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Study of long noncoding RNAs in immune response

Research Project

Project/Area Number 15H04642
Research Category

Grant-in-Aid for Scientific Research (B)

Allocation TypeSingle-year Grants
Section一般
Research Field Biological pharmacy
Research InstitutionThe University of Tokyo

Principal Investigator

Akimitsu Nobuyoshi  東京大学, アイソトープ総合センター, 教授 (40294962)

Co-Investigator(Kenkyū-buntansha) 高屋 明子  千葉大学, 大学院薬学研究院, 准教授 (80334217)
神吉 康晴  東京大学, アイソトープ総合センター, 助教 (00534869)
Project Period (FY) 2015-04-01 – 2018-03-31
Project Status Completed (Fiscal Year 2017)
Budget Amount *help
¥16,770,000 (Direct Cost: ¥12,900,000、Indirect Cost: ¥3,870,000)
Fiscal Year 2017: ¥4,810,000 (Direct Cost: ¥3,700,000、Indirect Cost: ¥1,110,000)
Fiscal Year 2016: ¥6,240,000 (Direct Cost: ¥4,800,000、Indirect Cost: ¥1,440,000)
Fiscal Year 2015: ¥5,720,000 (Direct Cost: ¥4,400,000、Indirect Cost: ¥1,320,000)
KeywordsRNA / 感染 / 自然免疫 / RNA分解 / サルモネラ / ノンコーディングRNA / 自然免疫応答 / 核内RNA分解 / 遺伝子
Outline of Final Research Achievements

We found that nuclear RNA degradation pathway is dysregulated in response to Salmonella infection, causing the upregulation of nuclear long noncoding RNAs that are unstable in human nucleus of naïve cells. The nuclear long noncoding RNAs induced upon Salmonella infection are involved in the regulation of immune-related genes such as interferons. In addition, we showed that MTR4, an important component of nuclear RNA degradation pathways, are diminished after Salmonella infection. Our study clearly show the importance of nuclear RNA degradation pathway in immune response.

Report

(4 results)
  • 2017 Annual Research Report   Final Research Report ( PDF )
  • 2016 Annual Research Report
  • 2015 Annual Research Report
  • Research Products

    (9 results)

All 2018 2017 2016 Other

All Int'l Joint Research (2 results) Journal Article (1 results) (of which Peer Reviewed: 1 results,  Open Access: 1 results) Presentation (6 results) (of which Invited: 2 results)

  • [Int'l Joint Research] Aarhus大学(デンマーク)

    • Related Report
      2017 Annual Research Report
  • [Int'l Joint Research] Aarhus University(ベルギー)

    • Related Report
      2016 Annual Research Report
  • [Journal Article] A GC-rich sequence feature in the 3’ UTR directs UPF1-dependent mRNA decay in mammalian cells2017

    • Author(s)
      Imamachi N., Salam K.A., Suzuki Y. and Akimitsu N.
    • Journal Title

      Genome Research

      Volume: 27 Issue: 3 Pages: 407-418

    • DOI

      10.1101/gr.206060.116

    • Related Report
      2016 Annual Research Report
    • Peer Reviewed / Open Access
  • [Presentation] サルモネラ感染応答を制御する長鎖ノンコーディングRNA2018

    • Author(s)
      秋光信佳
    • Organizer
      第91回日本細菌学会総会
    • Related Report
      2017 Annual Research Report
    • Invited
  • [Presentation] 人工RNAの開発素材としての長鎖非コードRNA2018

    • Author(s)
      秋光信佳
    • Organizer
      日本薬学会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 熱ストレスによって哺乳動物細胞の核内で形成される新規のノンコーディングRNA含有核内構造体(Hi-body)の構造と機能に関する研究2017

    • Author(s)
      秋光信佳
    • Organizer
      第35回染色体ワークショップ・第16回核ダイナミクス研究会
    • Related Report
      2017 Annual Research Report
  • [Presentation] 長鎖ノンコーディングRNAから学ぶ人工RNAデザイン2017

    • Author(s)
      秋光信佳
    • Organizer
      ConBio2017
    • Related Report
      2017 Annual Research Report
  • [Presentation] 核内RNA分解抑制を通じた自然免疫応答制御2016

    • Author(s)
      今村亮俊、高屋明子、石田洋一、長浜正巳、鈴木穣、山本友子、秋光信佳
    • Organizer
      日本分子生物学会
    • Place of Presentation
      神奈川県横浜市パシフィコ横浜
    • Year and Date
      2016-11-30
    • Related Report
      2016 Annual Research Report
  • [Presentation] 核内長鎖ノンコーディングRNAを介した病原体抵抗機構2016

    • Author(s)
      今村亮俊、高屋明子、石田洋一、長浜正巳、鈴木穣、山本友子、秋光信佳
    • Organizer
      日本生化学会
    • Place of Presentation
      宮城県仙台市仙台国際センター
    • Year and Date
      2016-09-23
    • Related Report
      2016 Annual Research Report
    • Invited

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Published: 2015-04-16   Modified: 2019-03-29  

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