 Annual Research Report
  • [Presentation] RNAの2’位水酸基を配列特異的に修飾する人工核酸の開発2016

    • Author(s)
      高崎隼颯, 羽田野友里恵, 谷口 陽祐, 佐々木 茂貴
    • Organizer
      第33回日本薬学会九州支部大会
    • Place of Presentation
      鹿児島市
    • Year and Date
      2016-12-03
    • Related Report
      2016 Annual Research Report
  • [Presentation] クロスリンク核酸によるmRNAの化学修飾と翻訳への影響2016

    • Author(s)
      菊田健司,谷口陽祐,佐々木茂貴
    • Organizer
      第42回反応と合成の進歩シンポジウム
    • Place of Presentation
      静岡
    • Year and Date
      2016-11-07
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Pinpoint modification of 6-NH2 of the adenine in RNA by the functionality transfer oligonucleotides and its impact on reverse-transcription and translation2016

    • Author(s)
      Ikuya Oshiro, Daichi Jitsuzaki, Takuya Matsumoto, Yosuke Taniguchi and Shigeki Sasaki
    • Organizer
      第43回国際核酸化学シンポジウム
    • Place of Presentation
      熊本
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Oligonucleotides incorporating the 4-vinylpyrimidine derivatives to investigate the cross-link formation with mRNA2016

    • Author(s)
      Kenji Kikuta, Yosuke Taniguchi and Shigeki Sasaki
    • Organizer
      第43回国際核酸化学シンポジウム
    • Place of Presentation
      熊本
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Design of the reactive nucleoside analogs and its incorporation into the oligonucleotised for the site-selective chemicalmodification of the 2'-hydroxyl group of RNA2016

    • Author(s)
      Hayate Takasaki,Yurie Hadano, Yosuke Taniguchi and Shigeki Sasaki
    • Organizer
      第43回国際核酸化学シンポジウム
    • Place of Presentation
      熊本
    • Year and Date
      2016-09-27
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] Non-natural nucleoside derivatives for selective stabilization of the antiparallel triplex DNA with multiple inversion sites2016

    • Author(s)
      Hidenori Okamura, Yosuke Taniguchi andShigeki Sasaki
    • Organizer
      The First A3 Roundtable Meeting on Chemical Probe Research Hub
    • Place of Presentation
      福岡市
    • Year and Date
      2016-09-22
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] DNA の B-Z 構造遷移に同期しキラル変換する[5]ヘリセンリガンドのシンクロナイズド不斉誘起2016

    • Author(s)
      川良健祐、佐々木茂貴
    • Organizer
      第10回バイオ関連化学シンポジウム
    • Place of Presentation
      金沢市
    • Year and Date
      2016-09-07
    • Related Report
      2016 Annual Research Report
  • [Presentation] The Functionality Transfer Oligonucleotides for Site-Selective Modification of Cytidine or Adenine2016

    • Author(s)
      Shigeki Sasaki, Daichi Jitsuzaki, Ikuya Oshiro, Kazumitsu Onizuka, Atsushi Nishimoto, Yosuke Taniguchi
    • Organizer
      XXIIInternational Roundtable on Nucleosides Nucleotides and Nucleic Acids
    • Place of Presentation
      Paris
    • Year and Date
      2016-07-18
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] RNA部位特異的化学修飾能を持つ官能基転移核酸の開発と遺伝情報制御法への展開2016

    • Author(s)
      大城郁也,實崎大地,松本卓也,谷口陽祐,佐々木茂貴
    • Organizer
      第14回次世代を担う有機化学シンポジウム
    • Place of Presentation
      東京都渋谷区
    • Year and Date
      2016-05-27
    • Related Report
      2016 Annual Research Report
  • [Presentation] Development of pyrimidine nucleoside analogs as inducible cross-linking agents for nucleic acids2016

    • Author(s)
      Kenji Kikuta, Yosuke Taniguchi and Shigeki Sasaki
    • Organizer
      The 25th French-Japanese Symposium on Medicinal and Fine Chemistry
    • Place of Presentation
      東京都多摩市
    • Year and Date
      2016-05-15
    • Related Report
      2016 Annual Research Report
    • Int'l Joint Research
  • [Presentation] DNAリピート配列に選択的かつ協奏的に結合する低分子リガンドの創製2016

    • Author(s)
      村瀬裕貴、佐々木茂貴
    • Organizer
      日本薬学会第136回年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] 自己活性化能をもつピリミジン型クロスリンク核酸の開発2016

    • Author(s)
      菊田健司、谷口陽祐、佐々木茂貴
    • Organizer
      日本薬学会第136回年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] 塩基・部位特異的RNA化学修飾能を持つ官能基転移核酸による遺伝情報制御法の開発2016

    • Author(s)
      大城郁也、實崎大地、松本卓也、谷口陽祐、佐々木茂貴
    • Organizer
      日本薬学会第136回年会
    • Place of Presentation
      横浜
    • Year and Date
      2016-03-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] A New Strategy for Regulation of Gene Expression based on the Intelligent Oligonucleotides2016

    • Author(s)
      Shigeki Sasaki
    • Organizer
      The 8th Takeda Science Foundation Symposium on PharmaSciences
    • Place of Presentation
      大阪
    • Year and Date
      2016-01-21
    • Related Report
      2015 Annual Research Report
    • Int'l Joint Research / Invited
  • [Presentation] RNAの2’位水酸基を配列特異的に修飾する人工核酸の開発2016

    • Author(s)
      高崎隼颯、羽田野友里恵、谷口陽祐、佐々木茂貴
    • Organizer
      第53回化学関連支部合同九州大会
    • Place of Presentation
      北九州市
    • Related Report
      2016 Annual Research Report
  • [Presentation] 核酸医薬の現状と話題2016

    • Author(s)
      佐々木 茂貴
    • Organizer
      医工学フォーラム
    • Place of Presentation
      京都
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] ゲノム標的化学による創薬研究2016

    • Author(s)
      佐々木 茂貴
    • Organizer
      薬学シンポジウム2016 有機化学の先進的ビジョン
    • Place of Presentation
      金沢市
    • Related Report
      2016 Annual Research Report
    • Invited
  • [Presentation] Selective and cooperative binding of small molecular ligands to a GC repetitive site of DNA mediated by multiple complexationwith metal cations2015

    • Author(s)
      Hirotaka Murase, Shigeki Sasaki
    • Organizer
      PACIFICHEM2015
    • Place of Presentation
      ホノルル
    • Year and Date
      2015-12-15
    • Related Report
      2015 Annual Research Report
  • [Presentation] RNAの2’位水酸基を修飾する官能基転移核酸の開発2015

    • Author(s)
      高崎隼颯、羽田野友里恵、谷口陽祐、佐々木茂貴
    • Organizer
      第32回日本薬学会九州支部大会
    • Place of Presentation
      延岡
    • Year and Date
      2015-11-28
    • Related Report
      2015 Annual Research Report
  • [Presentation] 多官能化アントラセノン誘導体による繰り返しDNA配列への協奏的結合2015

    • Author(s)
      村瀬裕貴、佐々木茂貴
    • Organizer
      第41回反応と合成の進歩シンポジウム
    • Place of Presentation
      大阪
    • Year and Date
      2015-10-26
    • Related Report
      2015 Annual Research Report
  • [Presentation] The effect ofintra-strand cross-link formation on the stability of DNA i-motif2015

    • Author(s)
      Kenji Kikuta, PiaoHaishun, John Brazier, Kazumitsu Onizuka, Fumi Nagatsugi, Yosuke Taniguchi,Shigeki Sasaki
    • Organizer
      第42回国際核酸化学シンポジウム
    • Place of Presentation
      姫路
    • Year and Date
      2015-09-23
    • Related Report
      2015 Annual Research Report
  • [Presentation] 末端構造にキノリンを有するHoechst誘導体による二本鎖DNA繰り返し領域への強い協奏的結合2015

    • Author(s)
      江田裕則、John Brazier、佐々木茂貴
    • Organizer
      第9回バイオ関連化学シンポジウム
    • Place of Presentation
      熊本
    • Year and Date
      2015-09-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] 鎖内クロスリンク形成によるi-motifの安定化2015

    • Author(s)
      菊田健司、朴海順、John Brazier、鬼塚和光、永次史、谷口陽祐、佐々木茂貴
    • Organizer
      第9回バイオ関連化学シンポジウム
    • Place of Presentation
      熊本
    • Year and Date
      2015-09-10
    • Related Report
      2015 Annual Research Report
  • [Presentation] リピート配列を標的とした配列選択的集積性リガンドの開発2015

    • Author(s)
      村瀬裕貴、佐々木茂貴
    • Organizer
      第27回若手研究者のためのセミナー
    • Place of Presentation
      福岡
    • Year and Date
      2015-08-29
    • Related Report
      2015 Annual Research Report
    • Invited
  • [Presentation] 鎖内クロスリンク反応を用いたi-motifの安定化2015

    • Author(s)
      菊田健司、朴海順、John Brazier、鬼塚和光、永次史、谷口陽祐、佐々木茂貴
    • Organizer
      第52回化学関連支部合同九州大会
    • Place of Presentation
      北九州市
    • Year and Date
      2015-06-27
    • Related Report
      2015 Annual Research Report
  • [Presentation] 金属応答性ピリミジン型機能性核酸を用いたアデニン選択的RNA修飾法の開発2015

    • Author(s)
      大城郁也、實崎大地、西本篤史、鬼塚和光、谷口陽祐、佐々木茂貴
    • Organizer
      第25回万有福岡シンポジウム
    • Place of Presentation
      福岡
    • Year and Date
      2015-05-16
    • Related Report
      2015 Annual Research Report
  • [Book] 中分子創薬に資するペプチド・核酸・糖鎖の合成技術 第Ⅲ編 核酸2018

    • Author(s)
      佐々木茂貴
    • Total Pages
      317
    • Publisher
      シーエムシー出版
    • ISBN
      9784781313207
    • Related Report
      2017 Annual Research Report
  • [Book] 遺伝子医学MOOK(32) 難病研究up-to-date2017

    • Author(s)
      佐々木 茂貴
    • Total Pages
      288
    • Publisher
      メディカルドゥ
    • ISBN
      9784944157624
    • Related Report
      2017 Annual Research Report
  • [Book] 医療・診断・創薬の化学2017

    • Author(s)
      佐々木茂貴
    • Total Pages
      194
    • Publisher
      日本化学会 化学同人
    • ISBN
      9784759813845
    • Related Report
      2017 Annual Research Report
  • [Book] 核酸医薬の創製と応用展開2016

    • Author(s)
      佐々木茂貴
    • Total Pages
      278
    • Publisher
      シーエムシー出版
    • Related Report
      2015 Annual Research Report
  • [Remarks] Bioorganic and Synthetic Chemistry

    • URL

      http://bioorg.phar.kyushu-u.ac.jp/

    • Related Report
      2016 Annual Research Report
  • [Remarks] Bioorganic and Synthetic Chemistry

    • URL

      http://bioorg.phar.kyushu-u.ac.jp/index.html

    • Related Report
      2015 Annual Research Report

URL: 

Published: 2015-04-16   Modified: 2019-03-29  

Information User Guide FAQ News Terms of Use Attribution of KAKENHI

Powered by NII kakenhi